RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	NUDT16	Q96DE0	195 aa	Known RBP	9.36	□□□□□ -0.91
CNOT2-238	ENST00000552422	TNS3	Q68CZ2	1445 aa		9.36	□□□□□ -0.91
CNOT2-238	ENST00000552422	PPIP5K1	Q6PFW1	1433 aa		9.36	□□□□□ -0.91
CNOT2-238	ENST00000552422	SPATA31A6	Q5VVP1	1343 aa		9.35	□□□□□ -0.91
CNOT2-238	ENST00000552422	NR3C2	P08235	984 aa		9.35	□□□□□ -0.91
CNOT2-238	ENST00000552422	GRM5	P41594	1212 aa		9.35	□□□□□ -0.91
CNOT2-238	ENST00000552422	SRPK2	P78362	688 aa	Known RBP	9.35	□□□□□ -0.91
CNOT2-238	ENST00000552422	ERFE	Q4G0M1	354 aa		9.35	□□□□□ -0.91
CNOT2-238	ENST00000552422	TRIM46	Q7Z4K8	759 aa		9.35	□□□□□ -0.91
CNOT2-238	ENST00000552422	ZBTB33	Q86T24	672 aa		9.35	□□□□□ -0.91
CNOT2-238	ENST00000552422	TESK2	Q96S53	571 aa		9.35	□□□□□ -0.91
CNOT2-238	ENST00000552422	MAP4K5	Q9Y4K4	846 aa		9.35	□□□□□ -0.91
CNOT2-238	ENST00000552422	PIK3C2A	O00443	1686 aa		9.35	□□□□□ -0.91
CNOT2-238	ENST00000552422	USP54	Q70EL1	1684 aa		9.35	□□□□□ -0.91
CNOT2-238	ENST00000552422	SBNO1	A3KN83	1393 aa		9.35	□□□□□ -0.91
CNOT2-238	ENST00000552422	ATAD2	Q6PL18	1390 aa		9.35	□□□□□ -0.91
CNOT2-238	ENST00000552422	ST20-MTHFS	A0A0A6YYL1	179 aa		9.34	□□□□□ -0.91
CNOT2-238	ENST00000552422	ZIC2	O95409	532 aa	Predicted RBP	9.34	□□□□□ -0.91
CNOT2-238	ENST00000552422	XPC	Q01831	940 aa	Predicted RBP	9.34	□□□□□ -0.91
CNOT2-238	ENST00000552422	PTK2	Q05397	1052 aa		9.34	□□□□□ -0.91
CNOT2-238	ENST00000552422	PMFBP1	Q8TBY8	1022 aa		9.34	□□□□□ -0.91
CNOT2-238	ENST00000552422	PLCH1	Q4KWH8	1693 aa		9.33	□□□□□ -0.92
CNOT2-238	ENST00000552422	ITPKC	Q96DU7	683 aa		9.33	□□□□□ -0.92
CNOT2-238	ENST00000552422	SLC10A4	Q96EP9	437 aa		9.33	□□□□□ -0.92
CNOT2-238	ENST00000552422	KLF16	Q9BXK1	252 aa	Predicted RBP	9.33	□□□□□ -0.92
CNOT2-238	ENST00000552422	DISP3	Q9P2K9	1392 aa		9.33	□□□□□ -0.92
CNOT2-238	ENST00000552422	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	9.33	□□□□□ -0.92
CNOT2-238	ENST00000552422	SPATA31A3	Q5VYP0	1347 aa		9.32	□□□□□ -0.92
CNOT2-238	ENST00000552422	NWD2	Q9ULI1	1742 aa		9.32	□□□□□ -0.92
CNOT2-238	ENST00000552422	SCARF1	Q14162	830 aa		9.32	□□□□□ -0.92
CNOT2-238	ENST00000552422	KRT28	Q7Z3Y7	464 aa		9.32	□□□□□ -0.92
CNOT2-238	ENST00000552422	NGDN	Q8NEJ9	315 aa	Known RBP	9.32	□□□□□ -0.92
CNOT2-238	ENST00000552422	ZFAND3	Q9H8U3	227 aa		9.32	□□□□□ -0.92
CNOT2-238	ENST00000552422	KIF20B	Q96Q89	1820 aa		9.32	□□□□□ -0.92
CNOT2-238	ENST00000552422	ARHGEF10	O15013	1369 aa		9.32	□□□□□ -0.92
CNOT2-238	ENST00000552422	CD163L1	Q9NR16	1453 aa		9.32	□□□□□ -0.92
CNOT2-238	ENST00000552422	ACE	P12821	1306 aa		9.31	□□□□□ -0.92
CNOT2-238	ENST00000552422	USP6	P35125	1406 aa		9.31	□□□□□ -0.92
CNOT2-238	ENST00000552422	CPSF1	Q10570	1443 aa	Known RBP	9.31	□□□□□ -0.92
CNOT2-238	ENST00000552422	PSME1	Q06323	249 aa		9.31	□□□□□ -0.92
CNOT2-238	ENST00000552422	MRPL14	Q6P1L8	145 aa	Known RBP	9.31	□□□□□ -0.92
CNOT2-238	ENST00000552422	ZFP42	Q96MM3	310 aa		9.31	□□□□□ -0.92
CNOT2-238	ENST00000552422	PUS7	Q96PZ0	661 aa	Known RBP	9.31	□□□□□ -0.92
CNOT2-238	ENST00000552422	GPSM3	Q9Y4H4	160 aa		9.31	□□□□□ -0.92
CNOT2-238	ENST00000552422	BRD4	O60885	1362 aa	Predicted RBP	9.3	□□□□□ -0.92
CNOT2-238	ENST00000552422	NINL	Q9Y2I6	1382 aa		9.3	□□□□□ -0.92
CNOT2-238	ENST00000552422	CCDC116	Q8IYX3	515 aa		9.3	□□□□□ -0.92
CNOT2-238	ENST00000552422	CDV3	Q9UKY7	258 aa	Known RBP	9.3	□□□□□ -0.92
CNOT2-238	ENST00000552422	EP400	Q96L91	3159 aa		9.3	□□□□□ -0.92
CNOT2-238	ENST00000552422	SSH2	Q76I76	1423 aa		9.3	□□□□□ -0.92
CNOT2-238	ENST00000552422	LTN1	O94822	1766 aa		9.29	□□□□□ -0.92
CNOT2-238	ENST00000552422	NRAP	Q86VF7	1730 aa		9.29	□□□□□ -0.92
CNOT2-238	ENST00000552422	ADAM32	Q8TC27	787 aa		9.29	□□□□□ -0.92
CNOT2-238	ENST00000552422	PURB	Q96QR8	312 aa	Known RBP	9.29	□□□□□ -0.92
CNOT2-238	ENST00000552422	OCSTAMP	Q9BR26	566 aa		9.29	□□□□□ -0.92
CNOT2-238	ENST00000552422	TRIM34	Q9BYJ4	488 aa		9.29	□□□□□ -0.92
CNOT2-238	ENST00000552422	CABP1	Q9NZU7	370 aa		9.29	□□□□□ -0.92
CNOT2-238	ENST00000552422	COL14A1	Q05707	1796 aa	Known RBP	9.29	□□□□□ -0.92
CNOT2-238	ENST00000552422	RGPD5	Q99666	1765 aa		9.28	□□□□□ -0.92
CNOT2-238	ENST00000552422	PRKCSH	P14314	528 aa	Predicted RBP	9.28	□□□□□ -0.92
CNOT2-238	ENST00000552422	EIF4G2	P78344	907 aa	Known RBP eCLIP	9.28	□□□□□ -0.92
CNOT2-238	ENST00000552422	TMF1	P82094	1093 aa		9.28	□□□□□ -0.92
CNOT2-238	ENST00000552422	KCTD15	Q96SI1	283 aa	Predicted RBP	9.28	□□□□□ -0.92
CNOT2-238	ENST00000552422	EMILIN1	Q9Y6C2	1016 aa		9.28	□□□□□ -0.92
CNOT2-238	ENST00000552422	ANKRD26	Q9UPS8	1709 aa		9.28	□□□□□ -0.92
CNOT2-238	ENST00000552422		A0A1W2PP64	1363 aa		9.27	□□□□□ -0.93
CNOT2-238	ENST00000552422	SLIT3	O75094	1523 aa		9.27	□□□□□ -0.93
CNOT2-238	ENST00000552422	TREML4	Q6UXN2	200 aa		9.27	□□□□□ -0.93
CNOT2-238	ENST00000552422	LMO7	Q8WWI1	1683 aa		9.26	□□□□□ -0.93
CNOT2-238	ENST00000552422	KTN1	Q86UP2	1357 aa	Known RBP	9.26	□□□□□ -0.93
CNOT2-238	ENST00000552422	EDC4	Q6P2E9	1401 aa	Known RBP	9.26	□□□□□ -0.93
CNOT2-238	ENST00000552422	UPP2	O95045	317 aa		9.26	□□□□□ -0.93
CNOT2-238	ENST00000552422	HSPA5	P11021	654 aa	Known RBP	9.26	□□□□□ -0.93
CNOT2-238	ENST00000552422	CDCA8	Q53HL2	280 aa		9.26	□□□□□ -0.93
CNOT2-238	ENST00000552422	C6orf118	Q5T5N4	469 aa		9.26	□□□□□ -0.93
CNOT2-238	ENST00000552422	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	9.26	□□□□□ -0.93
CNOT2-238	ENST00000552422	COL18A1	P39060	1754 aa		9.25	□□□□□ -0.93
CNOT2-238	ENST00000552422	WFS1	O76024	890 aa		9.25	□□□□□ -0.93
CNOT2-238	ENST00000552422	NBPF20	Q3BBV1	942 aa		9.25	□□□□□ -0.93
CNOT2-238	ENST00000552422	MEX3C	Q5U5Q3	659 aa	Known RBP	9.25	□□□□□ -0.93
CNOT2-238	ENST00000552422	DZIP3	Q86Y13	1208 aa	Known RBP	9.25	□□□□□ -0.93
CNOT2-238	ENST00000552422	GJD4	Q96KN9	370 aa	Predicted RBP	9.25	□□□□□ -0.93
CNOT2-238	ENST00000552422	PGPEP1	Q9NXJ5	209 aa		9.25	□□□□□ -0.93
CNOT2-238	ENST00000552422	USP19	O94966	1318 aa		9.25	□□□□□ -0.93
CNOT2-238	ENST00000552422	SLIT2	O94813	1529 aa		9.25	□□□□□ -0.93
CNOT2-238	ENST00000552422	ANKRD36B	Q8N2N9	1353 aa		9.24	□□□□□ -0.93
CNOT2-238	ENST00000552422	ADAMTS2	O95450	1211 aa		9.24	□□□□□ -0.93
CNOT2-238	ENST00000552422	BMP2	P12643	396 aa		9.24	□□□□□ -0.93
CNOT2-238	ENST00000552422	DHX9	Q08211	1270 aa	Known RBP	9.24	□□□□□ -0.93
CNOT2-238	ENST00000552422	LINC00528	Q8N1L1	170 aa		9.24	□□□□□ -0.93
CNOT2-238	ENST00000552422	MEIOB	Q8N635	442 aa		9.24	□□□□□ -0.93
CNOT2-238	ENST00000552422	BANK1	Q8NDB2	785 aa		9.24	□□□□□ -0.93
CNOT2-238	ENST00000552422	TMC1	Q8TDI8	760 aa		9.24	□□□□□ -0.93
CNOT2-238	ENST00000552422	SLC12A5	Q9H2X9	1139 aa		9.24	□□□□□ -0.93
CNOT2-238	ENST00000552422	TERF2IP	Q9NYB0	399 aa		9.24	□□□□□ -0.93
CNOT2-238	ENST00000552422	RGS17	Q9UGC6	210 aa	Predicted RBP	9.24	□□□□□ -0.93
CNOT2-238	ENST00000552422	NFAT5	O94916	1531 aa		9.24	□□□□□ -0.93
CNOT2-238	ENST00000552422	TTC21B	Q7Z4L5	1316 aa		9.24	□□□□□ -0.93
CNOT2-238	ENST00000552422	TTC21A	Q8NDW8	1320 aa		9.24	□□□□□ -0.93
CNOT2-238	ENST00000552422	INTS6L	Q5JSJ4	861 aa	Known RBP	9.23	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms