RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 UTP14AQ9BVJ6 771 aaKnown RBP23.28■■□□□ 1.32
PNN-202ENST00000553331 IFT57Q9NWB7 429 aa23.28■■□□□ 1.32
PNN-202ENST00000553331 IBTKQ9P2D0 1353 aaPredicted RBP23.27■■□□□ 1.32
PNN-202ENST00000553331 ANKRD36CQ5JPF3 1778 aa23.27■■□□□ 1.32
PNN-202ENST00000553331 MRS2Q9HD23 443 aa23.27■■□□□ 1.32
PNN-202ENST00000553331 LTBP3Q9NS15 1303 aa23.27■■□□□ 1.32
PNN-202ENST00000553331 HOXB7P09629 217 aa23.26■■□□□ 1.31
PNN-202ENST00000553331 ZNF853P0CG23 659 aa23.26■■□□□ 1.31
PNN-202ENST00000553331 HSP90AB3PQ58FF7 597 aa23.26■■□□□ 1.31
PNN-202ENST00000553331 TCERG1O14776 1098 aaKnown RBP23.25■■□□□ 1.31
PNN-202ENST00000553331 CRY2Q49AN0 593 aa23.25■■□□□ 1.31
PNN-202ENST00000553331 DPY19L2Q6NUT2 758 aa23.25■■□□□ 1.31
PNN-202ENST00000553331 C3orf67Q6ZVT6 689 aa23.25■■□□□ 1.31
PNN-202ENST00000553331 DBF4Q9UBU7 674 aaPredicted RBP23.25■■□□□ 1.31
PNN-202ENST00000553331 TCIRG1Q13488 830 aa23.24■■□□□ 1.31
PNN-202ENST00000553331 RBM46Q8TBY0 533 aaKnown RBP23.24■■□□□ 1.31
PNN-202ENST00000553331 RBM17Q96I25 401 aaKnown RBP23.24■■□□□ 1.31
PNN-202ENST00000553331 ZNF277Q9NRM2 450 aaPredicted RBP23.24■■□□□ 1.31
PNN-202ENST00000553331 FKBP4Q02790 459 aaKnown RBP eCLIP23.23■■□□□ 1.31
PNN-202ENST00000553331 NLRP10Q86W26 655 aa23.23■■□□□ 1.31
PNN-202ENST00000553331 RTKN2Q8IZC4 609 aa23.23■■□□□ 1.31
PNN-202ENST00000553331 NLRP3Q96P20 1036 aa23.23■■□□□ 1.31
PNN-202ENST00000553331 VEGFAP15692 232 aaPredicted RBP23.22■■□□□ 1.31
PNN-202ENST00000553331 ANKRD13DQ6ZTN6 518 aa23.22■■□□□ 1.31
PNN-202ENST00000553331 HYPKQ9NX55 129 aa23.22■■□□□ 1.31
PNN-202ENST00000553331 TRMT112Q9UI30 125 aaKnown RBP23.22■■□□□ 1.31
PNN-202ENST00000553331 HCLS1P14317 486 aaPredicted RBP23.21■■□□□ 1.31
PNN-202ENST00000553331 SYNE4Q8N205 404 aa23.21■■□□□ 1.31
PNN-202ENST00000553331 PLBD2Q8NHP8 589 aa23.21■■□□□ 1.31
PNN-202ENST00000553331 RIC1Q4ADV7 1423 aa23.21■■□□□ 1.31
PNN-202ENST00000553331 HOXA10P31260 410 aaPredicted RBP23.2■■□□□ 1.3
PNN-202ENST00000553331 C8orf58Q8NAV2 365 aa23.2■■□□□ 1.3
PNN-202ENST00000553331 ATP5J2-PTCD1G3V325 749 aa23.19■■□□□ 1.3
PNN-202ENST00000553331 PPEF1O14829 653 aaPredicted RBP23.19■■□□□ 1.3
PNN-202ENST00000553331 DDNO94850 711 aaPredicted RBP23.19■■□□□ 1.3
PNN-202ENST00000553331 CRAMP1Q96RY5 1269 aa23.19■■□□□ 1.3
PNN-202ENST00000553331 SALL2Q9Y467 1007 aaPredicted RBP23.19■■□□□ 1.3
PNN-202ENST00000553331 SLC10A5Q5PT55 438 aa23.18■■□□□ 1.3
PNN-202ENST00000553331 SLC51AQ86UW1 340 aa23.18■■□□□ 1.3
PNN-202ENST00000553331 TSR2Q969E8 191 aaKnown RBP23.18■■□□□ 1.3
PNN-202ENST00000553331 LAMB2P55268 1798 aa23.18■■□□□ 1.3
PNN-202ENST00000553331 SH3TC1Q8TE82 1336 aa23.17■■□□□ 1.3
PNN-202ENST00000553331 IARSP41252 1262 aaKnown RBP23.17■■□□□ 1.3
PNN-202ENST00000553331 APLP1P51693 650 aa23.17■■□□□ 1.3
PNN-202ENST00000553331 FSTL1Q12841 308 aa23.17■■□□□ 1.3
PNN-202ENST00000553331 RIC3Q7Z5B4 369 aa23.17■■□□□ 1.3
PNN-202ENST00000553331 PHAXQ9H814 394 aaKnown RBP23.17■■□□□ 1.3
PNN-202ENST00000553331 WDR90Q96KV7 1748 aa23.16■■□□□ 1.3
PNN-202ENST00000553331 RNF123Q5XPI4 1314 aa23.16■■□□□ 1.3
PNN-202ENST00000553331 GOLGA2Q08379 1002 aa23.16■■□□□ 1.3
PNN-202ENST00000553331 WWC1Q8IX03 1113 aa23.16■■□□□ 1.3
PNN-202ENST00000553331 SMC1BQ8NDV3 1235 aa23.16■■□□□ 1.3
PNN-202ENST00000553331 POTECB2RU33 542 aa23.15■■□□□ 1.3
PNN-202ENST00000553331 RTL5Q5HYW3 569 aaPredicted RBP23.15■■□□□ 1.3
PNN-202ENST00000553331 CC2D2BQ6DHV5 1058 aa23.15■■□□□ 1.3
PNN-202ENST00000553331 TSPYL6Q8N831 410 aa23.15■■□□□ 1.3
PNN-202ENST00000553331 TMX4Q9H1E5 349 aaPredicted RBP23.15■■□□□ 1.3
PNN-202ENST00000553331 ABCC4O15439 1325 aa23.14■■□□□ 1.3
PNN-202ENST00000553331 CCDC30Q5VVM6 783 aa23.14■■□□□ 1.29
PNN-202ENST00000553331 FAM89AQ96GI7 184 aa23.14■■□□□ 1.29
PNN-202ENST00000553331 ISCA1Q9BUE6 129 aa23.14■■□□□ 1.29
PNN-202ENST00000553331 ZNF541Q9H0D2 1346 aa23.13■■□□□ 1.29
PNN-202ENST00000553331 CCDC27Q2M243 656 aa23.13■■□□□ 1.29
PNN-202ENST00000553331 DDX46Q7L014 1031 aaKnown RBP23.13■■□□□ 1.29
PNN-202ENST00000553331 PSMD1Q99460 953 aa23.13■■□□□ 1.29
PNN-202ENST00000553331 TAF1P21675 1872 aa23.12■■□□□ 1.29
PNN-202ENST00000553331 HTRA3P83110 453 aa23.12■■□□□ 1.29
PNN-202ENST00000553331 FAM9BQ8IZU0 186 aa23.12■■□□□ 1.29
PNN-202ENST00000553331 JDP2Q8WYK2 163 aa23.12■■□□□ 1.29
PNN-202ENST00000553331 MYD88Q99836 296 aa23.11■■□□□ 1.29
PNN-202ENST00000553331 DDX60Q8IY21 1712 aaKnown RBP23.11■■□□□ 1.29
PNN-202ENST00000553331 SNED1Q8TER0 1413 aa23.1■■□□□ 1.29
PNN-202ENST00000553331 ATP6V0A2Q9Y487 856 aa23.1■■□□□ 1.29
PNN-202ENST00000553331 GRIPAP1Q4V328 841 aa23.09■■□□□ 1.29
PNN-202ENST00000553331 LARGE2Q8N3Y3 721 aa23.09■■□□□ 1.29
PNN-202ENST00000553331 CHMP4AQ9BY43 222 aa23.09■■□□□ 1.29
PNN-202ENST00000553331 BBOX1O75936 387 aa23.08■■□□□ 1.29
PNN-202ENST00000553331 DDX58O95786 925 aaKnown RBP23.08■■□□□ 1.29
PNN-202ENST00000553331 TWISTNBQ3B726 338 aaPredicted RBP23.08■■□□□ 1.29
PNN-202ENST00000553331 STK31Q9BXU1 1019 aa23.08■■□□□ 1.29
PNN-202ENST00000553331 FZD9O00144 591 aa23.07■■□□□ 1.28
PNN-202ENST00000553331 IRS4O14654 1257 aaPredicted RBP23.07■■□□□ 1.28
PNN-202ENST00000553331 GRAPQ13588 217 aa23.07■■□□□ 1.28
PNN-202ENST00000553331 GRAPLQ8TC17 118 aaPredicted RBP23.07■■□□□ 1.28
PNN-202ENST00000553331 GJA3Q9Y6H8 435 aa23.07■■□□□ 1.28
PNN-202ENST00000553331 IQCA1LA6NCM1 817 aa23.06■■□□□ 1.28
PNN-202ENST00000553331 PPIP5K2O43314 1243 aa23.06■■□□□ 1.28
PNN-202ENST00000553331 POTEIP0CG38 1075 aa23.06■■□□□ 1.28
PNN-202ENST00000553331 POTEJP0CG39 1038 aa23.06■■□□□ 1.28
PNN-202ENST00000553331 EIF6P56537 245 aaKnown RBP23.06■■□□□ 1.28
PNN-202ENST00000553331 DPP8Q6V1X1 898 aaPredicted RBP23.06■■□□□ 1.28
PNN-202ENST00000553331 SP8Q8IXZ3 490 aa23.06■■□□□ 1.28
PNN-202ENST00000553331 JARID2Q92833 1246 aaPredicted RBP23.06■■□□□ 1.28
PNN-202ENST00000553331 COL4A5P29400 1685 aa23.06■■□□□ 1.28
PNN-202ENST00000553331 IL16Q14005 1332 aa23.06■■□□□ 1.28
PNN-202ENST00000553331 SCN4AP35499 1836 aa23.05■■□□□ 1.28
PNN-202ENST00000553331 TRIM28Q13263 835 aaKnown RBP23.05■■□□□ 1.28
PNN-202ENST00000553331 AOC3Q16853 763 aa23.05■■□□□ 1.28
PNN-202ENST00000553331 EAPPQ56P03 285 aaPredicted RBP23.05■■□□□ 1.28
PNN-202ENST00000553331 NIM1KQ8IY84 436 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms