RNA–Protein interactions for RNA: ENST00000553733.1

CLMN-202, Transcript of calmin, humanhuman

TSL 4

Gene CLMN, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-202ENST00000553733 COL4A1P02462 1669 aa23.82■■□□□ 1.4
CLMN-202ENST00000553733 APAF1O14727 1248 aa23.81■■□□□ 1.4
CLMN-202ENST00000553733 COPS6Q7L5N1 327 aa23.81■■□□□ 1.4
CLMN-202ENST00000553733 CFAP44Q96MT7 982 aa23.81■■□□□ 1.4
CLMN-202ENST00000553733 DDX21Q9NR30 783 aaKnown RBP eCLIP23.81■■□□□ 1.4
CLMN-202ENST00000553733 MBIPQ9NS73 344 aa23.81■■□□□ 1.4
CLMN-202ENST00000553733 ZNF853P0CG23 659 aa23.8■■□□□ 1.4
CLMN-202ENST00000553733 APLP1P51693 650 aa23.8■■□□□ 1.4
CLMN-202ENST00000553733 FKBP4Q02790 459 aaKnown RBP eCLIP23.8■■□□□ 1.4
CLMN-202ENST00000553733 LTBP1Q14766 1721 aa23.79■■□□□ 1.4
CLMN-202ENST00000553733 HOXB7P09629 217 aa23.79■■□□□ 1.4
CLMN-202ENST00000553733 AIMP1Q12904 312 aaKnown RBP23.79■■□□□ 1.4
CLMN-202ENST00000553733 PARP10Q53GL7 1025 aa23.79■■□□□ 1.4
CLMN-202ENST00000553733 ZNF277Q9NRM2 450 aaPredicted RBP23.79■■□□□ 1.4
CLMN-202ENST00000553733 ALDH1B1P30837 517 aa23.78■■□□□ 1.4
CLMN-202ENST00000553733 HOXA10P31260 410 aaPredicted RBP23.78■■□□□ 1.4
CLMN-202ENST00000553733 FSTL1Q12841 308 aa23.78■■□□□ 1.4
CLMN-202ENST00000553733 HDGFL1Q5TGJ6 251 aa23.78■■□□□ 1.4
CLMN-202ENST00000553733 ZNF541Q9H0D2 1346 aa23.78■■□□□ 1.4
CLMN-202ENST00000553733 VEGFAP15692 232 aaPredicted RBP23.77■■□□□ 1.4
CLMN-202ENST00000553733 HTRA3P83110 453 aa23.77■■□□□ 1.4
CLMN-202ENST00000553733 PPP1R42Q7Z4L9 355 aa23.77■■□□□ 1.4
CLMN-202ENST00000553733 DDNO94850 711 aaPredicted RBP23.76■■□□□ 1.39
CLMN-202ENST00000553733 NLRP10Q86W26 655 aa23.76■■□□□ 1.39
CLMN-202ENST00000553733 RPGRQ92834 1020 aaKnown RBP23.76■■□□□ 1.39
CLMN-202ENST00000553733 DUOX1Q9NRD9 1551 aa23.75■■□□□ 1.39
CLMN-202ENST00000553733 DUSP27Q5VZP5 1158 aa23.75■■□□□ 1.39
CLMN-202ENST00000553733 SMC1BQ8NDV3 1235 aa23.75■■□□□ 1.39
CLMN-202ENST00000553733 UTP14AQ9BVJ6 771 aaKnown RBP23.75■■□□□ 1.39
CLMN-202ENST00000553733 IFT57Q9NWB7 429 aa23.75■■□□□ 1.39
CLMN-202ENST00000553733 DPY19L2Q6NUT2 758 aa23.74■■□□□ 1.39
CLMN-202ENST00000553733 RTKN2Q8IZC4 609 aa23.74■■□□□ 1.39
CLMN-202ENST00000553733 SYNE4Q8N205 404 aa23.74■■□□□ 1.39
CLMN-202ENST00000553733 DNAJC5GQ8N7S2 189 aa23.74■■□□□ 1.39
CLMN-202ENST00000553733 RNF123Q5XPI4 1314 aa23.74■■□□□ 1.39
CLMN-202ENST00000553733 SLC10A5Q5PT55 438 aa23.73■■□□□ 1.39
CLMN-202ENST00000553733 CRAMP1Q96RY5 1269 aa23.73■■□□□ 1.39
CLMN-202ENST00000553733 ABCC4O15439 1325 aa23.73■■□□□ 1.39
CLMN-202ENST00000553733 MYH3P11055 1940 aa23.72■■□□□ 1.39
CLMN-202ENST00000553733 IARSP41252 1262 aaKnown RBP23.72■■□□□ 1.39
CLMN-202ENST00000553733 TCIRG1Q13488 830 aa23.72■■□□□ 1.39
CLMN-202ENST00000553733 HSP90AB3PQ58FF7 597 aa23.72■■□□□ 1.39
CLMN-202ENST00000553733 ZNF428Q96B54 188 aa23.72■■□□□ 1.39
CLMN-202ENST00000553733 PSMD1Q99460 953 aa23.72■■□□□ 1.39
CLMN-202ENST00000553733 PPEF1O14829 653 aaPredicted RBP23.71■■□□□ 1.39
CLMN-202ENST00000553733 POTEIP0CG38 1075 aa23.71■■□□□ 1.39
CLMN-202ENST00000553733 POTEJP0CG39 1038 aa23.71■■□□□ 1.39
CLMN-202ENST00000553733 ZEB1P37275 1124 aaPredicted RBP23.71■■□□□ 1.39
CLMN-202ENST00000553733 RBM17Q96I25 401 aaKnown RBP23.71■■□□□ 1.39
CLMN-202ENST00000553733 L3MBTL3Q96JM7 780 aaPredicted RBP23.71■■□□□ 1.39
CLMN-202ENST00000553733 DBF4Q9UBU7 674 aaPredicted RBP23.71■■□□□ 1.39
CLMN-202ENST00000553733 PLBD2Q8NHP8 589 aa23.7■■□□□ 1.38
CLMN-202ENST00000553733 CACNA1FO60840 1977 aa23.7■■□□□ 1.38
CLMN-202ENST00000553733 SPEF2Q9C093 1822 aa23.69■■□□□ 1.38
CLMN-202ENST00000553733 HCLS1P14317 486 aaPredicted RBP23.69■■□□□ 1.38
CLMN-202ENST00000553733 NLRP3Q96P20 1036 aa23.69■■□□□ 1.38
CLMN-202ENST00000553733 SH3TC1Q8TE82 1336 aa23.68■■□□□ 1.38
CLMN-202ENST00000553733 FZD9O00144 591 aa23.68■■□□□ 1.38
CLMN-202ENST00000553733 GNAI1P63096 354 aa23.68■■□□□ 1.38
CLMN-202ENST00000553733 ISCA1Q9BUE6 129 aa23.68■■□□□ 1.38
CLMN-202ENST00000553733 TCERG1O14776 1098 aaKnown RBP23.67■■□□□ 1.38
CLMN-202ENST00000553733 CC2D2BQ6DHV5 1058 aa23.67■■□□□ 1.38
CLMN-202ENST00000553733 C8orf58Q8NAV2 365 aa23.67■■□□□ 1.38
CLMN-202ENST00000553733 TRMT112Q9UI30 125 aaKnown RBP23.67■■□□□ 1.38
CLMN-202ENST00000553733 ELL2O00472 640 aaPredicted RBP23.66■■□□□ 1.38
CLMN-202ENST00000553733 ANKRD13DQ6ZTN6 518 aa23.66■■□□□ 1.38
CLMN-202ENST00000553733 PHAXQ9H814 394 aaKnown RBP23.66■■□□□ 1.38
CLMN-202ENST00000553733 HYPKQ9NX55 129 aa23.66■■□□□ 1.38
CLMN-202ENST00000553733 ATP5J2-PTCD1G3V325 749 aa23.65■■□□□ 1.38
CLMN-202ENST00000553733 CALD1Q05682 793 aaKnown RBP23.65■■□□□ 1.38
CLMN-202ENST00000553733 ZNF316A6NFI3 1004 aaPredicted RBP23.64■■□□□ 1.37
CLMN-202ENST00000553733 TSPYL6Q8N831 410 aa23.64■■□□□ 1.37
CLMN-202ENST00000553733 ATP6V0A2Q9Y487 856 aa23.64■■□□□ 1.37
CLMN-202ENST00000553733 PCNTO95613 3336 aa23.63■■□□□ 1.37
CLMN-202ENST00000553733 TSR2Q969E8 191 aaKnown RBP23.63■■□□□ 1.37
CLMN-202ENST00000553733 KLRG1Q96E93 195 aa23.63■■□□□ 1.37
CLMN-202ENST00000553733 TAF1DQ9H5J8 278 aaPredicted RBP23.63■■□□□ 1.37
CLMN-202ENST00000553733 CCDC27Q2M243 656 aa23.62■■□□□ 1.37
CLMN-202ENST00000553733 IQCA1LA6NCM1 817 aa23.61■■□□□ 1.37
CLMN-202ENST00000553733 CHADLQ6NUI6 762 aa23.61■■□□□ 1.37
CLMN-202ENST00000553733 FAM89AQ96GI7 184 aa23.61■■□□□ 1.37
CLMN-202ENST00000553733 TRPM7Q96QT4 1865 aa23.6■■□□□ 1.37
CLMN-202ENST00000553733 GRAPQ13588 217 aa23.6■■□□□ 1.37
CLMN-202ENST00000553733 GRIPAP1Q4V328 841 aa23.6■■□□□ 1.37
CLMN-202ENST00000553733 WWC1Q8IX03 1113 aa23.6■■□□□ 1.37
CLMN-202ENST00000553733 GRAPLQ8TC17 118 aaPredicted RBP23.6■■□□□ 1.37
CLMN-202ENST00000553733 MRS2Q9HD23 443 aa23.6■■□□□ 1.37
CLMN-202ENST00000553733 PSME4Q14997 1843 aa23.6■■□□□ 1.37
CLMN-202ENST00000553733 SCN9AQ15858 1988 aa23.6■■□□□ 1.37
CLMN-202ENST00000553733 AOC3Q16853 763 aa23.59■■□□□ 1.37
CLMN-202ENST00000553733 GPC2Q8N158 579 aa23.59■■□□□ 1.37
CLMN-202ENST00000553733 LARGE2Q8N3Y3 721 aa23.59■■□□□ 1.37
CLMN-202ENST00000553733 JDP2Q8WYK2 163 aa23.59■■□□□ 1.37
CLMN-202ENST00000553733 RTFDC1Q9BY42 306 aaPredicted RBP23.59■■□□□ 1.37
CLMN-202ENST00000553733 GOLGA2Q08379 1002 aa23.58■■□□□ 1.37
CLMN-202ENST00000553733 TRIM28Q13263 835 aaKnown RBP23.58■■□□□ 1.37
CLMN-202ENST00000553733 RTL5Q5HYW3 569 aaPredicted RBP23.58■■□□□ 1.37
CLMN-202ENST00000553733 JMYQ8N9B5 988 aa23.58■■□□□ 1.37
CLMN-202ENST00000553733 HACL1Q9UJ83 578 aa23.58■■□□□ 1.37
CLMN-202ENST00000553733 PASKQ96RG2 1323 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms