RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 EPS15P42566 896 aa15.67■□□□□ 0.1
SRP54-203ENST00000553544 U2AF1Q01081 240 aaKnown RBP eCLIP15.67■□□□□ 0.1
SRP54-203ENST00000553544 MLLT1Q03111 559 aaPredicted RBP15.67■□□□□ 0.1
SRP54-203ENST00000553544 CRY2Q49AN0 593 aa15.67■□□□□ 0.1
SRP54-203ENST00000553544 USP50Q70EL3 339 aaPredicted RBP15.67■□□□□ 0.1
SRP54-203ENST00000553544 MCM10Q7L590 875 aa15.67■□□□□ 0.1
SRP54-203ENST00000553544 LARGE2Q8N3Y3 721 aa15.67■□□□□ 0.1
SRP54-203ENST00000553544 RPGRQ92834 1020 aaKnown RBP15.67■□□□□ 0.1
SRP54-203ENST00000553544 HOXA10P31260 410 aaPredicted RBP15.66■□□□□ 0.1
SRP54-203ENST00000553544 MAP2K2P36507 400 aa15.66■□□□□ 0.1
SRP54-203ENST00000553544 ZEB1P37275 1124 aaPredicted RBP15.66■□□□□ 0.1
SRP54-203ENST00000553544 GRM1Q13255 1194 aa15.66■□□□□ 0.1
SRP54-203ENST00000553544 CST9Q5W186 159 aa15.66■□□□□ 0.1
SRP54-203ENST00000553544 ERVV-1B6SEH8 477 aa15.65■□□□□ 0.1
SRP54-203ENST00000553544 HTATSF1O43719 755 aaKnown RBP15.65■□□□□ 0.1
SRP54-203ENST00000553544 RGS19P49795 217 aa15.65■□□□□ 0.1
SRP54-203ENST00000553544 TAF7Q15545 349 aaPredicted RBP15.65■□□□□ 0.1
SRP54-203ENST00000553544 CYP4F22Q6NT55 531 aa15.65■□□□□ 0.1
SRP54-203ENST00000553544 NGEFQ8N5V2 710 aa15.65■□□□□ 0.1
SRP54-203ENST00000553544 TMX4Q9H1E5 349 aaPredicted RBP15.65■□□□□ 0.1
SRP54-203ENST00000553544 SCNN1DP51172 638 aa15.64■□□□□ 0.09
SRP54-203ENST00000553544 FMR1Q06787 632 aaKnown RBP eCLIP15.64■□□□□ 0.092e-7■□□□□ 8.6
SRP54-203ENST00000553544 DDX10Q13206 875 aaKnown RBP15.64■□□□□ 0.09
SRP54-203ENST00000553544 NUTM1Q86Y26 1132 aa15.64■□□□□ 0.09
SRP54-203ENST00000553544 RBM17Q96I25 401 aaKnown RBP15.64■□□□□ 0.09
SRP54-203ENST00000553544 TLL2Q9Y6L7 1015 aa15.64■□□□□ 0.09
SRP54-203ENST00000553544 ARFGEF2Q9Y6D5 1785 aa15.64■□□□□ 0.09
SRP54-203ENST00000553544 DCTN1Q14203 1278 aa15.63■□□□□ 0.09
SRP54-203ENST00000553544 RALBP1Q15311 655 aa15.63■□□□□ 0.09
SRP54-203ENST00000553544 NIM1KQ8IY84 436 aa15.63■□□□□ 0.09
SRP54-203ENST00000553544 CRAMP1Q96RY5 1269 aa15.63■□□□□ 0.09
SRP54-203ENST00000553544 CACNA1SQ13698 1873 aa15.63■□□□□ 0.09
SRP54-203ENST00000553544 TRAF5O00463 557 aa15.62■□□□□ 0.09
SRP54-203ENST00000553544 TCERG1O14776 1098 aaKnown RBP15.62■□□□□ 0.09
SRP54-203ENST00000553544 CA12O43570 354 aa15.62■□□□□ 0.09
SRP54-203ENST00000553544 VPS33BQ9H267 617 aa15.62■□□□□ 0.09
SRP54-203ENST00000553544 MIS18AQ9NYP9 233 aa15.62■□□□□ 0.09
SRP54-203ENST00000553544 ADAMTSL1Q8N6G6 1762 aa15.62■□□□□ 0.09
SRP54-203ENST00000553544 KIF6Q6ZMV9 814 aa15.61■□□□□ 0.09
SRP54-203ENST00000553544 ADARB2Q9NS39 739 aaKnown RBP15.61■□□□□ 0.09
SRP54-203ENST00000553544 RRP7AQ9Y3A4 280 aaKnown RBP15.61■□□□□ 0.09
SRP54-203ENST00000553544 MAP3K15Q6ZN16 1313 aa15.61■□□□□ 0.09
SRP54-203ENST00000553544 PPEF1O14829 653 aaPredicted RBP15.6■□□□□ 0.09
SRP54-203ENST00000553544 PPIP5K2O43314 1243 aa15.6■□□□□ 0.09
SRP54-203ENST00000553544 AOC2O75106 756 aa15.6■□□□□ 0.09
SRP54-203ENST00000553544 PLEKHF1Q96S99 279 aa15.6■□□□□ 0.09
SRP54-203ENST00000553544 GPRC5DQ9NZD1 345 aa15.6■□□□□ 0.09
SRP54-203ENST00000553544 SNED1Q8TER0 1413 aa15.6■□□□□ 0.09
SRP54-203ENST00000553544 BCORQ6W2J9 1755 aa15.59■□□□□ 0.09
SRP54-203ENST00000553544 CELF2O95319 508 aaKnown RBP15.59■□□□□ 0.09
SRP54-203ENST00000553544 GPTP24298 496 aa15.59■□□□□ 0.09
SRP54-203ENST00000553544 SUSD4Q5VX71 490 aa15.59■□□□□ 0.09
SRP54-203ENST00000553544 SAPCD2Q86UD0 394 aa15.59■□□□□ 0.09
SRP54-203ENST00000553544 PNISRQ8TF01 805 aaKnown RBP15.59■□□□□ 0.09
SRP54-203ENST00000553544 HHIPL1Q96JK4 782 aa15.59■□□□□ 0.09
SRP54-203ENST00000553544 NLRP3Q96P20 1036 aa15.59■□□□□ 0.09
SRP54-203ENST00000553544 TSKSQ9UJT2 592 aa15.59■□□□□ 0.09
SRP54-203ENST00000553544 ZNRF3Q9ULT6 936 aa15.59■□□□□ 0.09
SRP54-203ENST00000553544 CXCL9Q07325 125 aa15.58■□□□□ 0.08
SRP54-203ENST00000553544 TTLL7Q6ZT98 887 aa15.58■□□□□ 0.08
SRP54-203ENST00000553544 PPP1R42Q7Z4L9 355 aa15.58■□□□□ 0.08
SRP54-203ENST00000553544 SUPT20HQ8NEM7 779 aa15.58■□□□□ 0.08
SRP54-203ENST00000553544 CFAP44Q96MT7 982 aa15.58■□□□□ 0.08
SRP54-203ENST00000553544 PCDH10Q9P2E7 1040 aa15.58■□□□□ 0.08
SRP54-203ENST00000553544 ABCC12Q96J65 1359 aa15.58■□□□□ 0.08
SRP54-203ENST00000553544 MYL6BP14649 208 aa15.57■□□□□ 0.08
SRP54-203ENST00000553544 AOC3Q16853 763 aa15.57■□□□□ 0.08
SRP54-203ENST00000553544 ZNF34Q8IZ26 560 aa15.57■□□□□ 0.08
SRP54-203ENST00000553544 ZC3H15Q8WU90 426 aaKnown RBP15.57■□□□□ 0.08
SRP54-203ENST00000553544 ZBTB3Q9H5J0 574 aa15.57■□□□□ 0.08
SRP54-203ENST00000553544 PGAP2Q9UHJ9 254 aa15.57■□□□□ 0.08
SRP54-203ENST00000553544 ATP6V0A2Q9Y487 856 aa15.57■□□□□ 0.08
SRP54-203ENST00000553544 BBOX1O75936 387 aa15.56■□□□□ 0.08
SRP54-203ENST00000553544 NEFMP07197 916 aa15.56■□□□□ 0.08
SRP54-203ENST00000553544 BRPF1P55201 1214 aaPredicted RBP15.56■□□□□ 0.08
SRP54-203ENST00000553544 TNIP1Q15025 636 aa15.56■□□□□ 0.08
SRP54-203ENST00000553544 SLC10A5Q5PT55 438 aa15.56■□□□□ 0.08
SRP54-203ENST00000553544 MCOLN1Q9GZU1 580 aa15.56■□□□□ 0.08
SRP54-203ENST00000553544 IBTKQ9P2D0 1353 aaPredicted RBP15.55■□□□□ 0.08
SRP54-203ENST00000553544 UBN2Q6ZU65 1347 aa15.55■□□□□ 0.08
SRP54-203ENST00000553544 MYBBP1AQ9BQG0 1328 aaKnown RBP15.55■□□□□ 0.08
SRP54-203ENST00000553544 GMPSP49915 693 aaPredicted RBP15.55■□□□□ 0.08
SRP54-203ENST00000553544 PARP10Q53GL7 1025 aa15.55■□□□□ 0.08
SRP54-203ENST00000553544 GIGYF2Q6Y7W6 1299 aaKnown RBP15.55■□□□□ 0.08
SRP54-203ENST00000553544 CDC37L1Q7L3B6 337 aa15.55■□□□□ 0.08
SRP54-203ENST00000553544 BCL2L13Q9BXK5 485 aa15.55■□□□□ 0.08
SRP54-203ENST00000553544 GLIS2Q9BZE0 524 aaPredicted RBP15.55■□□□□ 0.08
SRP54-203ENST00000553544 KDM3BQ7LBC6 1761 aa15.54■□□□□ 0.08
SRP54-203ENST00000553544 COL4A5P29400 1685 aa15.54■□□□□ 0.08
SRP54-203ENST00000553544 NTSR2O95665 410 aa15.54■□□□□ 0.08
SRP54-203ENST00000553544 EIF4A1P60842 406 aaKnown RBP15.54■□□□□ 0.08
SRP54-203ENST00000553544 CIAPIN1Q6FI81 312 aa15.54■□□□□ 0.08
SRP54-203ENST00000553544 DPP8Q6V1X1 898 aaPredicted RBP15.54■□□□□ 0.08
SRP54-203ENST00000553544 C3orf67Q6ZVT6 689 aa15.54■□□□□ 0.08
SRP54-203ENST00000553544 SP8Q8IXZ3 490 aa15.54■□□□□ 0.08
SRP54-203ENST00000553544 RTFDC1Q9BY42 306 aaPredicted RBP15.54■□□□□ 0.08
SRP54-203ENST00000553544 PNNQ9H307 717 aaKnown RBP15.54■□□□□ 0.08
SRP54-203ENST00000553544 ZNF408Q9H9D4 720 aa15.54■□□□□ 0.08
SRP54-203ENST00000553544 RIC1Q4ADV7 1423 aa15.53■□□□□ 0.08
SRP54-203ENST00000553544 DGKZQ13574 1117 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms