RNA–Protein interactions for RNA: ENST00000552624.5

SYT1-211, Transcript of synaptotagmin 1, humanhuman

TSL 5

Gene SYT1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-211ENST00000552624 PCDH11YQ9BZA8 1340 aa11.04□□□□□ -0.64
SYT1-211ENST00000552624 CYP27B1O15528 508 aa11.03□□□□□ -0.64
SYT1-211ENST00000552624 MS4A1P11836 297 aa11.03□□□□□ -0.64
SYT1-211ENST00000552624 HMGB2P26583 209 aaKnown RBP11.03□□□□□ -0.64
SYT1-211ENST00000552624 SULF1Q8IWU6 871 aa11.03□□□□□ -0.64
SYT1-211ENST00000552624 PIGBQ92521 554 aa11.03□□□□□ -0.64
SYT1-211ENST00000552624 SMARCC1Q92922 1105 aaPredicted RBP11.03□□□□□ -0.64
SYT1-211ENST00000552624 DDRGK1Q96HY6 314 aa11.03□□□□□ -0.64
SYT1-211ENST00000552624 CGNL1Q0VF96 1302 aa11.03□□□□□ -0.64
SYT1-211ENST00000552624 MAP2P11137 1827 aaKnown RBP11.02□□□□□ -0.64
SYT1-211ENST00000552624 SWT1Q5T5J6 900 aaKnown RBP11.02□□□□□ -0.65
SYT1-211ENST00000552624 C9orf131Q5VYM1 1079 aa11.02□□□□□ -0.65
SYT1-211ENST00000552624 SIN3AQ96ST3 1273 aa11.02□□□□□ -0.65
SYT1-211ENST00000552624 KCPQ6ZWJ8 1503 aa11.02□□□□□ -0.65
SYT1-211ENST00000552624 RTL1A6NKG5 1358 aa11.02□□□□□ -0.65
SYT1-211ENST00000552624 LOC102724428A0A0B4J2F2 783 aa11.01□□□□□ -0.65
SYT1-211ENST00000552624 DPEP1P16444 411 aa11.01□□□□□ -0.65
SYT1-211ENST00000552624 SLC4A3P48751 1232 aa11.01□□□□□ -0.65
SYT1-211ENST00000552624 SIK1P57059 783 aa11.01□□□□□ -0.65
SYT1-211ENST00000552624 TGFB2P61812 414 aa11.01□□□□□ -0.65
SYT1-211ENST00000552624 FSTL1Q12841 308 aa11.01□□□□□ -0.65
SYT1-211ENST00000552624 ITPK1Q13572 414 aa11.01□□□□□ -0.65
SYT1-211ENST00000552624 ZFRQ96KR1 1074 aaKnown RBP11.01□□□□□ -0.65
SYT1-211ENST00000552624 FAM117AQ9C073 453 aa11.01□□□□□ -0.65
SYT1-211ENST00000552624 C10orf71Q711Q0 1435 aa11.01□□□□□ -0.65
SYT1-211ENST00000552624 BRCA1P38398 1863 aaKnown RBP11□□□□□ -0.65
SYT1-211ENST00000552624 GOLGA8CPA6NN73 597 aa11□□□□□ -0.65
SYT1-211ENST00000552624 NEUROD1Q13562 356 aa11□□□□□ -0.65
SYT1-211ENST00000552624 IL27Q8NEV9 243 aa11□□□□□ -0.65
SYT1-211ENST00000552624 PKD1L3Q7Z443 1732 aa11□□□□□ -0.65
SYT1-211ENST00000552624 SMG6Q86US8 1419 aaKnown RBP11□□□□□ -0.65
SYT1-211ENST00000552624 DDX11L8A8MPP1 907 aa10.99□□□□□ -0.65
SYT1-211ENST00000552624 HSPA1AP0DMV8 641 aaKnown RBP10.99□□□□□ -0.65
SYT1-211ENST00000552624 HSPA1BP0DMV9 641 aaKnown RBP10.99□□□□□ -0.65
SYT1-211ENST00000552624 HSP90AB2PQ58FF8 381 aa10.99□□□□□ -0.65
SYT1-211ENST00000552624 SAMD7Q7Z3H4 446 aa10.99□□□□□ -0.65
SYT1-211ENST00000552624 CARD11Q9BXL7 1154 aa10.99□□□□□ -0.65
SYT1-211ENST00000552624 RRAGCQ9HB90 399 aa10.99□□□□□ -0.65
SYT1-211ENST00000552624 ASAP1Q9ULH1 1129 aa10.99□□□□□ -0.65
SYT1-211ENST00000552624 PLEKHG2Q9H7P9 1386 aa10.99□□□□□ -0.65
SYT1-211ENST00000552624 ATP6V1AP38606 617 aa10.98□□□□□ -0.65
SYT1-211ENST00000552624 RNF181Q9P0P0 153 aa10.98□□□□□ -0.65
SYT1-211ENST00000552624 ARFGEF1Q9Y6D6 1849 aa10.98□□□□□ -0.65
SYT1-211ENST00000552624 KCNA3P22001 575 aa10.97□□□□□ -0.65
SYT1-211ENST00000552624 TMF1P82094 1093 aa10.97□□□□□ -0.65
SYT1-211ENST00000552624 SLF2Q8IX21 1173 aa10.97□□□□□ -0.65
SYT1-211ENST00000552624 BEGAINQ9BUH8 593 aa10.97□□□□□ -0.65
SYT1-211ENST00000552624 GGNBP2Q9H3C7 697 aa10.97□□□□□ -0.65
SYT1-211ENST00000552624 CCDC87Q9NVE4 849 aa10.97□□□□□ -0.65
SYT1-211ENST00000552624 KDM2BQ8NHM5 1336 aa10.97□□□□□ -0.65
SYT1-211ENST00000552624 C4AP0C0L4 1744 aa10.97□□□□□ -0.65
SYT1-211ENST00000552624 TNRC6CQ9HCJ0 1690 aaKnown RBP10.96□□□□□ -0.65
SYT1-211ENST00000552624 INSRP06213 1382 aa10.96□□□□□ -0.65
SYT1-211ENST00000552624 CD46P15529 392 aa10.96□□□□□ -0.65
SYT1-211ENST00000552624 RDH13Q8NBN7 331 aa10.96□□□□□ -0.65
SYT1-211ENST00000552624 ANKK1Q8NFD2 765 aa10.96□□□□□ -0.65
SYT1-211ENST00000552624 LRCH3Q96II8 777 aa10.96□□□□□ -0.65
SYT1-211ENST00000552624 TMOD3Q9NYL9 352 aa10.96□□□□□ -0.65
SYT1-211ENST00000552624 GYS1P13807 737 aa10.95□□□□□ -0.66
SYT1-211ENST00000552624 TRAPPC3LQ5T215 181 aa10.95□□□□□ -0.66
SYT1-211ENST00000552624 NLGN1Q8N2Q7 840 aa10.95□□□□□ -0.66
SYT1-211ENST00000552624 SMC1BQ8NDV3 1235 aa10.95□□□□□ -0.66
SYT1-211ENST00000552624 PUS7Q96PZ0 661 aaKnown RBP10.95□□□□□ -0.66
SYT1-211ENST00000552624 RTCBQ9Y3I0 505 aaKnown RBP10.95□□□□□ -0.66
SYT1-211ENST00000552624 SBF1O95248 1867 aa10.94□□□□□ -0.66
SYT1-211ENST00000552624 FYB1O15117 783 aa10.94□□□□□ -0.66
SYT1-211ENST00000552624 RNF40O75150 1001 aa10.94□□□□□ -0.66
SYT1-211ENST00000552624 DCAF5Q96JK2 942 aa10.94□□□□□ -0.66
SYT1-211ENST00000552624 ATG3Q9NT62 314 aa10.94□□□□□ -0.66
SYT1-211ENST00000552624 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.94□□□□□ -0.66
SYT1-211ENST00000552624 PIM2Q9P1W9 311 aa10.94□□□□□ -0.66
SYT1-211ENST00000552624 PARP3Q9Y6F1 533 aa10.94□□□□□ -0.66
SYT1-211ENST00000552624 FLT4P35916 1363 aa10.93□□□□□ -0.66
SYT1-211ENST00000552624 SLC4A9Q96Q91 983 aa10.93□□□□□ -0.66
SYT1-211ENST00000552624 KDRP35968 1356 aa10.92□□□□□ -0.66
SYT1-211ENST00000552624 CHRNA5P30532 468 aa10.92□□□□□ -0.66
SYT1-211ENST00000552624 RFC4P35249 363 aa10.92□□□□□ -0.66
SYT1-211ENST00000552624 RASSF7Q02833 373 aa10.92□□□□□ -0.66
SYT1-211ENST00000552624 DALRD3Q5D0E6 543 aaKnown RBP10.92□□□□□ -0.66
SYT1-211ENST00000552624 NECTIN2Q92692 538 aa10.92□□□□□ -0.66
SYT1-211ENST00000552624 WNT2BQ93097 391 aa10.92□□□□□ -0.66
SYT1-211ENST00000552624 PCDH10Q9P2E7 1040 aa10.92□□□□□ -0.66
SYT1-211ENST00000552624 SPG7Q9UQ90 795 aa10.92□□□□□ -0.66
SYT1-211ENST00000552624 EMILIN1Q9Y6C2 1016 aa10.92□□□□□ -0.66
SYT1-211ENST00000552624 TESK2Q96S53 571 aa10.91□□□□□ -0.66
SYT1-211ENST00000552624 NCAPD2Q15021 1401 aa10.91□□□□□ -0.66
SYT1-211ENST00000552624 MYH14Q7Z406 1995 aaKnown RBP10.9□□□□□ -0.66
SYT1-211ENST00000552624 COL5A3P25940 1745 aaPredicted RBP10.9□□□□□ -0.66
SYT1-211ENST00000552624 SOWAHBA6NEL2 793 aa10.9□□□□□ -0.66
SYT1-211ENST00000552624 SLC10A3P09131 477 aa10.9□□□□□ -0.66
SYT1-211ENST00000552624 PHKG2P15735 406 aa10.9□□□□□ -0.66
SYT1-211ENST00000552624 DIXDC1Q155Q3 683 aa10.9□□□□□ -0.66
SYT1-211ENST00000552624 RSPH6AQ9H0K4 717 aa10.9□□□□□ -0.66
SYT1-211ENST00000552624 SRP68Q9UHB9 627 aaKnown RBP10.9□□□□□ -0.66
SYT1-211ENST00000552624 KIF20BQ96Q89 1820 aa10.9□□□□□ -0.66
SYT1-211ENST00000552624 ST20-MTHFSA0A0A6YYL1 179 aa10.89□□□□□ -0.67
SYT1-211ENST00000552624 PPM1GO15355 546 aaPredicted RBP10.89□□□□□ -0.67
SYT1-211ENST00000552624 RPS6KA4O75676 772 aa10.89□□□□□ -0.67
SYT1-211ENST00000552624 DDR1Q08345 913 aa10.89□□□□□ -0.67
SYT1-211ENST00000552624 RC3H1Q5TC82 1133 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms