RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 CD163L1Q9NR16 1453 aa11.99□□□□□ -0.49
PRIM1-208ENST00000552590 MON2Q7Z3U7 1717 aa11.99□□□□□ -0.49
PRIM1-208ENST00000552590 COL6A3P12111 3177 aa11.99□□□□□ -0.49
PRIM1-208ENST00000552590 HOXC9P31274 260 aa11.99□□□□□ -0.49
PRIM1-208ENST00000552590 BCAMP50895 628 aa11.99□□□□□ -0.49
PRIM1-208ENST00000552590 FXR1P51114 621 aaKnown RBP eCLIP11.99□□□□□ -0.49
PRIM1-208ENST00000552590 ZNF787Q6DD87 383 aa11.99□□□□□ -0.49
PRIM1-208ENST00000552590 NBPF15Q8N660 670 aa11.99□□□□□ -0.49
PRIM1-208ENST00000552590 SCN4AP35499 1836 aa11.99□□□□□ -0.49
PRIM1-208ENST00000552590 TRIOBPQ9H2D6 2365 aa11.98□□□□□ -0.49
PRIM1-208ENST00000552590 POLRMTO00411 1230 aaKnown RBP11.98□□□□□ -0.49
PRIM1-208ENST00000552590 NRG2O14511 850 aaPredicted RBP11.98□□□□□ -0.49
PRIM1-208ENST00000552590 CA12O43570 354 aa11.98□□□□□ -0.49
PRIM1-208ENST00000552590 FMR1Q06787 632 aaKnown RBP eCLIP11.98□□□□□ -0.49
PRIM1-208ENST00000552590 SBNO2Q9Y2G9 1366 aa11.98□□□□□ -0.49
PRIM1-208ENST00000552590 SOWAHBA6NEL2 793 aa11.97□□□□□ -0.49
PRIM1-208ENST00000552590 RPS6KA4O75676 772 aa11.97□□□□□ -0.49
PRIM1-208ENST00000552590 FBLN1P23142 703 aa11.97□□□□□ -0.49
PRIM1-208ENST00000552590 MAP2K2P36507 400 aa11.97□□□□□ -0.49
PRIM1-208ENST00000552590 SLC4A9Q96Q91 983 aa11.97□□□□□ -0.49
PRIM1-208ENST00000552590 DDX21Q9NR30 783 aaKnown RBP eCLIP11.97□□□□□ -0.49
PRIM1-208ENST00000552590 MYH14Q7Z406 1995 aaKnown RBP11.97□□□□□ -0.49
PRIM1-208ENST00000552590 MAP3K19Q56UN5 1328 aa11.97□□□□□ -0.49
PRIM1-208ENST00000552590 CEP290O15078 2479 aa11.97□□□□□ -0.49
PRIM1-208ENST00000552590 AMPHP49418 695 aa11.96□□□□□ -0.49
PRIM1-208ENST00000552590 RC3H1Q5TC82 1133 aaKnown RBP11.96□□□□□ -0.49
PRIM1-208ENST00000552590 ATG3Q9NT62 314 aa11.96□□□□□ -0.49
PRIM1-208ENST00000552590 TMOD3Q9NYL9 352 aa11.96□□□□□ -0.49
PRIM1-208ENST00000552590 RABGEF1Q9UJ41 708 aa11.96□□□□□ -0.49
PRIM1-208ENST00000552590 ADAMTSL1Q8N6G6 1762 aa11.96□□□□□ -0.5
PRIM1-208ENST00000552590 ZDHHC16Q969W1 377 aa11.95□□□□□ -0.5
PRIM1-208ENST00000552590 ADAM33Q9BZ11 813 aa11.95□□□□□ -0.5
PRIM1-208ENST00000552590 DLEC1Q9Y238 1755 aa11.95□□□□□ -0.5
PRIM1-208ENST00000552590 C21orf2O43822 256 aa11.95□□□□□ -0.5
PRIM1-208ENST00000552590 TM4SF1P30408 202 aa11.95□□□□□ -0.5
PRIM1-208ENST00000552590 EPHX2P34913 555 aa11.95□□□□□ -0.5
PRIM1-208ENST00000552590 C2CD5Q86YS7 1000 aa11.95□□□□□ -0.5
PRIM1-208ENST00000552590 ZNF775Q96BV0 537 aaPredicted RBP11.95□□□□□ -0.5
PRIM1-208ENST00000552590 FER1L6Q2WGJ9 1857 aa11.94□□□□□ -0.5
PRIM1-208ENST00000552590 HACL1Q9UJ83 578 aa11.94□□□□□ -0.5
PRIM1-208ENST00000552590 CNTNAP4Q9C0A0 1308 aa11.94□□□□□ -0.5
PRIM1-208ENST00000552590 USP42Q9H9J4 1324 aaKnown RBP11.94□□□□□ -0.5
PRIM1-208ENST00000552590 KDRP35968 1356 aa11.93□□□□□ -0.5
PRIM1-208ENST00000552590 SLC17A8Q8NDX2 589 aa11.93□□□□□ -0.5
PRIM1-208ENST00000552590 AFDNP55196 1824 aaKnown RBP11.93□□□□□ -0.5
PRIM1-208ENST00000552590 BRPF1P55201 1214 aaPredicted RBP11.92□□□□□ -0.5
PRIM1-208ENST00000552590 NKX1-1Q15270 411 aaPredicted RBP11.92□□□□□ -0.5
PRIM1-208ENST00000552590 CST9Q5W186 159 aa11.92□□□□□ -0.5
PRIM1-208ENST00000552590 CIAPIN1Q6FI81 312 aa11.92□□□□□ -0.5
PRIM1-208ENST00000552590 TAOK3Q9H2K8 898 aa11.92□□□□□ -0.5
PRIM1-208ENST00000552590 COL5A3P25940 1745 aaPredicted RBP11.92□□□□□ -0.5
PRIM1-208ENST00000552590 H0YIN7 160 aa11.91□□□□□ -0.5
PRIM1-208ENST00000552590 RGL2O15211 777 aa11.91□□□□□ -0.5
PRIM1-208ENST00000552590 PNMA8AQ86V59 439 aaPredicted RBP11.91□□□□□ -0.5
PRIM1-208ENST00000552590 LAPTM4BQ86VI4 370 aa11.91□□□□□ -0.5
PRIM1-208ENST00000552590 TLL2Q9Y6L7 1015 aa11.91□□□□□ -0.5
PRIM1-208ENST00000552590 SMG6Q86US8 1419 aaKnown RBP11.91□□□□□ -0.5
PRIM1-208ENST00000552590 RANBP2P49792 3224 aaKnown RBP11.9□□□□□ -0.51
PRIM1-208ENST00000552590 RNF123Q5XPI4 1314 aa11.89□□□□□ -0.51
PRIM1-208ENST00000552590 ZNF541Q9H0D2 1346 aa11.89□□□□□ -0.51
PRIM1-208ENST00000552590 LTBP3Q9NS15 1303 aa11.89□□□□□ -0.51
PRIM1-208ENST00000552590 TRAF5O00463 557 aa11.89□□□□□ -0.51
PRIM1-208ENST00000552590 ZNF622Q969S3 477 aaKnown RBP eCLIP11.89□□□□□ -0.513e-6■■□□□ 11.7
PRIM1-208ENST00000552590 TRPM7Q96QT4 1865 aa11.89□□□□□ -0.51
PRIM1-208ENST00000552590 BRCA2P51587 3418 aa11.89□□□□□ -0.51
PRIM1-208ENST00000552590 ADAMTS7Q9UKP4 1686 aa11.89□□□□□ -0.51
PRIM1-208ENST00000552590 PPP1R3GB7ZBB8 358 aa11.89□□□□□ -0.51
PRIM1-208ENST00000552590 ZIC5Q96T25 663 aa11.89□□□□□ -0.51
PRIM1-208ENST00000552590 CARMIL3Q8ND23 1372 aa11.88□□□□□ -0.51
PRIM1-208ENST00000552590 NFIXQ14938 502 aa11.88□□□□□ -0.51
PRIM1-208ENST00000552590 PROX2Q3B8N5 592 aa11.88□□□□□ -0.51
PRIM1-208ENST00000552590 USPL1Q5W0Q7 1092 aa11.88□□□□□ -0.51
PRIM1-208ENST00000552590 EDC4Q6P2E9 1401 aaKnown RBP11.87□□□□□ -0.51
PRIM1-208ENST00000552590 SERPINB2P05120 415 aa11.87□□□□□ -0.51
PRIM1-208ENST00000552590 CRKLP46109 303 aaKnown RBP11.87□□□□□ -0.51
PRIM1-208ENST00000552590 RRS1Q15050 365 aaKnown RBP11.87□□□□□ -0.51
PRIM1-208ENST00000552590 TMC1Q8TDI8 760 aa11.87□□□□□ -0.51
PRIM1-208ENST00000552590 ZFRQ96KR1 1074 aaKnown RBP11.87□□□□□ -0.51
PRIM1-208ENST00000552590 PRKD2Q9BZL6 878 aa11.87□□□□□ -0.51
PRIM1-208ENST00000552590 HPS5Q9UPZ3 1129 aa11.87□□□□□ -0.51
PRIM1-208ENST00000552590 HDGFL2Q7Z4V5 671 aaPredicted RBP11.86□□□□□ -0.51
PRIM1-208ENST00000552590 SAPCD2Q86UD0 394 aa11.86□□□□□ -0.51
PRIM1-208ENST00000552590 NRXN2Q9P2S2 1712 aa11.86□□□□□ -0.51
PRIM1-208ENST00000552590 ZNF831Q5JPB2 1677 aa11.86□□□□□ -0.51
PRIM1-208ENST00000552590 ZPR1O75312 459 aa11.85□□□□□ -0.51
PRIM1-208ENST00000552590 CENPFP49454 3210 aa11.84□□□□□ -0.51
PRIM1-208ENST00000552590 COG3Q96JB2 828 aa11.84□□□□□ -0.51
PRIM1-208ENST00000552590 SLC12A5Q9H2X9 1139 aa11.84□□□□□ -0.51
PRIM1-208ENST00000552590 SPG7Q9UQ90 795 aa11.84□□□□□ -0.51
PRIM1-208ENST00000552590 RTL1A6NKG5 1358 aa11.84□□□□□ -0.51
PRIM1-208ENST00000552590 HSP90AB2PQ58FF8 381 aa11.83□□□□□ -0.52
PRIM1-208ENST00000552590 BICDL1Q6ZP65 573 aa11.83□□□□□ -0.52
PRIM1-208ENST00000552590 CTU1Q7Z7A3 348 aaKnown RBP11.83□□□□□ -0.52
PRIM1-208ENST00000552590 SLX4Q8IY92 1834 aa11.83□□□□□ -0.52
PRIM1-208ENST00000552590 UNC80Q8N2C7 3258 aa11.83□□□□□ -0.52
PRIM1-208ENST00000552590 PITPNM2Q9BZ72 1349 aa11.82□□□□□ -0.52
PRIM1-208ENST00000552590 EVI5O60447 810 aa11.82□□□□□ -0.52
PRIM1-208ENST00000552590 PTCD1O75127 700 aaKnown RBP11.82□□□□□ -0.52
PRIM1-208ENST00000552590 CELF2O95319 508 aaKnown RBP11.82□□□□□ -0.52
PRIM1-208ENST00000552590 PHKG2P15735 406 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms