RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 SH2B1Q9NRF2 756 aaPredicted RBP6.33□□□□□ -1.4
TMEM55B-204ENST00000553602 SNRKQ9NRH2 765 aa6.33□□□□□ -1.4
TMEM55B-204ENST00000553602 PALD1Q9ULE6 856 aa6.33□□□□□ -1.4
TMEM55B-204ENST00000553602 EXOC6BQ9Y2D4 811 aa6.33□□□□□ -1.4
TMEM55B-204ENST00000553602 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.33□□□□□ -1.4
TMEM55B-204ENST00000553602 RFX7Q2KHR2 1363 aa6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 JCADQ9P266 1359 aa6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 SLIT3O75094 1523 aa6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 PNMA6EA0A0J9YXQ4 647 aa6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 SYCE3A1L190 88 aa6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 F6X3S4 739 aa6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 GLRX3O76003 335 aaKnown RBP6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 TPM3P06753 285 aa6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 HOXC9P31274 260 aa6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 GTF2F1P35269 517 aaKnown RBP eCLIP6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 UBE2HP62256 183 aa6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 KIAA2012Q0VF49 1180 aa6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 TAF7Q15545 349 aaPredicted RBP6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 SLC4A10Q6U841 1118 aa6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 CNTROBQ8N137 903 aa6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 RUFY2Q8WXA3 655 aa6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 PRIMPOLQ96LW4 560 aa6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 ZSCAN31Q96LW9 406 aaPredicted RBP6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 LSG1Q9H089 658 aaKnown RBP6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 LRRFIP2Q9Y608 721 aaKnown RBP6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 MST1RQ04912 1400 aa6.32□□□□□ -1.4
TMEM55B-204ENST00000553602 HEG1Q9ULI3 1381 aa6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 SIPA1L3O60292 1781 aaPredicted RBP6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 LTN1O94822 1766 aa6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 ELP1O95163 1332 aa6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 GRXCR2A6NFK2 248 aa6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 HIP1O00291 1037 aa6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 ALDH1L1O75891 902 aa6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 ZSCAN22P10073 491 aaPredicted RBP6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 AMPHP49418 695 aa6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 HMGN5P82970 282 aaKnown RBP6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 VPS53Q5VIR6 699 aa6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 TICAM2Q86XR7 235 aa6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 ERC1Q8IUD2 1116 aa6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 RHPN1Q8TCX5 695 aa6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 PIBF1Q8WXW3 757 aa6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 ALDH8A1Q9H2A2 487 aaPredicted RBP6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 SPTLC3Q9NUV7 552 aa6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 RBM27Q9P2N5 1060 aaKnown RBP6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 USP25Q9UHP3 1055 aa6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 LIMCH1Q9UPQ0 1083 aa6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 EID1Q9Y6B2 187 aa6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 COL15A1P39059 1388 aa6.31□□□□□ -1.4
TMEM55B-204ENST00000553602 UTYO14607 1347 aa6.3□□□□□ -1.4
TMEM55B-204ENST00000553602 ZNF142P52746 1687 aaPredicted RBP6.3□□□□□ -1.4
TMEM55B-204ENST00000553602 TRIM6-TRIM34B2RNG4 842 aa6.3□□□□□ -1.4
TMEM55B-204ENST00000553602 FOXO3O43524 673 aa6.3□□□□□ -1.4
TMEM55B-204ENST00000553602 F13A1P00488 732 aa6.3□□□□□ -1.4
TMEM55B-204ENST00000553602 LTKP29376 864 aa6.3□□□□□ -1.4
TMEM55B-204ENST00000553602 HDGFL1Q5TGJ6 251 aa6.3□□□□□ -1.4
TMEM55B-204ENST00000553602 IL17REQ8NFR9 667 aa6.3□□□□□ -1.4
TMEM55B-204ENST00000553602 UPF1Q92900 1129 aaKnown RBP eCLIP6.3□□□□□ -1.4
TMEM55B-204ENST00000553602 GPATCH3Q96I76 525 aa6.3□□□□□ -1.4
TMEM55B-204ENST00000553602 FUCA2Q9BTY2 467 aa6.3□□□□□ -1.4
TMEM55B-204ENST00000553602 NSFL1CQ9UNZ2 370 aaKnown RBP6.3□□□□□ -1.4
TMEM55B-204ENST00000553602 SNX14Q9Y5W7 946 aa6.3□□□□□ -1.4
TMEM55B-204ENST00000553602 RGPD8O14715 1765 aaPredicted RBP6.3□□□□□ -1.4
TMEM55B-204ENST00000553602 FER1L4A9Z1Z3 1794 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 UQCRHLA0A096LP55 91 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 NUTM2FA1L443 756 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 APBB1O00213 710 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 TRIM66O15016 1216 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 GPR37O15354 613 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 STX6O43752 255 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 TBC1D12O60347 775 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 UQCRHP07919 91 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 PDCP20941 246 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 EIF4A1P60842 406 aaKnown RBP6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 BEND3Q5T5X7 828 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 PPP1R42Q7Z4L9 355 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 USP48Q86UV5 1035 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 UNC5CLQ8IV45 518 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 MYRIPQ8NFW9 859 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 OXER1Q8TDS5 423 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 DNAAF4Q8WXU2 420 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 RILPL2Q969X0 211 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 UPF3BQ9BZI7 483 aaKnown RBP6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 ZSWIM6Q9HCJ5 1215 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 AMOTL2Q9Y2J4 779 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 ADCY9O60503 1353 aa6.29□□□□□ -1.4
TMEM55B-204ENST00000553602 SURF6O75683 361 aaKnown RBP6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 CAVIN2O95810 425 aa6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 SYT1P21579 422 aa6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 PTGER2P43116 358 aa6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 AK2P54819 239 aa6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 PDE4DQ08499 809 aa6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 ANKRD1Q15327 319 aa6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 TSGA10IPQ3SY00 556 aa6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 AMOTQ4VCS5 1084 aa6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 RUFY3Q7L099 469 aa6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 NGDNQ8NEJ9 315 aaKnown RBP6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 SLC39A7Q92504 469 aa6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 IP6K1Q92551 441 aa6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 EVI5LQ96CN4 794 aa6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 IL25Q9H293 177 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms