RNA–Protein interactions for RNA: ENST00000553734.5

RAD51B-217, Transcript of RAD51 paralog B, humanhuman

TSL 3

Gene RAD51B, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-217ENST00000553734 HCN4Q9Y3Q4 1203 aa6.35□□□□□ -1.39
RAD51B-217ENST00000553734 EIF1AYO14602 144 aaKnown RBP6.34□□□□□ -1.39
RAD51B-217ENST00000553734 TRIM46Q7Z4K8 759 aa6.34□□□□□ -1.39
RAD51B-217ENST00000553734 TREML1Q86YW5 311 aa6.34□□□□□ -1.39
RAD51B-217ENST00000553734 ZSCAN10Q96SZ4 725 aaPredicted RBP6.34□□□□□ -1.39
RAD51B-217ENST00000553734 GGNBP2Q9H3C7 697 aa6.34□□□□□ -1.39
RAD51B-217ENST00000553734 ZDHHC3Q9NYG2 299 aa6.34□□□□□ -1.39
RAD51B-217ENST00000553734 ZNF232Q9UNY5 417 aa6.34□□□□□ -1.39
RAD51B-217ENST00000553734 C11orf95C9JLR9 678 aaPredicted RBP6.33□□□□□ -1.4
RAD51B-217ENST00000553734 TGFBR3LH3BV60 316 aa6.33□□□□□ -1.4
RAD51B-217ENST00000553734 CBLBQ13191 982 aa6.33□□□□□ -1.4
RAD51B-217ENST00000553734 NUDT16Q96DE0 195 aaKnown RBP6.33□□□□□ -1.4
RAD51B-217ENST00000553734 NGLY1Q96IV0 654 aa6.33□□□□□ -1.4
RAD51B-217ENST00000553734 NLRP3Q96P20 1036 aa6.33□□□□□ -1.4
RAD51B-217ENST00000553734 SPATA31C2B4DYI2 1134 aa6.32□□□□□ -1.4
RAD51B-217ENST00000553734 OPLAHO14841 1288 aa6.32□□□□□ -1.4
RAD51B-217ENST00000553734 MICAL2O94851 1124 aa6.32□□□□□ -1.4
RAD51B-217ENST00000553734 HSP90B1P14625 803 aaKnown RBP6.32□□□□□ -1.4
RAD51B-217ENST00000553734 RNF144AP50876 292 aaPredicted RBP6.32□□□□□ -1.4
RAD51B-217ENST00000553734 MRPL14Q6P1L8 145 aaKnown RBP6.32□□□□□ -1.4
RAD51B-217ENST00000553734 SPATA32Q96LK8 384 aa6.32□□□□□ -1.4
RAD51B-217ENST00000553734 CUEDC1Q9NWM3 386 aaPredicted RBP6.32□□□□□ -1.4
RAD51B-217ENST00000553734 SPG7Q9UQ90 795 aa6.32□□□□□ -1.4
RAD51B-217ENST00000553734 USP31Q70CQ4 1352 aa6.31□□□□□ -1.4
RAD51B-217ENST00000553734 CPNE3O75131 537 aaKnown RBP6.31□□□□□ -1.4
RAD51B-217ENST00000553734 TXLNAP40222 546 aa6.31□□□□□ -1.4
RAD51B-217ENST00000553734 ORC1Q13415 861 aa6.31□□□□□ -1.4
RAD51B-217ENST00000553734 WDR44Q5JSH3 913 aa6.31□□□□□ -1.4
RAD51B-217ENST00000553734 GPR152Q8TDT2 470 aa6.31□□□□□ -1.4
RAD51B-217ENST00000553734 ZFP42Q96MM3 310 aa6.31□□□□□ -1.4
RAD51B-217ENST00000553734 C11orf16Q9NQ32 467 aa6.31□□□□□ -1.4
RAD51B-217ENST00000553734 DDX41Q9UJV9 622 aaKnown RBP6.31□□□□□ -1.4
RAD51B-217ENST00000553734 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.31□□□□□ -1.4
RAD51B-217ENST00000553734 SNRPBP14678 240 aaKnown RBP6.3□□□□□ -1.4
RAD51B-217ENST00000553734 RBL2Q08999 1139 aa6.3□□□□□ -1.4
RAD51B-217ENST00000553734 C4orf17Q53FE4 359 aa6.3□□□□□ -1.4
RAD51B-217ENST00000553734 C6orf118Q5T5N4 469 aa6.3□□□□□ -1.4
RAD51B-217ENST00000553734 PDE12Q6L8Q7 609 aaKnown RBP6.3□□□□□ -1.4
RAD51B-217ENST00000553734 MEIOBQ8N635 442 aa6.3□□□□□ -1.4
RAD51B-217ENST00000553734 TRIM47Q96LD4 638 aa6.3□□□□□ -1.4
RAD51B-217ENST00000553734 CCSER2Q9H7U1 834 aa6.3□□□□□ -1.4
RAD51B-217ENST00000553734 SENP2Q9HC62 589 aa6.3□□□□□ -1.4
RAD51B-217ENST00000553734 SRA1Q9HD15 236 aaKnown RBP6.3□□□□□ -1.4
RAD51B-217ENST00000553734 PARP3Q9Y6F1 533 aa6.3□□□□□ -1.4
RAD51B-217ENST00000553734 MEN1O00255 615 aa6.29□□□□□ -1.4
RAD51B-217ENST00000553734 TNFRSF21O75509 655 aa6.29□□□□□ -1.4
RAD51B-217ENST00000553734 EIF4BP23588 611 aaKnown RBP6.29□□□□□ -1.4
RAD51B-217ENST00000553734 INPP5BP32019 993 aa6.29□□□□□ -1.4
RAD51B-217ENST00000553734 ST13P50502 369 aaKnown RBP6.29□□□□□ -1.4
RAD51B-217ENST00000553734 TMEM214Q6NUQ4 689 aaKnown RBP6.29□□□□□ -1.4
RAD51B-217ENST00000553734 TANGO6Q9C0B7 1094 aa6.29□□□□□ -1.4
RAD51B-217ENST00000553734 SRCIN1Q9C0H9 1055 aa6.29□□□□□ -1.4
RAD51B-217ENST00000553734 C12orf49Q9H741 205 aa6.29□□□□□ -1.4
RAD51B-217ENST00000553734 PRKAG2Q9UGJ0 569 aa6.29□□□□□ -1.4
RAD51B-217ENST00000553734 RACK1P63244 317 aaKnown RBP6.28□□□□□ -1.4
RAD51B-217ENST00000553734 GNL2Q13823 731 aaKnown RBP6.28□□□□□ -1.4
RAD51B-217ENST00000553734 SCARF1Q14162 830 aa6.28□□□□□ -1.4
RAD51B-217ENST00000553734 NBPF1Q3BBV0 1214 aa6.28□□□□□ -1.4
RAD51B-217ENST00000553734 GNASQ5JWF2 1037 aa6.28□□□□□ -1.4
RAD51B-217ENST00000553734 ZNF654Q8IZM8 581 aa6.28□□□□□ -1.4
RAD51B-217ENST00000553734 LINC00528Q8N1L1 170 aa6.28□□□□□ -1.4
RAD51B-217ENST00000553734 KIFC2Q96AC6 838 aa6.28□□□□□ -1.4
RAD51B-217ENST00000553734 SUSD3Q96L08 255 aa6.28□□□□□ -1.4
RAD51B-217ENST00000553734 AGBL1Q96MI9 1066 aa6.28□□□□□ -1.4
RAD51B-217ENST00000553734 OSBPL7Q9BZF2 842 aa6.28□□□□□ -1.4
RAD51B-217ENST00000553734 ACBD3Q9H3P7 528 aa6.28□□□□□ -1.4
RAD51B-217ENST00000553734 ZFYVE28Q9HCC9 887 aa6.28□□□□□ -1.4
RAD51B-217ENST00000553734 ANKIB1Q9P2G1 1089 aa6.28□□□□□ -1.4
RAD51B-217ENST00000553734 FNDC3AQ9Y2H6 1198 aaKnown RBP6.28□□□□□ -1.4
RAD51B-217ENST00000553734 SPINT1O43278 529 aa6.27□□□□□ -1.41
RAD51B-217ENST00000553734 UPP2O95045 317 aa6.27□□□□□ -1.41
RAD51B-217ENST00000553734 EGFRP00533 1210 aa6.27□□□□□ -1.41
RAD51B-217ENST00000553734 BMP2P12643 396 aa6.27□□□□□ -1.41
RAD51B-217ENST00000553734 GTF2E1P29083 439 aaPredicted RBP6.27□□□□□ -1.41
RAD51B-217ENST00000553734 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.27□□□□□ -1.41
RAD51B-217ENST00000553734 NBPF10Q6P3W6 841 aaKnown RBP6.27□□□□□ -1.41
RAD51B-217ENST00000553734 DPH6Q7L8W6 267 aa6.27□□□□□ -1.41
RAD51B-217ENST00000553734 NOP9Q86U38 636 aaKnown RBP6.27□□□□□ -1.41
RAD51B-217ENST00000553734 RHPN1Q8TCX5 695 aa6.27□□□□□ -1.41
RAD51B-217ENST00000553734 SNX29Q8TEQ0 813 aa6.27□□□□□ -1.41
RAD51B-217ENST00000553734 CCDC74AQ96AQ1 378 aa6.27□□□□□ -1.41
RAD51B-217ENST00000553734 ZNF775Q96BV0 537 aaPredicted RBP6.27□□□□□ -1.41
RAD51B-217ENST00000553734 CAPN10Q9HC96 672 aa6.27□□□□□ -1.41
RAD51B-217ENST00000553734 FAM8A1Q9UBU6 413 aa6.27□□□□□ -1.41
RAD51B-217ENST00000553734 SOBPA7XYQ1 873 aa6.26□□□□□ -1.41
RAD51B-217ENST00000553734 ATP2B1P20020 1258 aa6.26□□□□□ -1.41
RAD51B-217ENST00000553734 GJA8P48165 433 aa6.26□□□□□ -1.41
RAD51B-217ENST00000553734 IDH3AP50213 366 aa6.26□□□□□ -1.41
RAD51B-217ENST00000553734 ARSDP51689 593 aa6.26□□□□□ -1.41
RAD51B-217ENST00000553734 RELBQ01201 579 aa6.26□□□□□ -1.41
RAD51B-217ENST00000553734 TAF1CQ15572 869 aaPredicted RBP6.26□□□□□ -1.41
RAD51B-217ENST00000553734 C8orf34Q49A92 452 aa6.26□□□□□ -1.41
RAD51B-217ENST00000553734 HS2ST1Q7LGA3 356 aa6.26□□□□□ -1.41
RAD51B-217ENST00000553734 ERMP1Q7Z2K6 904 aa6.26□□□□□ -1.41
RAD51B-217ENST00000553734 TTC16Q8NEE8 873 aa6.26□□□□□ -1.41
RAD51B-217ENST00000553734 ANKRD24Q8TF21 1146 aa6.26□□□□□ -1.41
RAD51B-217ENST00000553734 TSEN34Q9BSV6 310 aaKnown RBP6.26□□□□□ -1.41
RAD51B-217ENST00000553734 ZNF395Q9H8N7 513 aaPredicted RBP6.26□□□□□ -1.41
RAD51B-217ENST00000553734 KCNMB2Q9Y691 235 aa6.26□□□□□ -1.41
RAD51B-217ENST00000553734 A6NHS1 94 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms