RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 TNRC6CQ9HCJ0 1690 aaKnown RBP30.43■■■□□ 2.46
TDP1-205ENST00000553527 KLRG2A4D1S0 409 aaPredicted RBP30.43■■■□□ 2.46
TDP1-205ENST00000553527 RNF181Q9P0P0 153 aa30.43■■■□□ 2.46
TDP1-205ENST00000553527 TWISTNBQ3B726 338 aaPredicted RBP30.42■■■□□ 2.46
TDP1-205ENST00000553527 RIC3Q7Z5B4 369 aa30.42■■■□□ 2.46
TDP1-205ENST00000553527 GPBP1L1Q9HC44 474 aaPredicted RBP30.42■■■□□ 2.46
TDP1-205ENST00000553527 NLRP10Q86W26 655 aa30.41■■■□□ 2.46
TDP1-205ENST00000553527 FANCIQ9NVI1 1328 aa30.41■■■□□ 2.46
TDP1-205ENST00000553527 ATP5J2-PTCD1G3V325 749 aa30.4■■■□□ 2.46
TDP1-205ENST00000553527 CHMP4AQ9BY43 222 aa30.4■■■□□ 2.46
TDP1-205ENST00000553527 IBTKQ9P2D0 1353 aaPredicted RBP30.4■■■□□ 2.46
TDP1-205ENST00000553527 GOLGA2Q08379 1002 aa30.39■■■□□ 2.46
TDP1-205ENST00000553527 RPGRQ92834 1020 aaKnown RBP30.39■■■□□ 2.46
TDP1-205ENST00000553527 TRMT112Q9UI30 125 aaKnown RBP30.39■■■□□ 2.46
TDP1-205ENST00000553527 ARFGEF2Q9Y6D5 1785 aa30.38■■■□□ 2.45
TDP1-205ENST00000553527 SYNE4Q8N205 404 aa30.38■■■□□ 2.45
TDP1-205ENST00000553527 SPINK5Q9NQ38 1064 aaPredicted RBP30.38■■■□□ 2.45
TDP1-205ENST00000553527 ALDH1B1P30837 517 aa30.37■■■□□ 2.45
TDP1-205ENST00000553527 STK31Q9BXU1 1019 aa30.37■■■□□ 2.45
TDP1-205ENST00000553527 FER1L6Q2WGJ9 1857 aa30.36■■■□□ 2.45
TDP1-205ENST00000553527 NFKBIEO00221 500 aa30.36■■■□□ 2.45
TDP1-205ENST00000553527 NLRP3Q96P20 1036 aa30.36■■■□□ 2.45
TDP1-205ENST00000553527 HCLS1P14317 486 aaPredicted RBP30.35■■■□□ 2.45
TDP1-205ENST00000553527 LMNB1P20700 586 aa30.35■■■□□ 2.45
TDP1-205ENST00000553527 PRELPP51888 382 aa30.35■■■□□ 2.45
TDP1-205ENST00000553527 EXOSC9Q06265 439 aaKnown RBP30.35■■■□□ 2.45
TDP1-205ENST00000553527 C3orf67Q6ZVT6 689 aa30.35■■■□□ 2.45
TDP1-205ENST00000553527 CRY2Q49AN0 593 aa30.34■■■□□ 2.45
TDP1-205ENST00000553527 OLFM4Q6UX06 510 aa30.34■■■□□ 2.45
TDP1-205ENST00000553527 ISCA1Q9BUE6 129 aa30.34■■■□□ 2.45
TDP1-205ENST00000553527 RTL5Q5HYW3 569 aaPredicted RBP30.33■■■□□ 2.45
TDP1-205ENST00000553527 MYD88Q99836 296 aa30.33■■■□□ 2.45
TDP1-205ENST00000553527 SH3TC1Q8TE82 1336 aa30.32■■■□□ 2.44
TDP1-205ENST00000553527 DDX58O95786 925 aaKnown RBP30.32■■■□□ 2.44
TDP1-205ENST00000553527 SLC10A5Q5PT55 438 aa30.32■■■□□ 2.44
TDP1-205ENST00000553527 SLC4A2P04920 1241 aa30.31■■■□□ 2.44
TDP1-205ENST00000553527 SOGA3Q5TF21 947 aa30.31■■■□□ 2.44
TDP1-205ENST00000553527 C7orf43Q8WVR3 580 aa30.31■■■□□ 2.44
TDP1-205ENST00000553527 RBM17Q96I25 401 aaKnown RBP30.31■■■□□ 2.44
TDP1-205ENST00000553527 TAOK3Q9H2K8 898 aa30.31■■■□□ 2.44
TDP1-205ENST00000553527 MYH16Q9H6N6 1097 aa30.31■■■□□ 2.44
TDP1-205ENST00000553527 FAM89AQ96GI7 184 aa30.3■■■□□ 2.44
TDP1-205ENST00000553527 RIC1Q4ADV7 1423 aa30.3■■■□□ 2.44
TDP1-205ENST00000553527 RNF123Q5XPI4 1314 aa30.29■■■□□ 2.44
TDP1-205ENST00000553527 LAMB2P55268 1798 aa30.29■■■□□ 2.44
TDP1-205ENST00000553527 VAMP4O75379 141 aa30.29■■■□□ 2.44
TDP1-205ENST00000553527 CCDC93Q567U6 631 aa30.29■■■□□ 2.44
TDP1-205ENST00000553527 G2E3Q7L622 706 aa30.29■■■□□ 2.44
TDP1-205ENST00000553527 HOXA10P31260 410 aaPredicted RBP30.28■■■□□ 2.44
TDP1-205ENST00000553527 MAP3K2Q9Y2U5 619 aa30.28■■■□□ 2.44
TDP1-205ENST00000553527 PI4KAP2A4QPH2 592 aa30.26■■■□□ 2.43
TDP1-205ENST00000553527 PI4KAP1Q8N8J0 262 aa30.26■■■□□ 2.43
TDP1-205ENST00000553527 CRAMP1Q96RY5 1269 aa30.26■■■□□ 2.43
TDP1-205ENST00000553527 DICER1Q9UPY3 1922 aaKnown RBP30.26■■■□□ 2.43
TDP1-205ENST00000553527 TAF1P21675 1872 aa30.25■■■□□ 2.43
TDP1-205ENST00000553527 CACNA1FO60840 1977 aa30.25■■■□□ 2.43
TDP1-205ENST00000553527 C1QTNF8P60827 252 aa30.25■■■□□ 2.43
TDP1-205ENST00000553527 KSR2Q6VAB6 950 aa30.25■■■□□ 2.43
TDP1-205ENST00000553527 METTL22Q9BUU2 404 aaPredicted RBP30.25■■■□□ 2.43
TDP1-205ENST00000553527 TRIM28Q13263 835 aaKnown RBP30.24■■■□□ 2.43
TDP1-205ENST00000553527 NMRK2Q9NPI5 230 aa30.24■■■□□ 2.43
TDP1-205ENST00000553527 ZNF521Q96K83 1311 aa30.23■■■□□ 2.43
TDP1-205ENST00000553527 TIAM2Q8IVF5 1701 aa30.23■■■□□ 2.43
TDP1-205ENST00000553527 DDX60Q8IY21 1712 aaKnown RBP30.23■■■□□ 2.43
TDP1-205ENST00000553527 PPEF1O14829 653 aaPredicted RBP30.23■■■□□ 2.43
TDP1-205ENST00000553527 RTKN2Q8IZC4 609 aa30.23■■■□□ 2.43
TDP1-205ENST00000553527 JARID2Q92833 1246 aaPredicted RBP30.23■■■□□ 2.43
TDP1-205ENST00000553527 LTBP3Q9NS15 1303 aa30.22■■■□□ 2.43
TDP1-205ENST00000553527 SLC51AQ86UW1 340 aa30.22■■■□□ 2.43
TDP1-205ENST00000553527 KDM2BQ8NHM5 1336 aa30.22■■■□□ 2.43
TDP1-205ENST00000553527 FKBP4Q02790 459 aaKnown RBP eCLIP30.21■■■□□ 2.43
TDP1-205ENST00000553527 ZNF277Q9NRM2 450 aaPredicted RBP30.21■■■□□ 2.43
TDP1-205ENST00000553527 ABCC4O15439 1325 aa30.21■■■□□ 2.43
TDP1-205ENST00000553527 IRS4O14654 1257 aaPredicted RBP30.2■■■□□ 2.43
TDP1-205ENST00000553527 FLIIQ13045 1269 aa30.2■■■□□ 2.43
TDP1-205ENST00000553527 DDX46Q7L014 1031 aaKnown RBP30.2■■■□□ 2.43
TDP1-205ENST00000553527 ZBTB38Q8NAP3 1195 aaPredicted RBP30.2■■■□□ 2.43
TDP1-205ENST00000553527 CCDC191Q8NCU4 936 aa30.2■■■□□ 2.43
TDP1-205ENST00000553527 CWC25Q9NXE8 425 aaPredicted RBP30.2■■■□□ 2.43
TDP1-205ENST00000553527 KIF3CO14782 793 aa30.19■■■□□ 2.42
TDP1-205ENST00000553527 NEXNQ0ZGT2 675 aa30.19■■■□□ 2.42
TDP1-205ENST00000553527 FKBP5Q13451 457 aaPredicted RBP30.19■■■□□ 2.42
TDP1-205ENST00000553527 TMX4Q9H1E5 349 aaPredicted RBP30.19■■■□□ 2.42
TDP1-205ENST00000553527 RRAGCQ9HB90 399 aa30.19■■■□□ 2.42
TDP1-205ENST00000553527 ZC3H4Q9UPT8 1303 aaKnown RBP30.17■■■□□ 2.42
TDP1-205ENST00000553527 CWF19L2Q2TBE0 894 aaKnown RBP30.16■■■□□ 2.42
TDP1-205ENST00000553527 CC2D2BQ6DHV5 1058 aa30.16■■■□□ 2.42
TDP1-205ENST00000553527 GLTPD2A6NH11 291 aa30.15■■■□□ 2.42
TDP1-205ENST00000553527 IGKV5-2P06315 115 aa30.15■■■□□ 2.42
TDP1-205ENST00000553527 DPY19L2Q6NUT2 758 aa30.15■■■□□ 2.42
TDP1-205ENST00000553527 E9PSI1 815 aa30.14■■■□□ 2.42
TDP1-205ENST00000553527 BBOX1O75936 387 aa30.14■■■□□ 2.42
TDP1-205ENST00000553527 PCCAP05165 728 aaPredicted RBP30.14■■■□□ 2.42
TDP1-205ENST00000553527 CDCA7LQ96GN5 454 aa30.14■■■□□ 2.42
TDP1-205ENST00000553527 ATP6V0A2Q9Y487 856 aa30.14■■■□□ 2.42
TDP1-205ENST00000553527 IARSP41252 1262 aaKnown RBP30.13■■■□□ 2.41
TDP1-205ENST00000553527 GRAPQ13588 217 aa30.13■■■□□ 2.41
TDP1-205ENST00000553527 SF3B3Q15393 1217 aaKnown RBP30.13■■■□□ 2.41
TDP1-205ENST00000553527 GRAPLQ8TC17 118 aaPredicted RBP30.13■■■□□ 2.41
TDP1-205ENST00000553527 HNRNPUQ00839 825 aaKnown RBP eCLIP30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 303.9 ms