RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 BIN1O00499 593 aa13.63□□□□□ -0.23
PPFIA2-227ENST00000552948 CCAR1Q8IX12 1150 aaKnown RBP13.63□□□□□ -0.23
PPFIA2-227ENST00000552948 HDAC5Q9UQL6 1122 aa13.63□□□□□ -0.23
PPFIA2-227ENST00000552948 AATKQ6ZMQ8 1374 aa13.63□□□□□ -0.23
PPFIA2-227ENST00000552948 USP32Q8NFA0 1604 aa13.62□□□□□ -0.23
PPFIA2-227ENST00000552948 CCDC69A6NI79 296 aa13.62□□□□□ -0.23
PPFIA2-227ENST00000552948 ISM2Q6H9L7 571 aa13.62□□□□□ -0.23
PPFIA2-227ENST00000552948 KRT222Q8N1A0 295 aa13.62□□□□□ -0.23
PPFIA2-227ENST00000552948 ZC3H13Q5T200 1668 aaKnown RBP13.62□□□□□ -0.23
PPFIA2-227ENST00000552948 ELF2Q15723 593 aa13.62□□□□□ -0.23
PPFIA2-227ENST00000552948 RIC3Q7Z5B4 369 aa13.62□□□□□ -0.23
PPFIA2-227ENST00000552948 ERC1Q8IUD2 1116 aa13.62□□□□□ -0.23
PPFIA2-227ENST00000552948 IL17REQ8NFR9 667 aa13.62□□□□□ -0.23
PPFIA2-227ENST00000552948 ZBTB9Q96C00 473 aa13.62□□□□□ -0.23
PPFIA2-227ENST00000552948 EDC3Q96F86 508 aaKnown RBP13.62□□□□□ -0.23
PPFIA2-227ENST00000552948 MAP3K2Q9Y2U5 619 aa13.62□□□□□ -0.23
PPFIA2-227ENST00000552948 CDK12Q9NYV4 1490 aaPredicted RBP13.62□□□□□ -0.23
PPFIA2-227ENST00000552948 MROH1Q8NDA8 1641 aa13.62□□□□□ -0.23
PPFIA2-227ENST00000552948 CCDC66A2RUB6 948 aa13.62□□□□□ -0.23
PPFIA2-227ENST00000552948 HIP1O00291 1037 aa13.62□□□□□ -0.23
PPFIA2-227ENST00000552948 MPRIPQ6WCQ1 1025 aa13.62□□□□□ -0.23
PPFIA2-227ENST00000552948 MNS1Q8NEH6 495 aa13.62□□□□□ -0.23
PPFIA2-227ENST00000552948 NDUFB9Q9Y6M9 179 aa13.62□□□□□ -0.23
PPFIA2-227ENST00000552948 AOX1Q06278 1338 aa13.61□□□□□ -0.23
PPFIA2-227ENST00000552948 PRR36Q9H6K5 1346 aa13.61□□□□□ -0.23
PPFIA2-227ENST00000552948 SLC27A2O14975 620 aa13.61□□□□□ -0.23
PPFIA2-227ENST00000552948 TPM4P67936 248 aa13.61□□□□□ -0.23
PPFIA2-227ENST00000552948 KLHDC4Q8TBB5 520 aa13.61□□□□□ -0.23
PPFIA2-227ENST00000552948 ZSWIM6Q9HCJ5 1215 aa13.61□□□□□ -0.23
PPFIA2-227ENST00000552948 BTBD11A6QL63 1104 aa13.61□□□□□ -0.23
PPFIA2-227ENST00000552948 CEP57L1Q8IYX8 460 aa13.61□□□□□ -0.23
PPFIA2-227ENST00000552948 CLSTN2Q9H4D0 955 aa13.61□□□□□ -0.23
PPFIA2-227ENST00000552948 SALL3Q9BXA9 1300 aa13.61□□□□□ -0.23
PPFIA2-227ENST00000552948 AOPEPQ8N6M6 819 aa13.61□□□□□ -0.23
PPFIA2-227ENST00000552948 NEUROD6Q96NK8 337 aa13.61□□□□□ -0.23
PPFIA2-227ENST00000552948 REREQ9P2R6 1566 aa13.6□□□□□ -0.23
PPFIA2-227ENST00000552948 POLR3GO15318 223 aaPredicted RBP13.6□□□□□ -0.23
PPFIA2-227ENST00000552948 CYB5RLQ6IPT4 315 aa13.6□□□□□ -0.23
PPFIA2-227ENST00000552948 FSIP1Q8NA03 581 aa13.6□□□□□ -0.23
PPFIA2-227ENST00000552948 CHMP4AQ9BY43 222 aa13.6□□□□□ -0.23
PPFIA2-227ENST00000552948 ZNF530Q6P9A1 599 aaPredicted RBP13.6□□□□□ -0.23
PPFIA2-227ENST00000552948 FUCA2Q9BTY2 467 aa13.6□□□□□ -0.23
PPFIA2-227ENST00000552948 NAT10Q9H0A0 1025 aaKnown RBP13.6□□□□□ -0.23
PPFIA2-227ENST00000552948 METP08581 1390 aa13.6□□□□□ -0.23
PPFIA2-227ENST00000552948 NEXMIFQ5QGS0 1516 aa13.59□□□□□ -0.23
PPFIA2-227ENST00000552948 MYL6BP14649 208 aa13.59□□□□□ -0.23
PPFIA2-227ENST00000552948 CCDC144BQ3MJ40 725 aa13.59□□□□□ -0.23
PPFIA2-227ENST00000552948 C1orf141Q5JVX7 400 aa13.59□□□□□ -0.23
PPFIA2-227ENST00000552948 CCDC144CPQ8IYA2 1237 aa13.59□□□□□ -0.23
PPFIA2-227ENST00000552948 KCNQ3O43525 872 aa13.59□□□□□ -0.23
PPFIA2-227ENST00000552948 FAM69CQ0P6D2 419 aa13.59□□□□□ -0.23
PPFIA2-227ENST00000552948 TMC6Q7Z403 805 aa13.59□□□□□ -0.23
PPFIA2-227ENST00000552948 GTF3C6Q969F1 213 aa13.59□□□□□ -0.23
PPFIA2-227ENST00000552948 TMX1Q9H3N1 280 aa13.59□□□□□ -0.23
PPFIA2-227ENST00000552948 TTC41PQ6P2S7 1318 aa13.59□□□□□ -0.23
PPFIA2-227ENST00000552948 ARHGAP31Q2M1Z3 1444 aa13.59□□□□□ -0.23
PPFIA2-227ENST00000552948 ATP7BP35670 1465 aa13.59□□□□□ -0.23
PPFIA2-227ENST00000552948 ARAP3Q8WWN8 1544 aa13.59□□□□□ -0.23
PPFIA2-227ENST00000552948 STX1AQ16623 288 aa13.59□□□□□ -0.23
PPFIA2-227ENST00000552948 Q6ZUG5 572 aa13.59□□□□□ -0.23
PPFIA2-227ENST00000552948 NEK1Q96PY6 1258 aa13.59□□□□□ -0.23
PPFIA2-227ENST00000552948 FTOQ9C0B1 505 aaKnown RBP eCLIP13.59□□□□□ -0.23
PPFIA2-227ENST00000552948 LMTK2Q8IWU2 1503 aa13.59□□□□□ -0.23
PPFIA2-227ENST00000552948 A0A0D9SFI3 127 aa13.58□□□□□ -0.23
PPFIA2-227ENST00000552948 NEXNQ0ZGT2 675 aa13.58□□□□□ -0.23
PPFIA2-227ENST00000552948 SNW1Q13573 536 aaKnown RBP13.58□□□□□ -0.23
PPFIA2-227ENST00000552948 STK38Q15208 465 aa13.58□□□□□ -0.23
PPFIA2-227ENST00000552948 ZNF397Q8NF99 534 aaPredicted RBP13.58□□□□□ -0.23
PPFIA2-227ENST00000552948 ANO10Q9NW15 660 aa13.58□□□□□ -0.23
PPFIA2-227ENST00000552948 YEATS2Q9ULM3 1422 aa13.58□□□□□ -0.23
PPFIA2-227ENST00000552948 USP27XA6NNY8 438 aa13.58□□□□□ -0.24
PPFIA2-227ENST00000552948 OSCARQ8IYS5 282 aa13.58□□□□□ -0.24
PPFIA2-227ENST00000552948 LGR6Q9HBX8 967 aa13.58□□□□□ -0.24
PPFIA2-227ENST00000552948 VGLL3A8MV65 326 aa13.58□□□□□ -0.24
PPFIA2-227ENST00000552948 PPLO60437 1756 aa13.58□□□□□ -0.24
PPFIA2-227ENST00000552948 CCDC129Q6ZRS4 1044 aa13.58□□□□□ -0.24
PPFIA2-227ENST00000552948 ARHGEF28Q8N1W1 1705 aaKnown RBP13.58□□□□□ -0.24
PPFIA2-227ENST00000552948 NEURL4Q96JN8 1562 aa13.58□□□□□ -0.24
PPFIA2-227ENST00000552948 SFPQP23246 707 aaKnown RBP eCLIP13.57□□□□□ -0.24
PPFIA2-227ENST00000552948 TNNT3P45378 269 aaPredicted RBP13.57□□□□□ -0.24
PPFIA2-227ENST00000552948 SYT10Q6XYQ8 523 aa13.57□□□□□ -0.24
PPFIA2-227ENST00000552948 SLU7O95391 586 aaKnown RBP13.57□□□□□ -0.24
PPFIA2-227ENST00000552948 RPS6KB1P23443 525 aa13.57□□□□□ -0.24
PPFIA2-227ENST00000552948 CHST3Q7LGC8 479 aa13.57□□□□□ -0.24
PPFIA2-227ENST00000552948 RAB11FIP4Q86YS3 637 aa13.57□□□□□ -0.24
PPFIA2-227ENST00000552948 ANKRD7Q92527 254 aa13.57□□□□□ -0.24
PPFIA2-227ENST00000552948 KIDINS220Q9ULH0 1771 aa13.57□□□□□ -0.24
PPFIA2-227ENST00000552948 ZBTB22O15209 634 aa13.57□□□□□ -0.24
PPFIA2-227ENST00000552948 EPB41L2O43491 1005 aaKnown RBP13.57□□□□□ -0.24
PPFIA2-227ENST00000552948 DDX58O95786 925 aaKnown RBP13.57□□□□□ -0.24
PPFIA2-227ENST00000552948 C11orf57Q6ZUT1 292 aaPredicted RBP13.57□□□□□ -0.24
PPFIA2-227ENST00000552948 LRRC8AQ8IWT6 810 aa13.57□□□□□ -0.24
PPFIA2-227ENST00000552948 TM6SF1Q9BZW5 370 aa13.57□□□□□ -0.24
PPFIA2-227ENST00000552948 CTNNA3Q9UI47 895 aa13.57□□□□□ -0.24
PPFIA2-227ENST00000552948 URI1O94763 535 aaPredicted RBP13.56□□□□□ -0.24
PPFIA2-227ENST00000552948 UBXN4Q92575 508 aa13.56□□□□□ -0.24
PPFIA2-227ENST00000552948 ZNF396Q96N95 335 aaPredicted RBP13.56□□□□□ -0.24
PPFIA2-227ENST00000552948 POLR3DP05423 398 aaPredicted RBP13.56□□□□□ -0.24
PPFIA2-227ENST00000552948 PDILTQ8N807 584 aa13.56□□□□□ -0.24
PPFIA2-227ENST00000552948 STK11IPQ8N1F8 1099 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms