RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 MICAL2O94851 1124 aa6.48□□□□□ -1.37
VRK1-202ENST00000553683 SPEM2Q0P670 501 aa6.48□□□□□ -1.37
VRK1-202ENST00000553683 SFSWAPQ12872 951 aaKnown RBP6.48□□□□□ -1.37
VRK1-202ENST00000553683 WHAMMQ8TF30 809 aa6.48□□□□□ -1.37
VRK1-202ENST00000553683 ARID3AQ99856 593 aa6.48□□□□□ -1.37
VRK1-202ENST00000553683 STRN4Q9NRL3 753 aa6.48□□□□□ -1.37
VRK1-202ENST00000553683 KLK14Q9P0G3 267 aa6.48□□□□□ -1.37
VRK1-202ENST00000553683 ADARB2-AS1A8MUL3 147 aa6.47□□□□□ -1.37
VRK1-202ENST00000553683 EGFRP00533 1210 aa6.47□□□□□ -1.37
VRK1-202ENST00000553683 IDH3AP50213 366 aa6.47□□□□□ -1.37
VRK1-202ENST00000553683 ABTB2Q8N961 1025 aa6.47□□□□□ -1.37
VRK1-202ENST00000553683 TNFRSF25Q93038 417 aa6.47□□□□□ -1.37
VRK1-202ENST00000553683 STIM2Q9P246 746 aa6.47□□□□□ -1.37
VRK1-202ENST00000553683 GGA1Q9UJY5 639 aa6.47□□□□□ -1.37
VRK1-202ENST00000553683 ADAMTS8Q9UP79 889 aa6.47□□□□□ -1.37
VRK1-202ENST00000553683 RNF225M0QZC1 329 aaPredicted RBP6.46□□□□□ -1.38
VRK1-202ENST00000553683 EPXP11678 715 aa6.46□□□□□ -1.38
VRK1-202ENST00000553683 GALNT6Q8NCL4 622 aa6.46□□□□□ -1.38
VRK1-202ENST00000553683 HELQQ8TDG4 1101 aa6.46□□□□□ -1.38
VRK1-202ENST00000553683 EDARADDQ8WWZ3 215 aa6.46□□□□□ -1.38
VRK1-202ENST00000553683 MDFIQ99750 246 aa6.46□□□□□ -1.38
VRK1-202ENST00000553683 PIK3R2O00459 728 aa6.45□□□□□ -1.38
VRK1-202ENST00000553683 TNFRSF10BO14763 440 aa6.45□□□□□ -1.38
VRK1-202ENST00000553683 OPLAHO14841 1288 aa6.45□□□□□ -1.38
VRK1-202ENST00000553683 MAP3K6O95382 1288 aa6.45□□□□□ -1.38
VRK1-202ENST00000553683 CCINQ13939 588 aa6.45□□□□□ -1.38
VRK1-202ENST00000553683 PCSK7Q16549 785 aa6.45□□□□□ -1.38
VRK1-202ENST00000553683 PHLDB3Q6NSJ2 640 aa6.45□□□□□ -1.38
VRK1-202ENST00000553683 SYT9Q86SS6 491 aa6.45□□□□□ -1.38
VRK1-202ENST00000553683 TREML1Q86YW5 311 aa6.45□□□□□ -1.38
VRK1-202ENST00000553683 SCARF2Q96GP6 870 aaPredicted RBP6.45□□□□□ -1.38
VRK1-202ENST00000553683 GSX2Q9BZM3 304 aa6.45□□□□□ -1.38
VRK1-202ENST00000553683 SAP130Q9H0E3 1048 aa6.45□□□□□ -1.38
VRK1-202ENST00000553683 KLF15Q9UIH9 416 aa6.45□□□□□ -1.38
VRK1-202ENST00000553683 DNMT3AQ9Y6K1 912 aaPredicted RBP6.45□□□□□ -1.38
VRK1-202ENST00000553683 ELOA3CA0A087WX78 387 aaPredicted RBP6.44□□□□□ -1.38
VRK1-202ENST00000553683 ELOA3DA6NLF2 546 aaPredicted RBP6.44□□□□□ -1.38
VRK1-202ENST00000553683 NEURL1BA8MQ27 555 aa6.44□□□□□ -1.38
VRK1-202ENST00000553683 RPLP1P05386 114 aaKnown RBP6.44□□□□□ -1.38
VRK1-202ENST00000553683 NPR3P17342 541 aa6.44□□□□□ -1.38
VRK1-202ENST00000553683 SF3B2Q13435 895 aaKnown RBP6.44□□□□□ -1.38
VRK1-202ENST00000553683 ELOA3BQ3SY89 546 aa6.44□□□□□ -1.38
VRK1-202ENST00000553683 KANK3Q6NY19 840 aa6.44□□□□□ -1.38
VRK1-202ENST00000553683 ELOA3Q8NG57 546 aa6.44□□□□□ -1.38
VRK1-202ENST00000553683 SLC30A3Q99726 388 aa6.44□□□□□ -1.38
VRK1-202ENST00000553683 MKNK1Q9BUB5 465 aa6.44□□□□□ -1.38
VRK1-202ENST00000553683 EGFL7Q9UHF1 273 aa6.44□□□□□ -1.38
VRK1-202ENST00000553683 ALAS2P22557 587 aa6.43□□□□□ -1.38
VRK1-202ENST00000553683 ARID4AP29374 1257 aaPredicted RBP6.43□□□□□ -1.38
VRK1-202ENST00000553683 MARSP56192 900 aaKnown RBP6.43□□□□□ -1.38
VRK1-202ENST00000553683 NAA30Q147X3 362 aaPredicted RBP6.43□□□□□ -1.38
VRK1-202ENST00000553683 ALKBH2Q6NS38 261 aa6.43□□□□□ -1.38
VRK1-202ENST00000553683 CAPN12Q6ZSI9 719 aa6.43□□□□□ -1.38
VRK1-202ENST00000553683 FCHSD1Q86WN1 690 aa6.43□□□□□ -1.38
VRK1-202ENST00000553683 ETFBKMTQ8IXQ9 262 aa6.43□□□□□ -1.38
VRK1-202ENST00000553683 BEND7Q8N7W2 519 aaPredicted RBP6.43□□□□□ -1.38
VRK1-202ENST00000553683 RETREG2Q8NC44 543 aa6.43□□□□□ -1.38
VRK1-202ENST00000553683 NEDD1Q8NHV4 660 aa6.43□□□□□ -1.38
VRK1-202ENST00000553683 PIK3R5Q8WYR1 880 aa6.43□□□□□ -1.38
VRK1-202ENST00000553683 RTCBQ9Y3I0 505 aaKnown RBP6.43□□□□□ -1.38
VRK1-202ENST00000553683 PHF20L1A8MW92 1017 aa6.42□□□□□ -1.38
VRK1-202ENST00000553683 PCBP4P57723 403 aaKnown RBP6.42□□□□□ -1.38
VRK1-202ENST00000553683 KCNMA1Q12791 1236 aa6.42□□□□□ -1.38
VRK1-202ENST00000553683 C1orf229Q6ZS94 237 aaPredicted RBP6.42□□□□□ -1.38
VRK1-202ENST00000553683 PODNQ7Z5L7 613 aa6.42□□□□□ -1.38
VRK1-202ENST00000553683 BTBD6Q96KE9 485 aa6.42□□□□□ -1.38
VRK1-202ENST00000553683 SEPT3Q9UH03 358 aa6.42□□□□□ -1.38
VRK1-202ENST00000553683 FNDC3AQ9Y2H6 1198 aaKnown RBP6.42□□□□□ -1.38
VRK1-202ENST00000553683 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.42□□□□□ -1.38
VRK1-202ENST00000553683 SHISA8B8ZZ34 492 aa6.41□□□□□ -1.38
VRK1-202ENST00000553683 FAM13AO94988 1023 aa6.41□□□□□ -1.38
VRK1-202ENST00000553683 GRNP28799 593 aaKnown RBP6.41□□□□□ -1.38
VRK1-202ENST00000553683 ALYREFQ86V81 257 aaKnown RBP6.41□□□□□ -1.38
VRK1-202ENST00000553683 GTF3C2Q8WUA4 911 aaPredicted RBP6.41□□□□□ -1.38
VRK1-202ENST00000553683 PNMA5Q96PV4 448 aa6.41□□□□□ -1.38
VRK1-202ENST00000553683 PRDM6Q9NQX0 595 aa6.41□□□□□ -1.38
VRK1-202ENST00000553683 BRD1O95696 1058 aa6.4□□□□□ -1.38
VRK1-202ENST00000553683 HOXD8P13378 290 aaPredicted RBP6.4□□□□□ -1.38
VRK1-202ENST00000553683 ZAP70P43403 619 aa6.4□□□□□ -1.38
VRK1-202ENST00000553683 FKBP4Q02790 459 aaKnown RBP eCLIP6.4□□□□□ -1.38
VRK1-202ENST00000553683 NOM1Q5C9Z4 860 aaKnown RBP6.4□□□□□ -1.38
VRK1-202ENST00000553683 CHSY3Q70JA7 882 aa6.4□□□□□ -1.38
VRK1-202ENST00000553683 BHMTQ93088 406 aa6.4□□□□□ -1.38
VRK1-202ENST00000553683 MKL2Q9ULH7 1088 aa6.4□□□□□ -1.38
VRK1-202ENST00000553683 KCNMB2Q9Y691 235 aa6.4□□□□□ -1.38
VRK1-202ENST00000553683 XYLBO75191 536 aa6.39□□□□□ -1.39
VRK1-202ENST00000553683 HOXB4P17483 251 aaPredicted RBP6.39□□□□□ -1.39
VRK1-202ENST00000553683 SOX18P35713 384 aa6.39□□□□□ -1.39
VRK1-202ENST00000553683 GRIN2CQ14957 1233 aa6.39□□□□□ -1.39
VRK1-202ENST00000553683 RGL4Q8IZJ4 473 aa6.39□□□□□ -1.39
VRK1-202ENST00000553683 PCSK2P16519 638 aa6.38□□□□□ -1.39
VRK1-202ENST00000553683 AMPD1P23109 780 aa6.38□□□□□ -1.39
VRK1-202ENST00000553683 ADH7P40394 386 aa6.38□□□□□ -1.39
VRK1-202ENST00000553683 USP5P45974 858 aa6.38□□□□□ -1.39
VRK1-202ENST00000553683 DGKGP49619 791 aa6.38□□□□□ -1.39
VRK1-202ENST00000553683 FAM26DQ5JW98 314 aa6.38□□□□□ -1.39
VRK1-202ENST00000553683 PDE12Q6L8Q7 609 aaKnown RBP6.38□□□□□ -1.39
VRK1-202ENST00000553683 XKR5Q6UX68 686 aa6.38□□□□□ -1.39
VRK1-202ENST00000553683 TXNDC2Q86VQ3 553 aa6.38□□□□□ -1.39
VRK1-202ENST00000553683 NLRP13Q86W25 1043 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms