RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 PPP1R42Q7Z4L9 355 aa18.19■□□□□ 0.5
DDX54-210ENST00000552375 RNF123Q5XPI4 1314 aa18.19■□□□□ 0.5
DDX54-210ENST00000552375 C16orf71Q8IYS4 520 aaPredicted RBP18.18■□□□□ 0.5
DDX54-210ENST00000552375 RBM46Q8TBY0 533 aaKnown RBP18.18■□□□□ 0.5
DDX54-210ENST00000552375 ALDH1B1P30837 517 aa18.17■□□□□ 0.5
DDX54-210ENST00000552375 GNAI1P63096 354 aa18.17■□□□□ 0.5
DDX54-210ENST00000552375 AIMP1Q12904 312 aaKnown RBP18.17■□□□□ 0.5
DDX54-210ENST00000552375 DUSP27Q5VZP5 1158 aa18.17■□□□□ 0.5
DDX54-210ENST00000552375 SNED1Q8TER0 1413 aa18.16■□□□□ 0.5
DDX54-210ENST00000552375 HOXA10P31260 410 aaPredicted RBP18.16■□□□□ 0.5
DDX54-210ENST00000552375 FKBP4Q02790 459 aaKnown RBP eCLIP18.16■□□□□ 0.5
DDX54-210ENST00000552375 DIEXFQ68CQ4 756 aaKnown RBP18.16■□□□□ 0.5
DDX54-210ENST00000552375 RPGRQ92834 1020 aaKnown RBP18.16■□□□□ 0.5
DDX54-210ENST00000552375 UTP14AQ9BVJ6 771 aaKnown RBP18.16■□□□□ 0.5
DDX54-210ENST00000552375 RRAGCQ9HB90 399 aa18.16■□□□□ 0.5
DDX54-210ENST00000552375 DBF4Q9UBU7 674 aaPredicted RBP18.16■□□□□ 0.5
DDX54-210ENST00000552375 OLFM4Q6UX06 510 aa18.15■□□□□ 0.5
DDX54-210ENST00000552375 C3orf67Q6ZVT6 689 aa18.15■□□□□ 0.5
DDX54-210ENST00000552375 NLRP10Q86W26 655 aa18.15■□□□□ 0.5
DDX54-210ENST00000552375 RTKN2Q8IZC4 609 aa18.15■□□□□ 0.5
DDX54-210ENST00000552375 TCIRG1Q13488 830 aa18.14■□□□□ 0.49
DDX54-210ENST00000552375 TSR2Q969E8 191 aaKnown RBP18.14■□□□□ 0.49
DDX54-210ENST00000552375 VEGFAP15692 232 aaPredicted RBP18.13■□□□□ 0.49
DDX54-210ENST00000552375 FSTL1Q12841 308 aa18.13■□□□□ 0.49
DDX54-210ENST00000552375 DPY19L2Q6NUT2 758 aa18.13■□□□□ 0.49
DDX54-210ENST00000552375 WWC1Q8IX03 1113 aa18.13■□□□□ 0.49
DDX54-210ENST00000552375 PLBD2Q8NHP8 589 aa18.13■□□□□ 0.49
DDX54-210ENST00000552375 HYPKQ9NX55 129 aa18.13■□□□□ 0.49
DDX54-210ENST00000552375 CCDC27Q2M243 656 aa18.12■□□□□ 0.49
DDX54-210ENST00000552375 SLC10A5Q5PT55 438 aa18.12■□□□□ 0.49
DDX54-210ENST00000552375 CC2D2BQ6DHV5 1058 aa18.12■□□□□ 0.49
DDX54-210ENST00000552375 RBM17Q96I25 401 aaKnown RBP18.12■□□□□ 0.49
DDX54-210ENST00000552375 NLRP3Q96P20 1036 aa18.12■□□□□ 0.49
DDX54-210ENST00000552375 CRAMP1Q96RY5 1269 aa18.12■□□□□ 0.49
DDX54-210ENST00000552375 ZNF277Q9NRM2 450 aaPredicted RBP18.12■□□□□ 0.49
DDX54-210ENST00000552375 WDR90Q96KV7 1748 aa18.12■□□□□ 0.49
DDX54-210ENST00000552375 ELL2O00472 640 aaPredicted RBP18.11■□□□□ 0.49
DDX54-210ENST00000552375 APLP1P51693 650 aa18.11■□□□□ 0.49
DDX54-210ENST00000552375 SMC1BQ8NDV3 1235 aa18.11■□□□□ 0.49
DDX54-210ENST00000552375 PSMD1Q99460 953 aa18.11■□□□□ 0.49
DDX54-210ENST00000552375 SH3TC1Q8TE82 1336 aa18.11■□□□□ 0.49
DDX54-210ENST00000552375 PPEF1O14829 653 aaPredicted RBP18.1■□□□□ 0.49
DDX54-210ENST00000552375 ANKRD13DQ6ZTN6 518 aa18.1■□□□□ 0.49
DDX54-210ENST00000552375 MIER1Q8N108 512 aa18.1■□□□□ 0.49
DDX54-210ENST00000552375 TRMT112Q9UI30 125 aaKnown RBP18.1■□□□□ 0.49
DDX54-210ENST00000552375 DICER1Q9UPY3 1922 aaKnown RBP18.1■□□□□ 0.49
DDX54-210ENST00000552375 ABCC4O15439 1325 aa18.09■□□□□ 0.49
DDX54-210ENST00000552375 ISCA1Q9BUE6 129 aa18.09■□□□□ 0.49
DDX54-210ENST00000552375 POTECB2RU33 542 aa18.08■□□□□ 0.48
DDX54-210ENST00000552375 CCER2I3L3R5 266 aa18.08■□□□□ 0.48
DDX54-210ENST00000552375 HCLS1P14317 486 aaPredicted RBP18.08■□□□□ 0.48
DDX54-210ENST00000552375 IARSP41252 1262 aaKnown RBP18.08■□□□□ 0.48
DDX54-210ENST00000552375 GOLGA2Q08379 1002 aa18.08■□□□□ 0.48
DDX54-210ENST00000552375 GRIPAP1Q4V328 841 aa18.08■□□□□ 0.48
DDX54-210ENST00000552375 NCBP3Q53F19 620 aaKnown RBP18.08■□□□□ 0.48
DDX54-210ENST00000552375 C8orf58Q8NAV2 365 aa18.08■□□□□ 0.48
DDX54-210ENST00000552375 CCDC88AQ3V6T2 1871 aa18.07■□□□□ 0.48
DDX54-210ENST00000552375 ZNF541Q9H0D2 1346 aa18.07■□□□□ 0.48
DDX54-210ENST00000552375 DDNO94850 711 aaPredicted RBP18.07■□□□□ 0.48
DDX54-210ENST00000552375 SLC51AQ86UW1 340 aa18.07■□□□□ 0.48
DDX54-210ENST00000552375 SYNE4Q8N205 404 aa18.07■□□□□ 0.48
DDX54-210ENST00000552375 L3MBTL3Q96JM7 780 aaPredicted RBP18.07■□□□□ 0.48
DDX54-210ENST00000552375 CHMP4AQ9BY43 222 aa18.07■□□□□ 0.48
DDX54-210ENST00000552375 LAMB2P55268 1798 aa18.07■□□□□ 0.48
DDX54-210ENST00000552375 IL16Q14005 1332 aa18.06■□□□□ 0.48
DDX54-210ENST00000552375 FANCIQ9NVI1 1328 aa18.06■□□□□ 0.48
DDX54-210ENST00000552375 ATP5J2-PTCD1G3V325 749 aa18.05■□□□□ 0.48
DDX54-210ENST00000552375 TRIM28Q13263 835 aaKnown RBP18.05■□□□□ 0.48
DDX54-210ENST00000552375 CCDC30Q5VVM6 783 aa18.05■□□□□ 0.48
DDX54-210ENST00000552375 TSPYL6Q8N831 410 aa18.05■□□□□ 0.48
DDX54-210ENST00000552375 PHAXQ9H814 394 aaKnown RBP18.05■□□□□ 0.48
DDX54-210ENST00000552375 ATP6V0A2Q9Y487 856 aa18.05■□□□□ 0.48
DDX54-210ENST00000552375 CACNA1FO60840 1977 aa18.04■□□□□ 0.48
DDX54-210ENST00000552375 COL4A5P29400 1685 aa18.04■□□□□ 0.48
DDX54-210ENST00000552375 IQCA1LA6NCM1 817 aa18.04■□□□□ 0.48
DDX54-210ENST00000552375 FZD9O00144 591 aa18.04■□□□□ 0.48
DDX54-210ENST00000552375 TCERG1O14776 1098 aaKnown RBP18.04■□□□□ 0.48
DDX54-210ENST00000552375 RIC3Q7Z5B4 369 aa18.04■□□□□ 0.48
DDX54-210ENST00000552375 TMX4Q9H1E5 349 aaPredicted RBP18.04■□□□□ 0.48
DDX54-210ENST00000552375 SPINK5Q9NQ38 1064 aaPredicted RBP18.04■□□□□ 0.48
DDX54-210ENST00000552375 GRAPQ13588 217 aa18.03■□□□□ 0.48
DDX54-210ENST00000552375 DDX46Q7L014 1031 aaKnown RBP18.03■□□□□ 0.48
DDX54-210ENST00000552375 GRAPLQ8TC17 118 aaPredicted RBP18.03■□□□□ 0.48
DDX54-210ENST00000552375 JDP2Q8WYK2 163 aa18.03■□□□□ 0.48
DDX54-210ENST00000552375 ZNF428Q96B54 188 aa18.03■□□□□ 0.48
DDX54-210ENST00000552375 FAM89AQ96GI7 184 aa18.03■□□□□ 0.48
DDX54-210ENST00000552375 BBOX1O75936 387 aa18.02■□□□□ 0.48
DDX54-210ENST00000552375 DDX60Q8IY21 1712 aaKnown RBP18.01■□□□□ 0.47
DDX54-210ENST00000552375 DDX58O95786 925 aaKnown RBP18.01■□□□□ 0.47
DDX54-210ENST00000552375 WDR63Q8IWG1 891 aa18.01■□□□□ 0.47
DDX54-210ENST00000552375 LARGE2Q8N3Y3 721 aa18.01■□□□□ 0.47
DDX54-210ENST00000552375 IRS4O14654 1257 aaPredicted RBP18■□□□□ 0.47
DDX54-210ENST00000552375 SF3B3Q15393 1217 aaKnown RBP18■□□□□ 0.47
DDX54-210ENST00000552375 TWISTNBQ3B726 338 aaPredicted RBP18■□□□□ 0.47
DDX54-210ENST00000552375 TMC4Q7Z404 712 aa18■□□□□ 0.47
DDX54-210ENST00000552375 GPC2Q8N158 579 aa18■□□□□ 0.47
DDX54-210ENST00000552375 ZBTB38Q8NAP3 1195 aaPredicted RBP18■□□□□ 0.47
DDX54-210ENST00000552375 MYD88Q99836 296 aa18■□□□□ 0.47
DDX54-210ENST00000552375 STK31Q9BXU1 1019 aa18■□□□□ 0.47
DDX54-210ENST00000552375 RTFDC1Q9BY42 306 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms