RNA–Protein interactions for RNA: ENST00000553857.5

UBR7-203, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 3

Gene UBR7, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-203ENST00000553857 USP17L4A6NCW7 530 aa7.84□□□□□ -1.15
UBR7-203ENST00000553857 HDGFL1Q5TGJ6 251 aa7.84□□□□□ -1.15
UBR7-203ENST00000553857 USP17L2Q6R6M4 530 aa7.84□□□□□ -1.15
UBR7-203ENST00000553857 USP17L1Q7RTZ2 530 aa7.84□□□□□ -1.15
UBR7-203ENST00000553857 SYT9Q86SS6 491 aa7.84□□□□□ -1.15
UBR7-203ENST00000553857 SLC30A3Q99726 388 aa7.84□□□□□ -1.15
UBR7-203ENST00000553857 AVENQ9NQS1 362 aaPredicted RBP7.84□□□□□ -1.15
UBR7-203ENST00000553857 ZNF232Q9UNY5 417 aa7.84□□□□□ -1.15
UBR7-203ENST00000553857 PPP1R15AO75807 674 aaPredicted RBP7.83□□□□□ -1.16
UBR7-203ENST00000553857 DKK1O94907 266 aa7.83□□□□□ -1.16
UBR7-203ENST00000553857 CCDC102BQ68D86 513 aa7.83□□□□□ -1.16
UBR7-203ENST00000553857 ALYREFQ86V81 257 aaKnown RBP7.83□□□□□ -1.16
UBR7-203ENST00000553857 HSH2DQ96JZ2 352 aa7.83□□□□□ -1.16
UBR7-203ENST00000553857 TOPBP1Q92547 1522 aa7.83□□□□□ -1.16
UBR7-203ENST00000553857 K7ELQ4 463 aaPredicted RBP7.82□□□□□ -1.16
UBR7-203ENST00000553857 XP32Q5T750 250 aa7.82□□□□□ -1.16
UBR7-203ENST00000553857 RAB44Q7Z6P3 723 aaPredicted RBP7.82□□□□□ -1.16
UBR7-203ENST00000553857 PLEKHM2Q8IWE5 1019 aa7.82□□□□□ -1.16
UBR7-203ENST00000553857 ZNF280CQ8ND82 737 aa7.82□□□□□ -1.16
UBR7-203ENST00000553857 THOC2Q8NI27 1593 aaKnown RBP7.82□□□□□ -1.16
UBR7-203ENST00000553857 HCN4Q9Y3Q4 1203 aa7.82□□□□□ -1.16
UBR7-203ENST00000553857 LAMC3Q9Y6N6 1575 aa7.82□□□□□ -1.16
UBR7-203ENST00000553857 PHLDB1Q86UU1 1377 aa7.82□□□□□ -1.16
UBR7-203ENST00000553857 CCDC18Q5T9S5 1454 aa7.81□□□□□ -1.16
UBR7-203ENST00000553857 FGD6Q6ZV73 1430 aa7.81□□□□□ -1.16
UBR7-203ENST00000553857 SERTM1A2A2V5 107 aa7.81□□□□□ -1.16
UBR7-203ENST00000553857 SFI1A8K8P3 1242 aa7.81□□□□□ -1.16
UBR7-203ENST00000553857 ITGB7P26010 798 aa7.81□□□□□ -1.16
UBR7-203ENST00000553857 DDX10Q13206 875 aaKnown RBP7.81□□□□□ -1.16
UBR7-203ENST00000553857 LAMC2Q13753 1193 aa7.81□□□□□ -1.16
UBR7-203ENST00000553857 C8orf86Q6ZUL3 223 aa7.81□□□□□ -1.16
UBR7-203ENST00000553857 OGFOD1Q8N543 542 aa7.81□□□□□ -1.16
UBR7-203ENST00000553857 TSEN2Q8NCE0 465 aaKnown RBP7.81□□□□□ -1.16
UBR7-203ENST00000553857 PLVAPQ9BX97 442 aa7.81□□□□□ -1.16
UBR7-203ENST00000553857 SUPT16HQ9Y5B9 1047 aaKnown RBP7.81□□□□□ -1.16
UBR7-203ENST00000553857 PCF11O94913 1555 aaKnown RBP7.8□□□□□ -1.16
UBR7-203ENST00000553857 CTTNBP2Q8WZ74 1663 aa7.8□□□□□ -1.16
UBR7-203ENST00000553857 UACAQ9BZF9 1416 aa7.8□□□□□ -1.16
UBR7-203ENST00000553857 C21orf2O43822 256 aa7.8□□□□□ -1.16
UBR7-203ENST00000553857 ATP9BO43861 1147 aa7.8□□□□□ -1.16
UBR7-203ENST00000553857 RAD21O60216 631 aa7.8□□□□□ -1.16
UBR7-203ENST00000553857 COL9A3Q14050 684 aaPredicted RBP7.8□□□□□ -1.16
UBR7-203ENST00000553857 POTEAQ6S8J7 498 aa7.8□□□□□ -1.16
UBR7-203ENST00000553857 RHPN1Q8TCX5 695 aa7.8□□□□□ -1.16
UBR7-203ENST00000553857 CLUAP1Q96AJ1 413 aa7.8□□□□□ -1.16
UBR7-203ENST00000553857 MKRN1Q9UHC7 482 aaKnown RBP7.8□□□□□ -1.16
UBR7-203ENST00000553857 CDK11AQ9UQ88 783 aaPredicted RBP7.8□□□□□ -1.16
UBR7-203ENST00000553857 STARD13Q9Y3M8 1113 aa7.8□□□□□ -1.16
UBR7-203ENST00000553857 POLA1P09884 1462 aaPredicted RBP7.8□□□□□ -1.16
UBR7-203ENST00000553857 FHOD3Q2V2M9 1422 aa7.79□□□□□ -1.16
UBR7-203ENST00000553857 ELOA3CA0A087WX78 387 aaPredicted RBP7.79□□□□□ -1.16
UBR7-203ENST00000553857 ELOA3DA6NLF2 546 aaPredicted RBP7.79□□□□□ -1.16
UBR7-203ENST00000553857 ELOA3BQ3SY89 546 aa7.79□□□□□ -1.16
UBR7-203ENST00000553857 TRIM50Q86XT4 487 aa7.79□□□□□ -1.16
UBR7-203ENST00000553857 ELOA3Q8NG57 546 aa7.79□□□□□ -1.16
UBR7-203ENST00000553857 ZNF594Q96JF6 807 aaPredicted RBP7.79□□□□□ -1.16
UBR7-203ENST00000553857 PHACTR1Q9C0D0 580 aa7.79□□□□□ -1.16
UBR7-203ENST00000553857 HFM1A2PYH4 1435 aa7.78□□□□□ -1.16
UBR7-203ENST00000553857 LGR5O75473 907 aa7.78□□□□□ -1.16
UBR7-203ENST00000553857 WWC1Q8IX03 1113 aa7.78□□□□□ -1.16
UBR7-203ENST00000553857 GAS2L2Q8NHY3 880 aa7.78□□□□□ -1.16
UBR7-203ENST00000553857 NOP53Q9NZM5 478 aaKnown RBP7.78□□□□□ -1.16
UBR7-203ENST00000553857 GAPVD1Q14C86 1478 aa7.78□□□□□ -1.16
UBR7-203ENST00000553857 MAPKBP1O60336 1514 aa7.78□□□□□ -1.16
UBR7-203ENST00000553857 EHBP1L1Q8N3D4 1523 aa7.78□□□□□ -1.16
UBR7-203ENST00000553857 MYOM3Q5VTT5 1437 aa7.78□□□□□ -1.16
UBR7-203ENST00000553857 KIF21AQ7Z4S6 1674 aa7.77□□□□□ -1.17
UBR7-203ENST00000553857 FAM229AH3BQW9 127 aa7.77□□□□□ -1.17
UBR7-203ENST00000553857 SIN3BO75182 1162 aa7.77□□□□□ -1.17
UBR7-203ENST00000553857 PSMA6P60900 246 aaKnown RBP7.77□□□□□ -1.17
UBR7-203ENST00000553857 DOC2BQ14184 412 aa7.77□□□□□ -1.17
UBR7-203ENST00000553857 ERICH6BQ5W0A0 696 aa7.77□□□□□ -1.17
UBR7-203ENST00000553857 SIX5Q8N196 739 aa7.77□□□□□ -1.17
UBR7-203ENST00000553857 SIN3AQ96ST3 1273 aa7.77□□□□□ -1.17
UBR7-203ENST00000553857 SUPT6HQ7KZ85 1726 aaKnown RBP7.77□□□□□ -1.17
UBR7-203ENST00000553857 RAD54L2Q9Y4B4 1467 aa7.76□□□□□ -1.17
UBR7-203ENST00000553857 ADARB2-AS1A8MUL3 147 aa7.76□□□□□ -1.17
UBR7-203ENST00000553857 PIK3R2O00459 728 aa7.76□□□□□ -1.17
UBR7-203ENST00000553857 ALBP02768 609 aa7.76□□□□□ -1.17
UBR7-203ENST00000553857 ATP1A2P50993 1020 aa7.76□□□□□ -1.17
UBR7-203ENST00000553857 HIRAP54198 1017 aaPredicted RBP7.76□□□□□ -1.17
UBR7-203ENST00000553857 TYRO3Q06418 890 aa7.76□□□□□ -1.17
UBR7-203ENST00000553857 SPEM2Q0P670 501 aa7.76□□□□□ -1.17
UBR7-203ENST00000553857 FLIIQ13045 1269 aa7.76□□□□□ -1.17
UBR7-203ENST00000553857 FNBP4Q8N3X1 1017 aaPredicted RBP7.76□□□□□ -1.17
UBR7-203ENST00000553857 LARGE2Q8N3Y3 721 aa7.76□□□□□ -1.17
UBR7-203ENST00000553857 SUSD3Q96L08 255 aa7.76□□□□□ -1.17
UBR7-203ENST00000553857 NEUROD4Q9HD90 331 aa7.76□□□□□ -1.17
UBR7-203ENST00000553857 BRD7Q9NPI1 651 aa7.76□□□□□ -1.17
UBR7-203ENST00000553857 PALM3A6NDB9 673 aaPredicted RBP7.75□□□□□ -1.17
UBR7-203ENST00000553857 M0R082 166 aa7.75□□□□□ -1.17
UBR7-203ENST00000553857 C1orf53Q5VUE5 145 aa7.75□□□□□ -1.17
UBR7-203ENST00000553857 ZNF417Q8TAU3 575 aa7.75□□□□□ -1.17
UBR7-203ENST00000553857 TNFRSF25Q93038 417 aa7.75□□□□□ -1.17
UBR7-203ENST00000553857 CEP63Q96MT8 703 aa7.75□□□□□ -1.17
UBR7-203ENST00000553857 ZNF587Q96SQ5 575 aaPredicted RBP7.75□□□□□ -1.17
UBR7-203ENST00000553857 TFIP11Q9UBB9 837 aaKnown RBP7.75□□□□□ -1.17
UBR7-203ENST00000553857 GPC6Q9Y625 555 aaPredicted RBP7.75□□□□□ -1.17
UBR7-203ENST00000553857 M0R2N6 131 aa7.74□□□□□ -1.17
UBR7-203ENST00000553857 PPP1R12BO60237 982 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms