RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 RIC3Q7Z5B4 369 aa23.68■■□□□ 1.38
CPSF2-202ENST00000553427 TTLL6Q8N841 843 aa23.68■■□□□ 1.38
CPSF2-202ENST00000553427 TNRC6CQ9HCJ0 1690 aaKnown RBP23.67■■□□□ 1.38
CPSF2-202ENST00000553427 CHD4Q14839 1912 aa23.67■■□□□ 1.38
CPSF2-202ENST00000553427 CRY2Q49AN0 593 aa23.67■■□□□ 1.38
CPSF2-202ENST00000553427 ERFEQ4G0M1 354 aa23.67■■□□□ 1.38
CPSF2-202ENST00000553427 NUTM1Q86Y26 1132 aa23.67■■□□□ 1.38
CPSF2-202ENST00000553427 MASTLQ96GX5 879 aa23.67■■□□□ 1.38
CPSF2-202ENST00000553427 SLC10A5Q5PT55 438 aa23.66■■□□□ 1.38
CPSF2-202ENST00000553427 KSR2Q6VAB6 950 aa23.66■■□□□ 1.38
CPSF2-202ENST00000553427 ADCY9O60503 1353 aa23.65■■□□□ 1.38
CPSF2-202ENST00000553427 TCERG1O14776 1098 aaKnown RBP23.65■■□□□ 1.38
CPSF2-202ENST00000553427 NPR1P16066 1061 aa23.65■■□□□ 1.38
CPSF2-202ENST00000553427 FLIIQ13045 1269 aa23.65■■□□□ 1.38
CPSF2-202ENST00000553427 CNKSR1Q969H4 720 aa23.65■■□□□ 1.38
CPSF2-202ENST00000553427 CDCA7LQ96GN5 454 aa23.65■■□□□ 1.38
CPSF2-202ENST00000553427 METTL22Q9BUU2 404 aaPredicted RBP23.65■■□□□ 1.38
CPSF2-202ENST00000553427 SH3TC1Q8TE82 1336 aa23.64■■□□□ 1.38
CPSF2-202ENST00000553427 G2E3Q7L622 706 aa23.64■■□□□ 1.37
CPSF2-202ENST00000553427 ZNF622Q969S3 477 aaKnown RBP eCLIP23.64■■□□□ 1.37
CPSF2-202ENST00000553427 ZNF428Q96B54 188 aa23.64■■□□□ 1.37
CPSF2-202ENST00000553427 TRMT112Q9UI30 125 aaKnown RBP23.63■■□□□ 1.37
CPSF2-202ENST00000553427 PI4KAP2A4QPH2 592 aa23.62■■□□□ 1.37
CPSF2-202ENST00000553427 ATP5J2-PTCD1G3V325 749 aa23.62■■□□□ 1.37
CPSF2-202ENST00000553427 YY1P25490 414 aa23.62■■□□□ 1.37
CPSF2-202ENST00000553427 PI4KAP1Q8N8J0 262 aa23.62■■□□□ 1.37
CPSF2-202ENST00000553427 CCDC191Q8NCU4 936 aa23.62■■□□□ 1.37
CPSF2-202ENST00000553427 MAP3K2Q9Y2U5 619 aa23.62■■□□□ 1.37
CPSF2-202ENST00000553427 CT47B1P0C2W7 299 aaPredicted RBP23.61■■□□□ 1.37
CPSF2-202ENST00000553427 HOXA10P31260 410 aaPredicted RBP23.61■■□□□ 1.37
CPSF2-202ENST00000553427 HNRNPUQ00839 825 aaKnown RBP eCLIP23.6■■□□□ 1.37
CPSF2-202ENST00000553427 MYD88Q99836 296 aa23.6■■□□□ 1.37
CPSF2-202ENST00000553427 FKBP5Q13451 457 aaPredicted RBP23.59■■□□□ 1.37
CPSF2-202ENST00000553427 PRPF40BQ6NWY9 871 aaKnown RBP23.59■■□□□ 1.37
CPSF2-202ENST00000553427 NLRP3Q96P20 1036 aa23.59■■□□□ 1.37
CPSF2-202ENST00000553427 NEXNQ0ZGT2 675 aa23.58■■□□□ 1.37
CPSF2-202ENST00000553427 ARHGAP27Q6ZUM4 889 aa23.58■■□□□ 1.37
CPSF2-202ENST00000553427 CWC25Q9NXE8 425 aaPredicted RBP23.58■■□□□ 1.37
CPSF2-202ENST00000553427 IGKV5-2P06315 115 aa23.57■■□□□ 1.36
CPSF2-202ENST00000553427 ALDH1B1P30837 517 aa23.57■■□□□ 1.36
CPSF2-202ENST00000553427 SOGA3Q5TF21 947 aa23.57■■□□□ 1.36
CPSF2-202ENST00000553427 C3orf67Q6ZVT6 689 aa23.57■■□□□ 1.36
CPSF2-202ENST00000553427 ZBTB38Q8NAP3 1195 aaPredicted RBP23.57■■□□□ 1.36
CPSF2-202ENST00000553427 LAMB2P55268 1798 aa23.57■■□□□ 1.36
CPSF2-202ENST00000553427 SLX4Q8IY92 1834 aa23.56■■□□□ 1.36
CPSF2-202ENST00000553427 ALDH1L2Q3SY69 923 aa23.56■■□□□ 1.36
CPSF2-202ENST00000553427 C7orf43Q8WVR3 580 aa23.56■■□□□ 1.36
CPSF2-202ENST00000553427 DNAAF4Q8WXU2 420 aa23.56■■□□□ 1.36
CPSF2-202ENST00000553427 RPGRQ92834 1020 aaKnown RBP23.56■■□□□ 1.36
CPSF2-202ENST00000553427 CRAMP1Q96RY5 1269 aa23.56■■□□□ 1.36
CPSF2-202ENST00000553427 ZBED9Q6R2W3 1325 aa23.56■■□□□ 1.36
CPSF2-202ENST00000553427 DDX60Q8IY21 1712 aaKnown RBP23.56■■□□□ 1.36
CPSF2-202ENST00000553427 PCCAP05165 728 aaPredicted RBP23.55■■□□□ 1.36
CPSF2-202ENST00000553427 HCLS1P14317 486 aaPredicted RBP23.55■■□□□ 1.36
CPSF2-202ENST00000553427 HSP90B1P14625 803 aaKnown RBP23.55■■□□□ 1.36
CPSF2-202ENST00000553427 SYNE4Q8N205 404 aa23.55■■□□□ 1.36
CPSF2-202ENST00000553427 FAM89AQ96GI7 184 aa23.55■■□□□ 1.36
CPSF2-202ENST00000553427 NEURL1BA8MQ27 555 aa23.54■■□□□ 1.36
CPSF2-202ENST00000553427 MRPL50Q8N5N7 158 aaKnown RBP23.54■■□□□ 1.36
CPSF2-202ENST00000553427 RBM17Q96I25 401 aaKnown RBP23.54■■□□□ 1.36
CPSF2-202ENST00000553427 C21orf2O43822 256 aa23.53■■□□□ 1.36
CPSF2-202ENST00000553427 LINS1Q8NG48 757 aa23.53■■□□□ 1.36
CPSF2-202ENST00000553427 SSH1Q8WYL5 1049 aa23.53■■□□□ 1.36
CPSF2-202ENST00000553427 LTBP3Q9NS15 1303 aa23.53■■□□□ 1.36
CPSF2-202ENST00000553427 IRS4O14654 1257 aaPredicted RBP23.52■■□□□ 1.36
CPSF2-202ENST00000553427 CDHR2Q9BYE9 1310 aa23.52■■□□□ 1.36
CPSF2-202ENST00000553427 NFKBIEO00221 500 aa23.51■■□□□ 1.35
CPSF2-202ENST00000553427 SF3B3Q15393 1217 aaKnown RBP23.51■■□□□ 1.35
CPSF2-202ENST00000553427 PTPRCP08575 1304 aa23.51■■□□□ 1.35
CPSF2-202ENST00000553427 CACNA1SQ13698 1873 aa23.51■■□□□ 1.35
CPSF2-202ENST00000553427 FER1L6Q2WGJ9 1857 aa23.51■■□□□ 1.35
CPSF2-202ENST00000553427 CWF19L2Q2TBE0 894 aaKnown RBP23.5■■□□□ 1.35
CPSF2-202ENST00000553427 CCDC93Q567U6 631 aa23.5■■□□□ 1.35
CPSF2-202ENST00000553427 CC2D2BQ6DHV5 1058 aa23.5■■□□□ 1.35
CPSF2-202ENST00000553427 SNED1Q8TER0 1413 aa23.5■■□□□ 1.35
CPSF2-202ENST00000553427 BRPF1P55201 1214 aaPredicted RBP23.49■■□□□ 1.35
CPSF2-202ENST00000553427 GCKRQ14397 625 aa23.49■■□□□ 1.35
CPSF2-202ENST00000553427 ABCC4O15439 1325 aa23.49■■□□□ 1.35
CPSF2-202ENST00000553427 BEND3Q5T5X7 828 aa23.48■■□□□ 1.35
CPSF2-202ENST00000553427 F6X3S4 739 aa23.47■■□□□ 1.35
CPSF2-202ENST00000553427 H7C1W4 665 aa23.47■■□□□ 1.35
CPSF2-202ENST00000553427 PDE8AO60658 829 aa23.47■■□□□ 1.35
CPSF2-202ENST00000553427 LMNB1P20700 586 aa23.47■■□□□ 1.35
CPSF2-202ENST00000553427 RASSF7Q02833 373 aa23.47■■□□□ 1.35
CPSF2-202ENST00000553427 GRIPAP1Q4V328 841 aa23.47■■□□□ 1.35
CPSF2-202ENST00000553427 RTL5Q5HYW3 569 aaPredicted RBP23.47■■□□□ 1.35
CPSF2-202ENST00000553427 C9orf131Q5VYM1 1079 aa23.47■■□□□ 1.35
CPSF2-202ENST00000553427 DDX46Q7L014 1031 aaKnown RBP23.47■■□□□ 1.35
CPSF2-202ENST00000553427 TAOK3Q9H2K8 898 aa23.47■■□□□ 1.35
CPSF2-202ENST00000553427 SMC4Q9NTJ3 1288 aa23.47■■□□□ 1.35
CPSF2-202ENST00000553427 ZNF219Q9P2Y4 722 aaPredicted RBP23.47■■□□□ 1.35
CPSF2-202ENST00000553427 ZC3H4Q9UPT8 1303 aaKnown RBP23.47■■□□□ 1.35
CPSF2-202ENST00000553427 PPEF1O14829 653 aaPredicted RBP23.46■■□□□ 1.35
CPSF2-202ENST00000553427 BBOX1O75936 387 aa23.46■■□□□ 1.35
CPSF2-202ENST00000553427 SBF1O95248 1867 aa23.46■■□□□ 1.35
CPSF2-202ENST00000553427 GRAPQ13588 217 aa23.46■■□□□ 1.35
CPSF2-202ENST00000553427 RTKN2Q8IZC4 609 aa23.46■■□□□ 1.35
CPSF2-202ENST00000553427 ZNF784Q8NCA9 323 aaPredicted RBP23.46■■□□□ 1.35
CPSF2-202ENST00000553427 GRAPLQ8TC17 118 aaPredicted RBP23.46■■□□□ 1.35
CPSF2-202ENST00000553427 TMC4Q7Z404 712 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms