RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 CASP7P55210 303 aa18.87■□□□□ 0.61
MTHFD1-204ENST00000553405 RNF123Q5XPI4 1314 aa18.87■□□□□ 0.61
MTHFD1-204ENST00000553405 ZKSCAN2Q63HK3 967 aa18.87■□□□□ 0.61
MTHFD1-204ENST00000553405 DDX60Q8IY21 1712 aaKnown RBP18.87■□□□□ 0.61
MTHFD1-204ENST00000553405 SYNE4Q8N205 404 aa18.87■□□□□ 0.61
MTHFD1-204ENST00000553405 LAMB2P55268 1798 aa18.86■□□□□ 0.61
MTHFD1-204ENST00000553405 IPO8O15397 1037 aaKnown RBP18.86■□□□□ 0.61
MTHFD1-204ENST00000553405 RLBP1P12271 317 aa18.86■□□□□ 0.61
MTHFD1-204ENST00000553405 GCKRQ14397 625 aa18.86■□□□□ 0.61
MTHFD1-204ENST00000553405 NBPF5PQ86XG9 351 aaPredicted RBP18.86■□□□□ 0.61
MTHFD1-204ENST00000553405 FRAT1Q92837 279 aaPredicted RBP18.86■□□□□ 0.61
MTHFD1-204ENST00000553405 CWC25Q9NXE8 425 aaPredicted RBP18.86■□□□□ 0.61
MTHFD1-204ENST00000553405 ALDH1L1O75891 902 aa18.85■□□□□ 0.61
MTHFD1-204ENST00000553405 NEXNQ0ZGT2 675 aa18.85■□□□□ 0.61
MTHFD1-204ENST00000553405 ERFEQ4G0M1 354 aa18.85■□□□□ 0.61
MTHFD1-204ENST00000553405 SLC10A5Q5PT55 438 aa18.85■□□□□ 0.61
MTHFD1-204ENST00000553405 INTS3Q68E01 1043 aaKnown RBP18.85■□□□□ 0.61
MTHFD1-204ENST00000553405 NUTM1Q86Y26 1132 aa18.85■□□□□ 0.61
MTHFD1-204ENST00000553405 CNBD1Q8NA66 436 aa18.85■□□□□ 0.61
MTHFD1-204ENST00000553405 UTP14AQ9BVJ6 771 aaKnown RBP18.85■□□□□ 0.61
MTHFD1-204ENST00000553405 COL11A2P13942 1736 aaPredicted RBP18.85■□□□□ 0.61
MTHFD1-204ENST00000553405 KLRG2A4D1S0 409 aaPredicted RBP18.84■□□□□ 0.61
MTHFD1-204ENST00000553405 FAM177BA6PVY3 158 aa18.84■□□□□ 0.61
MTHFD1-204ENST00000553405 H7C1W4 665 aa18.84■□□□□ 0.61
MTHFD1-204ENST00000553405 PLIN1O60240 522 aa18.84■□□□□ 0.61
MTHFD1-204ENST00000553405 SLC4A10Q6U841 1118 aa18.84■□□□□ 0.61
MTHFD1-204ENST00000553405 TPTE2Q6XPS3 522 aa18.84■□□□□ 0.61
MTHFD1-204ENST00000553405 PPP1R42Q7Z4L9 355 aa18.84■□□□□ 0.61
MTHFD1-204ENST00000553405 CCDC24Q8N4L8 307 aa18.84■□□□□ 0.61
MTHFD1-204ENST00000553405 SRCIN1Q9C0H9 1055 aa18.84■□□□□ 0.61
MTHFD1-204ENST00000553405 NYXQ9GZU5 481 aa18.84■□□□□ 0.61
MTHFD1-204ENST00000553405 GOLGB1Q14789 3259 aaKnown RBP18.84■□□□□ 0.61
MTHFD1-204ENST00000553405 UTYO14607 1347 aa18.83■□□□□ 0.61
MTHFD1-204ENST00000553405 PCCAP05165 728 aaPredicted RBP18.83■□□□□ 0.6
MTHFD1-204ENST00000553405 C3orf67Q6ZVT6 689 aa18.83■□□□□ 0.6
MTHFD1-204ENST00000553405 ZBTB38Q8NAP3 1195 aaPredicted RBP18.83■□□□□ 0.6
MTHFD1-204ENST00000553405 FAM89AQ96GI7 184 aa18.83■□□□□ 0.6
MTHFD1-204ENST00000553405 TRMT112Q9UI30 125 aaKnown RBP18.83■□□□□ 0.6
MTHFD1-204ENST00000553405 SH3TC1Q8TE82 1336 aa18.82■□□□□ 0.6
MTHFD1-204ENST00000553405 CDHR2Q9BYE9 1310 aa18.82■□□□□ 0.6
MTHFD1-204ENST00000553405 CCT4P50991 539 aaKnown RBP18.82■□□□□ 0.6
MTHFD1-204ENST00000553405 CLUAP1Q96AJ1 413 aa18.82■□□□□ 0.6
MTHFD1-204ENST00000553405 CD2APQ9Y5K6 639 aa18.82■□□□□ 0.6
MTHFD1-204ENST00000553405 DLEC1Q9Y238 1755 aa18.81■□□□□ 0.6
MTHFD1-204ENST00000553405 C20orf194Q5TEA3 1177 aa18.81■□□□□ 0.6
MTHFD1-204ENST00000553405 TMEM57Q8N5G2 664 aa18.81■□□□□ 0.6
MTHFD1-204ENST00000553405 JARID2Q92833 1246 aaPredicted RBP18.81■□□□□ 0.6
MTHFD1-204ENST00000553405 BRIP1Q9BX63 1249 aa18.81■□□□□ 0.6
MTHFD1-204ENST00000553405 USP44Q9H0E7 712 aa18.81■□□□□ 0.6
MTHFD1-204ENST00000553405 RRP1P56182 461 aaKnown RBP18.8■□□□□ 0.6
MTHFD1-204ENST00000553405 DZIP1LQ8IYY4 767 aaKnown RBP18.8■□□□□ 0.6
MTHFD1-204ENST00000553405 PANK1Q8TE04 598 aa18.8■□□□□ 0.6
MTHFD1-204ENST00000553405 KAZALD1Q96I82 304 aa18.8■□□□□ 0.6
MTHFD1-204ENST00000553405 FHDC1Q9C0D6 1143 aaPredicted RBP18.8■□□□□ 0.6
MTHFD1-204ENST00000553405 BRCA1P38398 1863 aaKnown RBP18.8■□□□□ 0.6
MTHFD1-204ENST00000553405 GRM8O00222 908 aa18.79■□□□□ 0.6
MTHFD1-204ENST00000553405 NBPF7P0C2Y1 421 aaPredicted RBP18.79■□□□□ 0.6
MTHFD1-204ENST00000553405 CRY2Q49AN0 593 aa18.79■□□□□ 0.6
MTHFD1-204ENST00000553405 PLA2G12BQ9BX93 195 aa18.79■□□□□ 0.6
MTHFD1-204ENST00000553405 COL4A1P02462 1669 aa18.79■□□□□ 0.6
MTHFD1-204ENST00000553405 HCLS1P14317 486 aaPredicted RBP18.78■□□□□ 0.6
MTHFD1-204ENST00000553405 KCNA3P22001 575 aa18.78■□□□□ 0.6
MTHFD1-204ENST00000553405 ST5P78524 1137 aa18.78■□□□□ 0.6
MTHFD1-204ENST00000553405 PDE3AQ14432 1141 aa18.78■□□□□ 0.6
MTHFD1-204ENST00000553405 RTL5Q5HYW3 569 aaPredicted RBP18.78■□□□□ 0.6
MTHFD1-204ENST00000553405 UBE3BQ7Z3V4 1068 aa18.78■□□□□ 0.6
MTHFD1-204ENST00000553405 NLGN2Q8NFZ4 835 aa18.78■□□□□ 0.6
MTHFD1-204ENST00000553405 IRS4O14654 1257 aaPredicted RBP18.77■□□□□ 0.6
MTHFD1-204ENST00000553405 SYT17Q9BSW7 474 aa18.77■□□□□ 0.6
MTHFD1-204ENST00000553405 EPHA10Q5JZY3 1008 aa18.76■□□□□ 0.59
MTHFD1-204ENST00000553405 MEIS3Q99687 375 aa18.76■□□□□ 0.59
MTHFD1-204ENST00000553405 MYH3P11055 1940 aa18.75■□□□□ 0.59
MTHFD1-204ENST00000553405 SRGNP10124 158 aa18.75■□□□□ 0.59
MTHFD1-204ENST00000553405 DPEP1P16444 411 aa18.75■□□□□ 0.59
MTHFD1-204ENST00000553405 CHRNA5P30532 468 aa18.75■□□□□ 0.59
MTHFD1-204ENST00000553405 TGFB2P61812 414 aa18.75■□□□□ 0.59
MTHFD1-204ENST00000553405 FOXO4P98177 505 aa18.75■□□□□ 0.59
MTHFD1-204ENST00000553405 SF3B3Q15393 1217 aaKnown RBP18.75■□□□□ 0.59
MTHFD1-204ENST00000553405 UTRNP46939 3433 aa18.75■□□□□ 0.59
MTHFD1-204ENST00000553405 GTF2E1P29083 439 aaPredicted RBP18.74■□□□□ 0.59
MTHFD1-204ENST00000553405 HOXA10P31260 410 aaPredicted RBP18.74■□□□□ 0.59
MTHFD1-204ENST00000553405 PDE6BP35913 854 aa18.74■□□□□ 0.59
MTHFD1-204ENST00000553405 FTSJ3Q8IY81 847 aaKnown RBP18.74■□□□□ 0.59
MTHFD1-204ENST00000553405 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.74■□□□□ 0.59
MTHFD1-204ENST00000553405 A0A0G2JLW4 131 aa18.73■□□□□ 0.59
MTHFD1-204ENST00000553405 ZBTB7BO15156 539 aaPredicted RBP18.73■□□□□ 0.59
MTHFD1-204ENST00000553405 PDE8AO60658 829 aa18.73■□□□□ 0.59
MTHFD1-204ENST00000553405 CSF1RP07333 972 aa18.73■□□□□ 0.59
MTHFD1-204ENST00000553405 MS4A1P11836 297 aa18.73■□□□□ 0.59
MTHFD1-204ENST00000553405 ANKRD44Q8N8A2 993 aa18.73■□□□□ 0.59
MTHFD1-204ENST00000553405 SUCLG2Q96I99 432 aa18.73■□□□□ 0.59
MTHFD1-204ENST00000553405 C9orf78Q9NZ63 289 aaPredicted RBP18.73■□□□□ 0.59
MTHFD1-204ENST00000553405 PPP1R1BQ9UD71 204 aaPredicted RBP18.73■□□□□ 0.59
MTHFD1-204ENST00000553405 RTL9Q8NET4 1388 aa18.72■□□□□ 0.59
MTHFD1-204ENST00000553405 MVPQ14764 893 aaKnown RBP18.72■□□□□ 0.59
MTHFD1-204ENST00000553405 RABL6Q3YEC7 729 aaPredicted RBP18.72■□□□□ 0.59
MTHFD1-204ENST00000553405 C2CD5Q86YS7 1000 aa18.72■□□□□ 0.59
MTHFD1-204ENST00000553405 TTLL11Q8NHH1 800 aa18.72■□□□□ 0.59
MTHFD1-204ENST00000553405 NLRP3Q96P20 1036 aa18.72■□□□□ 0.59
MTHFD1-204ENST00000553405 PDZRN3Q9UPQ7 1066 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms