RNA–Protein interactions for RNA: ENST00000553029.1

LINC02406-201, Transcript of long intergenic non-protein coding RNA 2406, humanhuman

TSL 3 BASIC

Gene LINC02406, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02406-201ENST00000553029 SEC24BO95487 1268 aa8.73□□□□□ -1.01
LINC02406-201ENST00000553029 IARSP41252 1262 aaKnown RBP8.73□□□□□ -1.01
LINC02406-201ENST00000553029 EPS15P42566 896 aa8.73□□□□□ -1.01
LINC02406-201ENST00000553029 EIF6P56537 245 aaKnown RBP8.73□□□□□ -1.01
LINC02406-201ENST00000553029 HUNKP57058 714 aa8.73□□□□□ -1.01
LINC02406-201ENST00000553029 HDAC9Q9UKV0 1011 aa8.73□□□□□ -1.01
LINC02406-201ENST00000553029 KIF24Q5T7B8 1368 aa8.73□□□□□ -1.01
LINC02406-201ENST00000553029 HSP90AB1P08238 724 aaKnown RBP8.72□□□□□ -1.01
LINC02406-201ENST00000553029 CABP4P57796 275 aa8.72□□□□□ -1.01
LINC02406-201ENST00000553029 KIF23Q02241 960 aaPredicted RBP8.72□□□□□ -1.01
LINC02406-201ENST00000553029 PDAP1Q13442 181 aaKnown RBP8.72□□□□□ -1.01
LINC02406-201ENST00000553029 PRR5LQ6MZQ0 368 aa8.72□□□□□ -1.01
LINC02406-201ENST00000553029 FBXO46Q6PJ61 603 aaPredicted RBP8.72□□□□□ -1.01
LINC02406-201ENST00000553029 SYNE4Q8N205 404 aa8.72□□□□□ -1.01
LINC02406-201ENST00000553029 CCDC24Q8N4L8 307 aa8.72□□□□□ -1.01
LINC02406-201ENST00000553029 PDCD7Q8N8D1 485 aaKnown RBP8.72□□□□□ -1.01
LINC02406-201ENST00000553029 JDP2Q8WYK2 163 aa8.72□□□□□ -1.01
LINC02406-201ENST00000553029 RNF25Q96BH1 459 aaPredicted RBP8.72□□□□□ -1.01
LINC02406-201ENST00000553029 MASTLQ96GX5 879 aa8.72□□□□□ -1.01
LINC02406-201ENST00000553029 GLIS2Q9BZE0 524 aaPredicted RBP8.72□□□□□ -1.01
LINC02406-201ENST00000553029 FAM155AB1AL88 458 aaPredicted RBP8.71□□□□□ -1.02
LINC02406-201ENST00000553029 SRGNP10124 158 aa8.71□□□□□ -1.02
LINC02406-201ENST00000553029 LCE2DQ5TA82 110 aaPredicted RBP8.71□□□□□ -1.02
LINC02406-201ENST00000553029 RGMBQ6NW40 437 aa8.71□□□□□ -1.02
LINC02406-201ENST00000553029 RTKN2Q8IZC4 609 aa8.71□□□□□ -1.02
LINC02406-201ENST00000553029 C7orf43Q8WVR3 580 aa8.71□□□□□ -1.02
LINC02406-201ENST00000553029 OCEL1Q9H607 264 aa8.71□□□□□ -1.02
LINC02406-201ENST00000553029 MYH14Q7Z406 1995 aaKnown RBP8.71□□□□□ -1.02
LINC02406-201ENST00000553029 RAB3GAP2Q9H2M9 1393 aa8.71□□□□□ -1.02
LINC02406-201ENST00000553029 NPHP1O15259 732 aa8.7□□□□□ -1.02
LINC02406-201ENST00000553029 PLCG2P16885 1265 aa8.7□□□□□ -1.02
LINC02406-201ENST00000553029 DNAJC10Q8IXB1 793 aa8.7□□□□□ -1.02
LINC02406-201ENST00000553029 CCDC102AQ96A19 550 aa8.7□□□□□ -1.02
LINC02406-201ENST00000553029 SCUBE2Q9NQ36 999 aa8.7□□□□□ -1.02
LINC02406-201ENST00000553029 ADARB2Q9NS39 739 aaKnown RBP8.7□□□□□ -1.02
LINC02406-201ENST00000553029 AFDNP55196 1824 aaKnown RBP8.7□□□□□ -1.02
LINC02406-201ENST00000553029 ROCK2O75116 1388 aaKnown RBP8.7□□□□□ -1.02
LINC02406-201ENST00000553029 ST5P78524 1137 aa8.69□□□□□ -1.02
LINC02406-201ENST00000553029 TBC1D9BQ66K14 1250 aa8.69□□□□□ -1.02
LINC02406-201ENST00000553029 CNBD1Q8NA66 436 aa8.69□□□□□ -1.02
LINC02406-201ENST00000553029 ZBTB1Q9Y2K1 713 aa8.69□□□□□ -1.02
LINC02406-201ENST00000553029 COL11A2P13942 1736 aaPredicted RBP8.68□□□□□ -1.02
LINC02406-201ENST00000553029 CDC37L1Q7L3B6 337 aa8.68□□□□□ -1.02
LINC02406-201ENST00000553029 ZNF296Q8WUU4 475 aaPredicted RBP8.68□□□□□ -1.02
LINC02406-201ENST00000553029 GGNBP2Q9H3C7 697 aa8.68□□□□□ -1.02
LINC02406-201ENST00000553029 COL6A3P12111 3177 aa8.68□□□□□ -1.02
LINC02406-201ENST00000553029 ZNF157P51786 506 aaPredicted RBP8.67□□□□□ -1.02
LINC02406-201ENST00000553029 WASHC2AQ641Q2 1341 aa8.67□□□□□ -1.02
LINC02406-201ENST00000553029 INTS3Q68E01 1043 aaKnown RBP8.67□□□□□ -1.02
LINC02406-201ENST00000553029 OLFM4Q6UX06 510 aa8.67□□□□□ -1.02
LINC02406-201ENST00000553029 CSRNP1Q96S65 589 aa8.67□□□□□ -1.02
LINC02406-201ENST00000553029 EYA1Q99502 592 aa8.67□□□□□ -1.02
LINC02406-201ENST00000553029 COL25A1Q9BXS0 654 aaPredicted RBP8.67□□□□□ -1.02
LINC02406-201ENST00000553029 GPRC5DQ9NZD1 345 aa8.67□□□□□ -1.02
LINC02406-201ENST00000553029 TJP1Q07157 1748 aa8.66□□□□□ -1.02
LINC02406-201ENST00000553029 SLC10A3P09131 477 aa8.66□□□□□ -1.02
LINC02406-201ENST00000553029 CYP19A1P11511 503 aaPredicted RBP8.66□□□□□ -1.02
LINC02406-201ENST00000553029 NPR1P16066 1061 aa8.66□□□□□ -1.02
LINC02406-201ENST00000553029 ZC3H15Q8WU90 426 aaKnown RBP8.66□□□□□ -1.02
LINC02406-201ENST00000553029 PSMD1Q99460 953 aa8.66□□□□□ -1.02
LINC02406-201ENST00000553029 GBA2Q9HCG7 927 aaPredicted RBP8.66□□□□□ -1.02
LINC02406-201ENST00000553029 PGAP2Q9UHJ9 254 aa8.66□□□□□ -1.02
LINC02406-201ENST00000553029 TRPM7Q96QT4 1865 aa8.66□□□□□ -1.02
LINC02406-201ENST00000553029 BCORQ6W2J9 1755 aa8.66□□□□□ -1.02
LINC02406-201ENST00000553029 A0A087WZG4 1122 aa8.65□□□□□ -1.02
LINC02406-201ENST00000553029 FYB1O15117 783 aa8.65□□□□□ -1.02
LINC02406-201ENST00000553029 C2orf69Q8N8R5 385 aa8.65□□□□□ -1.02
LINC02406-201ENST00000553029 NFATC2IPQ8NCF5 419 aa8.65□□□□□ -1.02
LINC02406-201ENST00000553029 PUS7Q96PZ0 661 aaKnown RBP8.65□□□□□ -1.02
LINC02406-201ENST00000553029 EMILIN1Q9Y6C2 1016 aa8.65□□□□□ -1.02
LINC02406-201ENST00000553029 SLX4Q8IY92 1834 aa8.65□□□□□ -1.02
LINC02406-201ENST00000553029 TRIOBPQ9H2D6 2365 aa8.65□□□□□ -1.02
LINC02406-201ENST00000553029 ANKRD31Q8N7Z5 1873 aa8.64□□□□□ -1.03
LINC02406-201ENST00000553029 ST20-MTHFSA0A0A6YYL1 179 aa8.64□□□□□ -1.03
LINC02406-201ENST00000553029 H0YGN5 161 aa8.64□□□□□ -1.03
LINC02406-201ENST00000553029 MTHFSP49914 203 aa8.64□□□□□ -1.03
LINC02406-201ENST00000553029 ZNF530Q6P9A1 599 aaPredicted RBP8.64□□□□□ -1.03
LINC02406-201ENST00000553029 LARGE2Q8N3Y3 721 aa8.64□□□□□ -1.03
LINC02406-201ENST00000553029 RBM27Q9P2N5 1060 aaKnown RBP8.64□□□□□ -1.03
LINC02406-201ENST00000553029 COL4A5P29400 1685 aa8.63□□□□□ -1.03
LINC02406-201ENST00000553029 GPR25O00155 361 aa8.63□□□□□ -1.03
LINC02406-201ENST00000553029 PPM1GO15355 546 aaPredicted RBP8.63□□□□□ -1.03
LINC02406-201ENST00000553029 TBC1D8O95759 1140 aa8.63□□□□□ -1.03
LINC02406-201ENST00000553029 CANXP27824 592 aaKnown RBP8.63□□□□□ -1.03
LINC02406-201ENST00000553029 PLEKHO1Q53GL0 409 aaPredicted RBP8.63□□□□□ -1.03
LINC02406-201ENST00000553029 NOM1Q5C9Z4 860 aaKnown RBP8.63□□□□□ -1.03
LINC02406-201ENST00000553029 NIM1KQ8IY84 436 aa8.63□□□□□ -1.03
LINC02406-201ENST00000553029 SETDB2Q96T68 719 aa8.63□□□□□ -1.03
LINC02406-201ENST00000553029 SCN11AQ9UI33 1791 aa8.63□□□□□ -1.03
LINC02406-201ENST00000553029 SNED1Q8TER0 1413 aa8.63□□□□□ -1.03
LINC02406-201ENST00000553029 CDHR2Q9BYE9 1310 aa8.62□□□□□ -1.03
LINC02406-201ENST00000553029 EN2P19622 333 aaPredicted RBP8.62□□□□□ -1.03
LINC02406-201ENST00000553029 EIF5P55010 431 aaKnown RBP8.62□□□□□ -1.03
LINC02406-201ENST00000553029 MKRN3Q13064 507 aaKnown RBP8.62□□□□□ -1.03
LINC02406-201ENST00000553029 USP48Q86UV5 1035 aa8.62□□□□□ -1.03
LINC02406-201ENST00000553029 MPNDQ8N594 471 aa8.62□□□□□ -1.03
LINC02406-201ENST00000553029 ARFGEF2Q9Y6D5 1785 aa8.61□□□□□ -1.03
LINC02406-201ENST00000553029 RANBP2P49792 3224 aaKnown RBP8.61□□□□□ -1.03
LINC02406-201ENST00000553029 BRCA2P51587 3418 aa8.61□□□□□ -1.03
LINC02406-201ENST00000553029 KLRG2A4D1S0 409 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms