RNA–Protein interactions for RNA: ENST00000553531.1

PTPN21-203, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 3

Gene PTPN21, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-203ENST00000553531 FANCIQ9NVI1 1328 aa15.5■□□□□ 0.07
PTPN21-203ENST00000553531 NPHP1O15259 732 aa15.5■□□□□ 0.07
PTPN21-203ENST00000553531 C21orf2O43822 256 aa15.5■□□□□ 0.07
PTPN21-203ENST00000553531 NPR1P16066 1061 aa15.5■□□□□ 0.07
PTPN21-203ENST00000553531 TCIRG1Q13488 830 aa15.5■□□□□ 0.07
PTPN21-203ENST00000553531 PARP10Q53GL7 1025 aa15.5■□□□□ 0.07
PTPN21-203ENST00000553531 PLBD2Q8NHP8 589 aa15.5■□□□□ 0.07
PTPN21-203ENST00000553531 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
PTPN21-203ENST00000553531 HYPKQ9NX55 129 aa15.5■□□□□ 0.07
PTPN21-203ENST00000553531 SALL2Q9Y467 1007 aaPredicted RBP15.5■□□□□ 0.07
PTPN21-203ENST00000553531 CACNA1FO60840 1977 aa15.49■□□□□ 0.07
PTPN21-203ENST00000553531 ZNF521Q96K83 1311 aa15.49■□□□□ 0.07
PTPN21-203ENST00000553531 COL4A1P02462 1669 aa15.49■□□□□ 0.07
PTPN21-203ENST00000553531 SLC51AQ86UW1 340 aa15.49■□□□□ 0.07
PTPN21-203ENST00000553531 WDR63Q8IWG1 891 aa15.49■□□□□ 0.07
PTPN21-203ENST00000553531 SYNE4Q8N205 404 aa15.49■□□□□ 0.07
PTPN21-203ENST00000553531 CNKSR1Q969H4 720 aa15.49■□□□□ 0.07
PTPN21-203ENST00000553531 ISCA1Q9BUE6 129 aa15.49■□□□□ 0.07
PTPN21-203ENST00000553531 SLC10A5Q5PT55 438 aa15.48■□□□□ 0.07
PTPN21-203ENST00000553531 OLFM4Q6UX06 510 aa15.48■□□□□ 0.07
PTPN21-203ENST00000553531 ANKRD13DQ6ZTN6 518 aa15.48■□□□□ 0.07
PTPN21-203ENST00000553531 RNF181Q9P0P0 153 aa15.48■□□□□ 0.07
PTPN21-203ENST00000553531 ZNF219Q9P2Y4 722 aaPredicted RBP15.48■□□□□ 0.07
PTPN21-203ENST00000553531 LTBP3Q9NS15 1303 aa15.47■□□□□ 0.07
PTPN21-203ENST00000553531 HOXA10P31260 410 aaPredicted RBP15.47■□□□□ 0.07
PTPN21-203ENST00000553531 HSP90AB3PQ58FF7 597 aa15.47■□□□□ 0.07
PTPN21-203ENST00000553531 PPP1R42Q7Z4L9 355 aa15.47■□□□□ 0.07
PTPN21-203ENST00000553531 ZNF526Q8TF50 670 aaPredicted RBP15.47■□□□□ 0.07
PTPN21-203ENST00000553531 UTP14AQ9BVJ6 771 aaKnown RBP15.47■□□□□ 0.07
PTPN21-203ENST00000553531 RNF123Q5XPI4 1314 aa15.46■□□□□ 0.07
PTPN21-203ENST00000553531 GTF2E1P29083 439 aaPredicted RBP15.46■□□□□ 0.07
PTPN21-203ENST00000553531 MAPK8IP2Q13387 824 aaPredicted RBP15.46■□□□□ 0.07
PTPN21-203ENST00000553531 TWISTNBQ3B726 338 aaPredicted RBP15.46■□□□□ 0.07
PTPN21-203ENST00000553531 ZNF428Q96B54 188 aa15.46■□□□□ 0.07
PTPN21-203ENST00000553531 ATP5J2-PTCD1G3V325 749 aa15.45■□□□□ 0.06
PTPN21-203ENST00000553531 KIF3CO14782 793 aa15.45■□□□□ 0.06
PTPN21-203ENST00000553531 LMNB1P20700 586 aa15.45■□□□□ 0.06
PTPN21-203ENST00000553531 CCDC30Q5VVM6 783 aa15.45■□□□□ 0.06
PTPN21-203ENST00000553531 GPBP1L1Q9HC44 474 aaPredicted RBP15.45■□□□□ 0.06
PTPN21-203ENST00000553531 LRRC37AA6NMS7 1700 aa15.45■□□□□ 0.06
PTPN21-203ENST00000553531 COL4A5P29400 1685 aa15.44■□□□□ 0.06
PTPN21-203ENST00000553531 TCERG1O14776 1098 aaKnown RBP15.44■□□□□ 0.06
PTPN21-203ENST00000553531 TRIM28Q13263 835 aaKnown RBP15.44■□□□□ 0.06
PTPN21-203ENST00000553531 G2E3Q7L622 706 aa15.44■□□□□ 0.06
PTPN21-203ENST00000553531 VAMP4O75379 141 aa15.43■□□□□ 0.06
PTPN21-203ENST00000553531 HCLS1P14317 486 aaPredicted RBP15.43■□□□□ 0.06
PTPN21-203ENST00000553531 EXOSC9Q06265 439 aaKnown RBP15.43■□□□□ 0.06
PTPN21-203ENST00000553531 CRAMP1Q96RY5 1269 aa15.43■□□□□ 0.06
PTPN21-203ENST00000553531 NMRK2Q9NPI5 230 aa15.43■□□□□ 0.06
PTPN21-203ENST00000553531 SH3TC1Q8TE82 1336 aa15.43■□□□□ 0.06
PTPN21-203ENST00000553531 ZC3H4Q9UPT8 1303 aaKnown RBP15.43■□□□□ 0.06
PTPN21-203ENST00000553531 CCER2I3L3R5 266 aa15.42■□□□□ 0.06
PTPN21-203ENST00000553531 C1QTNF8P60827 252 aa15.42■□□□□ 0.06
PTPN21-203ENST00000553531 CCDC93Q567U6 631 aa15.42■□□□□ 0.06
PTPN21-203ENST00000553531 TAOK3Q9H2K8 898 aa15.42■□□□□ 0.06
PTPN21-203ENST00000553531 TRMT112Q9UI30 125 aaKnown RBP15.42■□□□□ 0.06
PTPN21-203ENST00000553531 WDR90Q96KV7 1748 aa15.41■□□□□ 0.06
PTPN21-203ENST00000553531 ALDH1B1P30837 517 aa15.41■□□□□ 0.06
PTPN21-203ENST00000553531 GOLGA2Q08379 1002 aa15.41■□□□□ 0.06
PTPN21-203ENST00000553531 SOGA3Q5TF21 947 aa15.41■□□□□ 0.06
PTPN21-203ENST00000553531 RIC3Q7Z5B4 369 aa15.41■□□□□ 0.06
PTPN21-203ENST00000553531 FAM89AQ96GI7 184 aa15.41■□□□□ 0.06
PTPN21-203ENST00000553531 NLRP3Q96P20 1036 aa15.41■□□□□ 0.06
PTPN21-203ENST00000553531 ABCC4O15439 1325 aa15.41■□□□□ 0.06
PTPN21-203ENST00000553531 DUOX1Q9NRD9 1551 aa15.41■□□□□ 0.06
PTPN21-203ENST00000553531 LTBP1Q14766 1721 aa15.4■□□□□ 0.06
PTPN21-203ENST00000553531 RPGRQ92834 1020 aaKnown RBP15.4■□□□□ 0.06
PTPN21-203ENST00000553531 METTL22Q9BUU2 404 aaPredicted RBP15.4■□□□□ 0.06
PTPN21-203ENST00000553531 MYH3P11055 1940 aa15.4■□□□□ 0.06
PTPN21-203ENST00000553531 PI4KAP2A4QPH2 592 aa15.39■□□□□ 0.05
PTPN21-203ENST00000553531 SLC4A2P04920 1241 aa15.39■□□□□ 0.05
PTPN21-203ENST00000553531 IGKV5-2P06315 115 aa15.39■□□□□ 0.05
PTPN21-203ENST00000553531 FKBP4Q02790 459 aaKnown RBP eCLIP15.39■□□□□ 0.05
PTPN21-203ENST00000553531 KSR2Q6VAB6 950 aa15.39■□□□□ 0.05
PTPN21-203ENST00000553531 PI4KAP1Q8N8J0 262 aa15.39■□□□□ 0.05
PTPN21-203ENST00000553531 MYD88Q99836 296 aa15.39■□□□□ 0.05
PTPN21-203ENST00000553531 MAP3K2Q9Y2U5 619 aa15.39■□□□□ 0.05
PTPN21-203ENST00000553531 RBM17Q96I25 401 aaKnown RBP15.38■□□□□ 0.05
PTPN21-203ENST00000553531 STK31Q9BXU1 1019 aa15.38■□□□□ 0.05
PTPN21-203ENST00000553531 CHMP4AQ9BY43 222 aa15.38■□□□□ 0.05
PTPN21-203ENST00000553531 GLTPD2A6NH11 291 aa15.37■□□□□ 0.05
PTPN21-203ENST00000553531 POTECB2RU33 542 aa15.37■□□□□ 0.05
PTPN21-203ENST00000553531 PPEF1O14829 653 aaPredicted RBP15.37■□□□□ 0.05
PTPN21-203ENST00000553531 FLIIQ13045 1269 aa15.37■□□□□ 0.05
PTPN21-203ENST00000553531 SF3B3Q15393 1217 aaKnown RBP15.37■□□□□ 0.05
PTPN21-203ENST00000553531 RTL5Q5HYW3 569 aaPredicted RBP15.37■□□□□ 0.05
PTPN21-203ENST00000553531 ZBTB38Q8NAP3 1195 aaPredicted RBP15.37■□□□□ 0.05
PTPN21-203ENST00000553531 CCDC191Q8NCU4 936 aa15.37■□□□□ 0.05
PTPN21-203ENST00000553531 MYH16Q9H6N6 1097 aa15.37■□□□□ 0.05
PTPN21-203ENST00000553531 ZNF277Q9NRM2 450 aaPredicted RBP15.37■□□□□ 0.05
PTPN21-203ENST00000553531 DDX58O95786 925 aaKnown RBP15.36■□□□□ 0.05
PTPN21-203ENST00000553531 RTKN2Q8IZC4 609 aa15.36■□□□□ 0.05
PTPN21-203ENST00000553531 JARID2Q92833 1246 aaPredicted RBP15.36■□□□□ 0.05
PTPN21-203ENST00000553531 PSMD1Q99460 953 aa15.36■□□□□ 0.05
PTPN21-203ENST00000553531 ATP6V0A2Q9Y487 856 aa15.36■□□□□ 0.05
PTPN21-203ENST00000553531 KDM2BQ8NHM5 1336 aa15.36■□□□□ 0.05
PTPN21-203ENST00000553531 IRS4O14654 1257 aaPredicted RBP15.35■□□□□ 0.05
PTPN21-203ENST00000553531 PCCAP05165 728 aaPredicted RBP15.35■□□□□ 0.05
PTPN21-203ENST00000553531 CC2D2BQ6DHV5 1058 aa15.35■□□□□ 0.05
PTPN21-203ENST00000553531 SPEF2Q9C093 1822 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms