RNA–Protein interactions for RNA: ENST00000553866.1

CHGA-203, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 889 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-203ENST00000553866 NFKBIEO00221 500 aa16.29■□□□□ 0.2
CHGA-203ENST00000553866 PARP10Q53GL7 1025 aa16.29■□□□□ 0.2
CHGA-203ENST00000553866 C9orf131Q5VYM1 1079 aa16.29■□□□□ 0.2
CHGA-203ENST00000553866 PRPF40BQ6NWY9 871 aaKnown RBP16.29■□□□□ 0.2
CHGA-203ENST00000553866 OLFM4Q6UX06 510 aa16.29■□□□□ 0.2
CHGA-203ENST00000553866 ZNF526Q8TF50 670 aaPredicted RBP16.29■□□□□ 0.2
CHGA-203ENST00000553866 NPR1P16066 1061 aa16.28■□□□□ 0.2
CHGA-203ENST00000553866 EXOSC9Q06265 439 aaKnown RBP16.28■□□□□ 0.2
CHGA-203ENST00000553866 CRY2Q49AN0 593 aa16.28■□□□□ 0.2
CHGA-203ENST00000553866 CCDC30Q5VVM6 783 aa16.28■□□□□ 0.2
CHGA-203ENST00000553866 G2E3Q7L622 706 aa16.28■□□□□ 0.2
CHGA-203ENST00000553866 PPP1R42Q7Z4L9 355 aa16.28■□□□□ 0.2
CHGA-203ENST00000553866 C7orf43Q8WVR3 580 aa16.28■□□□□ 0.2
CHGA-203ENST00000553866 CNKSR1Q969H4 720 aa16.28■□□□□ 0.2
CHGA-203ENST00000553866 ISCA1Q9BUE6 129 aa16.28■□□□□ 0.2
CHGA-203ENST00000553866 UTP14AQ9BVJ6 771 aaKnown RBP16.28■□□□□ 0.2
CHGA-203ENST00000553866 RIC1Q4ADV7 1423 aa16.28■□□□□ 0.2
CHGA-203ENST00000553866 FER1L6Q2WGJ9 1857 aa16.27■□□□□ 0.2
CHGA-203ENST00000553866 CCER2I3L3R5 266 aa16.27■□□□□ 0.2
CHGA-203ENST00000553866 HSP90AB3PQ58FF7 597 aa16.27■□□□□ 0.2
CHGA-203ENST00000553866 LAMB2P55268 1798 aa16.27■□□□□ 0.2
CHGA-203ENST00000553866 CCDC88AQ3V6T2 1871 aa16.27■□□□□ 0.19
CHGA-203ENST00000553866 VAMP4O75379 141 aa16.26■□□□□ 0.19
CHGA-203ENST00000553866 HCLS1P14317 486 aaPredicted RBP16.26■□□□□ 0.19
CHGA-203ENST00000553866 MIER1Q8N108 512 aa16.26■□□□□ 0.19
CHGA-203ENST00000553866 RNF181Q9P0P0 153 aa16.26■□□□□ 0.19
CHGA-203ENST00000553866 SLC10A5Q5PT55 438 aa16.25■□□□□ 0.19
CHGA-203ENST00000553866 RIC3Q7Z5B4 369 aa16.25■□□□□ 0.19
CHGA-203ENST00000553866 TRMT112Q9UI30 125 aaKnown RBP16.25■□□□□ 0.19
CHGA-203ENST00000553866 HOXA10P31260 410 aaPredicted RBP16.24■□□□□ 0.19
CHGA-203ENST00000553866 GOLGA2Q08379 1002 aa16.24■□□□□ 0.19
CHGA-203ENST00000553866 DIEXFQ68CQ4 756 aaKnown RBP16.24■□□□□ 0.19
CHGA-203ENST00000553866 MYD88Q99836 296 aa16.24■□□□□ 0.19
CHGA-203ENST00000553866 DDX60Q8IY21 1712 aaKnown RBP16.24■□□□□ 0.19
CHGA-203ENST00000553866 SLC4A2P04920 1241 aa16.23■□□□□ 0.19
CHGA-203ENST00000553866 RTL5Q5HYW3 569 aaPredicted RBP16.23■□□□□ 0.19
CHGA-203ENST00000553866 FAM89AQ96GI7 184 aa16.23■□□□□ 0.19
CHGA-203ENST00000553866 TAF1P21675 1872 aa16.22■□□□□ 0.19
CHGA-203ENST00000553866 SH3TC1Q8TE82 1336 aa16.22■□□□□ 0.19
CHGA-203ENST00000553866 RPGRQ92834 1020 aaKnown RBP16.22■□□□□ 0.19
CHGA-203ENST00000553866 NLRP3Q96P20 1036 aa16.22■□□□□ 0.19
CHGA-203ENST00000553866 MAP3K2Q9Y2U5 619 aa16.22■□□□□ 0.19
CHGA-203ENST00000553866 COL4A1P02462 1669 aa16.21■□□□□ 0.19
CHGA-203ENST00000553866 SNED1Q8TER0 1413 aa16.21■□□□□ 0.19
CHGA-203ENST00000553866 PI4KAP2A4QPH2 592 aa16.21■□□□□ 0.19
CHGA-203ENST00000553866 LMNB1P20700 586 aa16.21■□□□□ 0.19
CHGA-203ENST00000553866 ALDH1B1P30837 517 aa16.21■□□□□ 0.19
CHGA-203ENST00000553866 TRIM28Q13263 835 aaKnown RBP16.21■□□□□ 0.19
CHGA-203ENST00000553866 PI4KAP1Q8N8J0 262 aa16.21■□□□□ 0.19
CHGA-203ENST00000553866 JARID2Q92833 1246 aaPredicted RBP16.21■□□□□ 0.19
CHGA-203ENST00000553866 METTL22Q9BUU2 404 aaPredicted RBP16.21■□□□□ 0.19
CHGA-203ENST00000553866 STK31Q9BXU1 1019 aa16.21■□□□□ 0.19
CHGA-203ENST00000553866 MYH16Q9H6N6 1097 aa16.21■□□□□ 0.19
CHGA-203ENST00000553866 GPBP1L1Q9HC44 474 aaPredicted RBP16.21■□□□□ 0.19
CHGA-203ENST00000553866 TIAM2Q8IVF5 1701 aa16.21■□□□□ 0.19
CHGA-203ENST00000553866 RNF123Q5XPI4 1314 aa16.2■□□□□ 0.18
CHGA-203ENST00000553866 IGKV5-2P06315 115 aa16.2■□□□□ 0.18
CHGA-203ENST00000553866 KSR2Q6VAB6 950 aa16.2■□□□□ 0.18
CHGA-203ENST00000553866 CDCA7LQ96GN5 454 aa16.2■□□□□ 0.18
CHGA-203ENST00000553866 CRAMP1Q96RY5 1269 aa16.2■□□□□ 0.18
CHGA-203ENST00000553866 ABCC4O15439 1325 aa16.19■□□□□ 0.18
CHGA-203ENST00000553866 LTBP3Q9NS15 1303 aa16.19■□□□□ 0.18
CHGA-203ENST00000553866 FLIIQ13045 1269 aa16.19■□□□□ 0.18
CHGA-203ENST00000553866 CCDC93Q567U6 631 aa16.19■□□□□ 0.18
CHGA-203ENST00000553866 RBM17Q96I25 401 aaKnown RBP16.19■□□□□ 0.18
CHGA-203ENST00000553866 CHMP4AQ9BY43 222 aa16.19■□□□□ 0.18
CHGA-203ENST00000553866 TAOK3Q9H2K8 898 aa16.19■□□□□ 0.18
CHGA-203ENST00000553866 NMRK2Q9NPI5 230 aa16.19■□□□□ 0.18
CHGA-203ENST00000553866 DICER1Q9UPY3 1922 aaKnown RBP16.19■□□□□ 0.18
CHGA-203ENST00000553866 KIF3CO14782 793 aa16.18■□□□□ 0.18
CHGA-203ENST00000553866 DDX58O95786 925 aaKnown RBP16.18■□□□□ 0.18
CHGA-203ENST00000553866 SLFN5Q08AF3 891 aa16.18■□□□□ 0.18
CHGA-203ENST00000553866 PPEF1O14829 653 aaPredicted RBP16.17■□□□□ 0.18
CHGA-203ENST00000553866 FKBP4Q02790 459 aaKnown RBP eCLIP16.17■□□□□ 0.18
CHGA-203ENST00000553866 CWF19L2Q2TBE0 894 aaKnown RBP16.17■□□□□ 0.18
CHGA-203ENST00000553866 SOGA3Q5TF21 947 aa16.17■□□□□ 0.18
CHGA-203ENST00000553866 ZBTB38Q8NAP3 1195 aaPredicted RBP16.17■□□□□ 0.18
CHGA-203ENST00000553866 ZNF277Q9NRM2 450 aaPredicted RBP16.17■□□□□ 0.18
CHGA-203ENST00000553866 CACNA1FO60840 1977 aa16.17■□□□□ 0.18
CHGA-203ENST00000553866 IRS4O14654 1257 aaPredicted RBP16.16■□□□□ 0.18
CHGA-203ENST00000553866 CCDC191Q8NCU4 936 aa16.16■□□□□ 0.18
CHGA-203ENST00000553866 CWC25Q9NXE8 425 aaPredicted RBP16.16■□□□□ 0.18
CHGA-203ENST00000553866 PCCAP05165 728 aaPredicted RBP16.15■□□□□ 0.18
CHGA-203ENST00000553866 C1QTNF8P60827 252 aa16.15■□□□□ 0.18
CHGA-203ENST00000553866 FKBP5Q13451 457 aaPredicted RBP16.15■□□□□ 0.18
CHGA-203ENST00000553866 SF3B3Q15393 1217 aaKnown RBP16.15■□□□□ 0.18
CHGA-203ENST00000553866 COL4A5P29400 1685 aa16.14■□□□□ 0.18
CHGA-203ENST00000553866 NEURL1BA8MQ27 555 aa16.14■□□□□ 0.17
CHGA-203ENST00000553866 E9PSI1 815 aa16.14■□□□□ 0.17
CHGA-203ENST00000553866 F6X3S4 739 aa16.14■□□□□ 0.17
CHGA-203ENST00000553866 TRMT2AQ8IZ69 625 aaKnown RBP16.14■□□□□ 0.17
CHGA-203ENST00000553866 RTKN2Q8IZC4 609 aa16.14■□□□□ 0.17
CHGA-203ENST00000553866 CELF1Q92879 486 aaKnown RBP16.14■□□□□ 0.17
CHGA-203ENST00000553866 GLTPD2A6NH11 291 aa16.13■□□□□ 0.17
CHGA-203ENST00000553866 GRAPQ13588 217 aa16.13■□□□□ 0.17
CHGA-203ENST00000553866 DDX46Q7L014 1031 aaKnown RBP16.13■□□□□ 0.17
CHGA-203ENST00000553866 GRAPLQ8TC17 118 aaPredicted RBP16.13■□□□□ 0.17
CHGA-203ENST00000553866 RRAGCQ9HB90 399 aa16.13■□□□□ 0.17
CHGA-203ENST00000553866 ATP6V0A2Q9Y487 856 aa16.13■□□□□ 0.17
CHGA-203ENST00000553866 DNAAF4Q8WXU2 420 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms