RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 IFT172Q9UG01 1749 aa8.31□□□□□ -1.08
SMARCE1P3-201ENST00000553649 ADGRF5Q8IZF2 1346 aa8.3□□□□□ -1.08
SMARCE1P3-201ENST00000553649 ACIN1Q9UKV3 1341 aaKnown RBP8.3□□□□□ -1.08
SMARCE1P3-201ENST00000553649 COL24A1Q17RW2 1714 aa8.3□□□□□ -1.08
SMARCE1P3-201ENST00000553649 ZC3H6P61129 1189 aaKnown RBP8.3□□□□□ -1.08
SMARCE1P3-201ENST00000553649 TMEM132EQ6IEE7 984 aa8.3□□□□□ -1.08
SMARCE1P3-201ENST00000553649 PCDHGC3Q9UN70 934 aa8.3□□□□□ -1.08
SMARCE1P3-201ENST00000553649 TLL2Q9Y6L7 1015 aa8.3□□□□□ -1.08
SMARCE1P3-201ENST00000553649 LRRC37A3O60309 1634 aa8.29□□□□□ -1.08
SMARCE1P3-201ENST00000553649 IRF6O14896 467 aa8.29□□□□□ -1.08
SMARCE1P3-201ENST00000553649 MAP2K5Q13163 448 aa8.29□□□□□ -1.08
SMARCE1P3-201ENST00000553649 RETREG3Q86VR2 466 aa8.29□□□□□ -1.08
SMARCE1P3-201ENST00000553649 LMO7Q8WWI1 1683 aa8.29□□□□□ -1.08
SMARCE1P3-201ENST00000553649 SBF2Q86WG5 1849 aa8.29□□□□□ -1.08
SMARCE1P3-201ENST00000553649 TULP4Q9NRJ4 1543 aa8.29□□□□□ -1.08
SMARCE1P3-201ENST00000553649 CPDO75976 1380 aa8.28□□□□□ -1.08
SMARCE1P3-201ENST00000553649 GPRASP1Q5JY77 1395 aa8.28□□□□□ -1.08
SMARCE1P3-201ENST00000553649 ANKRD30BQ9BXX2 1392 aa8.28□□□□□ -1.08
SMARCE1P3-201ENST00000553649 DDB1Q16531 1140 aa8.28□□□□□ -1.08
SMARCE1P3-201ENST00000553649 NMRK2Q9NPI5 230 aa8.28□□□□□ -1.08
SMARCE1P3-201ENST00000553649 SPATA31E1Q6ZUB1 1445 aa8.28□□□□□ -1.08
SMARCE1P3-201ENST00000553649 PNPLA7Q6ZV29 1317 aa8.28□□□□□ -1.08
SMARCE1P3-201ENST00000553649 RGPD8O14715 1765 aaPredicted RBP8.27□□□□□ -1.08
SMARCE1P3-201ENST00000553649 VSIG8P0DPA2 414 aa8.27□□□□□ -1.09
SMARCE1P3-201ENST00000553649 SAFB2Q14151 953 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMARCE1P3-201ENST00000553649 LINC01559Q495D7 138 aa8.27□□□□□ -1.09
SMARCE1P3-201ENST00000553649 MRPL14Q6P1L8 145 aaKnown RBP8.27□□□□□ -1.09
SMARCE1P3-201ENST00000553649 BAP1Q92560 729 aa8.27□□□□□ -1.09
SMARCE1P3-201ENST00000553649 KLF16Q9BXK1 252 aaPredicted RBP8.27□□□□□ -1.09
SMARCE1P3-201ENST00000553649 LRRC4BQ9NT99 713 aa8.27□□□□□ -1.09
SMARCE1P3-201ENST00000553649 TOPAZ1Q8N9V7 1692 aa8.27□□□□□ -1.09
SMARCE1P3-201ENST00000553649 FSTL1Q12841 308 aa8.26□□□□□ -1.09
SMARCE1P3-201ENST00000553649 NNTQ13423 1086 aa8.26□□□□□ -1.09
SMARCE1P3-201ENST00000553649 PURBQ96QR8 312 aaKnown RBP8.26□□□□□ -1.09
SMARCE1P3-201ENST00000553649 PRR36Q9H6K5 1346 aa8.26□□□□□ -1.09
SMARCE1P3-201ENST00000553649 ARHGEF28Q8N1W1 1705 aaKnown RBP8.26□□□□□ -1.09
SMARCE1P3-201ENST00000553649 COL5A2P05997 1499 aaPredicted RBP8.26□□□□□ -1.09
SMARCE1P3-201ENST00000553649 CCNYL3P0C7X3 344 aa8.25□□□□□ -1.09
SMARCE1P3-201ENST00000553649 TIMP2P16035 220 aa8.25□□□□□ -1.09
SMARCE1P3-201ENST00000553649 UNC93B1Q9H1C4 597 aa8.25□□□□□ -1.09
SMARCE1P3-201ENST00000553649 FAM217BQ9NTX9 383 aaPredicted RBP8.25□□□□□ -1.09
SMARCE1P3-201ENST00000553649 CRB1P82279 1406 aa8.25□□□□□ -1.09
SMARCE1P3-201ENST00000553649 EIF3AQ14152 1382 aaKnown RBP8.24□□□□□ -1.09
SMARCE1P3-201ENST00000553649 MLLT1Q03111 559 aaPredicted RBP8.24□□□□□ -1.09
SMARCE1P3-201ENST00000553649 EVA1BQ9NVM1 165 aa8.24□□□□□ -1.09
SMARCE1P3-201ENST00000553649 USP19O94966 1318 aa8.24□□□□□ -1.09
SMARCE1P3-201ENST00000553649 FDX1P10109 184 aa8.23□□□□□ -1.09
SMARCE1P3-201ENST00000553649 MS4A1P11836 297 aa8.23□□□□□ -1.09
SMARCE1P3-201ENST00000553649 RGS19P49795 217 aa8.23□□□□□ -1.09
SMARCE1P3-201ENST00000553649 NUTM2GQ5VZR2 741 aa8.23□□□□□ -1.09
SMARCE1P3-201ENST00000553649 KCTD17Q8N5Z5 321 aa8.23□□□□□ -1.09
SMARCE1P3-201ENST00000553649 C14orf93Q9H972 538 aaKnown RBP8.23□□□□□ -1.09
SMARCE1P3-201ENST00000553649 CD2APQ9Y5K6 639 aa8.23□□□□□ -1.09
SMARCE1P3-201ENST00000553649 WDR4P57081 412 aaKnown RBP8.22□□□□□ -1.09
SMARCE1P3-201ENST00000553649 KCNMA1Q12791 1236 aa8.22□□□□□ -1.09
SMARCE1P3-201ENST00000553649 MPNDQ8N594 471 aa8.22□□□□□ -1.09
SMARCE1P3-201ENST00000553649 ZNF511Q8NB15 262 aa8.22□□□□□ -1.09
SMARCE1P3-201ENST00000553649 ABHD8Q96I13 439 aa8.22□□□□□ -1.09
SMARCE1P3-201ENST00000553649 PRAM1Q96QH2 718 aa8.22□□□□□ -1.09
SMARCE1P3-201ENST00000553649 PRDM10Q9NQV6 1147 aa8.22□□□□□ -1.09
SMARCE1P3-201ENST00000553649 POGKQ9P215 609 aa8.22□□□□□ -1.09
SMARCE1P3-201ENST00000553649 BRD4O60885 1362 aaPredicted RBP8.22□□□□□ -1.09
SMARCE1P3-201ENST00000553649 CICQ96RK0 1608 aaPredicted RBP8.21□□□□□ -1.09
SMARCE1P3-201ENST00000553649 C6orf229H3BNL8 230 aa8.21□□□□□ -1.1
SMARCE1P3-201ENST00000553649 PTPRNQ16849 979 aa8.21□□□□□ -1.1
SMARCE1P3-201ENST00000553649 CFAP70Q5T0N1 1121 aa8.21□□□□□ -1.1
SMARCE1P3-201ENST00000553649 CCDC102AQ96A19 550 aa8.21□□□□□ -1.1
SMARCE1P3-201ENST00000553649 MPHOSPH9Q99550 1183 aa8.21□□□□□ -1.1
SMARCE1P3-201ENST00000553649 HIRIP3Q9BW71 556 aaPredicted RBP8.21□□□□□ -1.1
SMARCE1P3-201ENST00000553649 KIAA1210Q9ULL0 1709 aa8.2□□□□□ -1.1
SMARCE1P3-201ENST00000553649 ADGRB1O14514 1584 aa8.2□□□□□ -1.1
SMARCE1P3-201ENST00000553649 FOXN1O15353 648 aa8.2□□□□□ -1.1
SMARCE1P3-201ENST00000553649 VARSP26640 1264 aaKnown RBP8.2□□□□□ -1.1
SMARCE1P3-201ENST00000553649 KCNH2Q12809 1159 aa8.2□□□□□ -1.1
SMARCE1P3-201ENST00000553649 GPCPD1Q9NPB8 672 aa8.2□□□□□ -1.1
SMARCE1P3-201ENST00000553649 MINK1Q8N4C8 1332 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1P3-201ENST00000553649 POLR3AO14802 1390 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1P3-201ENST00000553649 NHSQ6T4R5 1651 aa8.19□□□□□ -1.1
SMARCE1P3-201ENST00000553649 ADH1CP00326 375 aa8.19□□□□□ -1.1
SMARCE1P3-201ENST00000553649 SCARF1Q14162 830 aa8.19□□□□□ -1.1
SMARCE1P3-201ENST00000553649 MSL1Q68DK7 614 aa8.19□□□□□ -1.1
SMARCE1P3-201ENST00000553649 NUTM1Q86Y26 1132 aa8.19□□□□□ -1.1
SMARCE1P3-201ENST00000553649 NGDNQ8NEJ9 315 aaKnown RBP8.19□□□□□ -1.1
SMARCE1P3-201ENST00000553649 ACSBG1Q96GR2 724 aa8.19□□□□□ -1.1
SMARCE1P3-201ENST00000553649 TFCP2L1Q9NZI6 479 aa8.19□□□□□ -1.1
SMARCE1P3-201ENST00000553649 QSER1Q2KHR3 1735 aa8.19□□□□□ -1.1
SMARCE1P3-201ENST00000553649 IGSF1Q8N6C5 1336 aa8.19□□□□□ -1.1
SMARCE1P3-201ENST00000553649 C10orf71Q711Q0 1435 aa8.19□□□□□ -1.1
SMARCE1P3-201ENST00000553649 PLEKHG3A1L390 1219 aa8.18□□□□□ -1.1
SMARCE1P3-201ENST00000553649 WASLO00401 505 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1P3-201ENST00000553649 PPFIA3O75145 1194 aa8.18□□□□□ -1.1
SMARCE1P3-201ENST00000553649 NDUFV2P19404 249 aa8.18□□□□□ -1.1
SMARCE1P3-201ENST00000553649 COL23A1Q86Y22 540 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1P3-201ENST00000553649 C16orf71Q8IYS4 520 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1P3-201ENST00000553649 CDCA7Q9BWT1 371 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1P3-201ENST00000553649 ZFAND3Q9H8U3 227 aa8.18□□□□□ -1.1
SMARCE1P3-201ENST00000553649 TRAK1Q9UPV9 953 aa8.18□□□□□ -1.1
SMARCE1P3-201ENST00000553649 USP6P35125 1406 aa8.18□□□□□ -1.1
SMARCE1P3-201ENST00000553649 CLCN1P35523 988 aa8.17□□□□□ -1.1
SMARCE1P3-201ENST00000553649 KRT76Q01546 638 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms