RNA–Protein interactions for RNA: ENST00000552294.1

CTDSP2-208, Transcript of CTD small phosphatase 2, humanhuman

TSL 5

Gene CTDSP2, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-208ENST00000552294 NIP7Q9Y221 180 aaKnown RBP eCLIP9.21□□□□□ -0.94
CTDSP2-208ENST00000552294 UBN2Q6ZU65 1347 aa9.21□□□□□ -0.94
CTDSP2-208ENST00000552294 COL4A1P02462 1669 aa9.2□□□□□ -0.94
CTDSP2-208ENST00000552294 BTBD11A6QL63 1104 aa9.2□□□□□ -0.94
CTDSP2-208ENST00000552294 PCGF6Q9BYE7 350 aa9.2□□□□□ -0.94
CTDSP2-208ENST00000552294 GLIS2Q9BZE0 524 aaPredicted RBP9.2□□□□□ -0.94
CTDSP2-208ENST00000552294 RSPH6AQ9H0K4 717 aa9.2□□□□□ -0.94
CTDSP2-208ENST00000552294 NPHP1O15259 732 aa9.19□□□□□ -0.94
CTDSP2-208ENST00000552294 GPTP24298 496 aa9.19□□□□□ -0.94
CTDSP2-208ENST00000552294 PRKAR2BP31323 418 aa9.19□□□□□ -0.94
CTDSP2-208ENST00000552294 MLLT1Q03111 559 aaPredicted RBP9.19□□□□□ -0.94
CTDSP2-208ENST00000552294 CRY2Q49AN0 593 aa9.19□□□□□ -0.94
CTDSP2-208ENST00000552294 PAXIP1Q6ZW49 1069 aaPredicted RBP9.19□□□□□ -0.94
CTDSP2-208ENST00000552294 GPC2Q8N158 579 aa9.19□□□□□ -0.94
CTDSP2-208ENST00000552294 TLL2Q9Y6L7 1015 aa9.19□□□□□ -0.94
CTDSP2-208ENST00000552294 EGFRP00533 1210 aa9.18□□□□□ -0.94
CTDSP2-208ENST00000552294 SUSD4Q5VX71 490 aa9.18□□□□□ -0.94
CTDSP2-208ENST00000552294 TRPM4Q8TD43 1214 aa9.18□□□□□ -0.94
CTDSP2-208ENST00000552294 TEX13AQ9BXU3 409 aaPredicted RBP9.18□□□□□ -0.94
CTDSP2-208ENST00000552294 PDZRN3Q9UPQ7 1066 aa9.18□□□□□ -0.94
CTDSP2-208ENST00000552294 MAP2K1Q02750 393 aaPredicted RBP9.17□□□□□ -0.94
CTDSP2-208ENST00000552294 CXCL9Q07325 125 aa9.17□□□□□ -0.94
CTDSP2-208ENST00000552294 AOC3Q16853 763 aa9.17□□□□□ -0.94
CTDSP2-208ENST00000552294 SOGA3Q5TF21 947 aa9.17□□□□□ -0.94
CTDSP2-208ENST00000552294 CIAPIN1Q6FI81 312 aa9.17□□□□□ -0.94
CTDSP2-208ENST00000552294 CLEC4GQ6UXB4 293 aa9.17□□□□□ -0.94
CTDSP2-208ENST00000552294 SAPCD2Q86UD0 394 aa9.17□□□□□ -0.94
CTDSP2-208ENST00000552294 RTKN2Q8IZC4 609 aa9.17□□□□□ -0.94
CTDSP2-208ENST00000552294 PSMD1Q99460 953 aa9.17□□□□□ -0.94
CTDSP2-208ENST00000552294 THUMPD2Q9BTF0 503 aaKnown RBP9.17□□□□□ -0.94
CTDSP2-208ENST00000552294 MKI67P46013 3256 aaKnown RBP9.16□□□□□ -0.94
CTDSP2-208ENST00000552294 YDJCA8MPS7 323 aa9.16□□□□□ -0.94
CTDSP2-208ENST00000552294 HOXA10P31260 410 aaPredicted RBP9.16□□□□□ -0.94
CTDSP2-208ENST00000552294 GMPSP49915 693 aaPredicted RBP9.16□□□□□ -0.94
CTDSP2-208ENST00000552294 SOX10P56693 466 aa9.16□□□□□ -0.94
CTDSP2-208ENST00000552294 TPTE2Q6XPS3 522 aa9.16□□□□□ -0.94
CTDSP2-208ENST00000552294 LRP10Q7Z4F1 713 aa9.16□□□□□ -0.94
CTDSP2-208ENST00000552294 PNMA8AQ86V59 439 aaPredicted RBP9.16□□□□□ -0.94
CTDSP2-208ENST00000552294 CFAP44Q96MT7 982 aa9.16□□□□□ -0.94
CTDSP2-208ENST00000552294 ZBTB3Q9H5J0 574 aa9.16□□□□□ -0.94
CTDSP2-208ENST00000552294 KCNQ5Q9NR82 932 aa9.16□□□□□ -0.94
CTDSP2-208ENST00000552294 HTTP42858 3142 aa9.15□□□□□ -0.94
CTDSP2-208ENST00000552294 ASTN2O75129 1339 aaPredicted RBP9.15□□□□□ -0.94
CTDSP2-208ENST00000552294 CELF2O95319 508 aaKnown RBP9.15□□□□□ -0.94
CTDSP2-208ENST00000552294 NTSR2O95665 410 aa9.15□□□□□ -0.94
CTDSP2-208ENST00000552294 ANXA1P04083 346 aa9.15□□□□□ -0.94
CTDSP2-208ENST00000552294 SNRPA1P09661 255 aaKnown RBP9.15□□□□□ -0.94
CTDSP2-208ENST00000552294 PROSER3Q2NL68 480 aa9.15□□□□□ -0.94
CTDSP2-208ENST00000552294 LARGE2Q8N3Y3 721 aa9.15□□□□□ -0.94
CTDSP2-208ENST00000552294 GAS2L2Q8NHY3 880 aa9.15□□□□□ -0.94
CTDSP2-208ENST00000552294 ZNF408Q9H9D4 720 aa9.15□□□□□ -0.94
CTDSP2-208ENST00000552294 GPRC5DQ9NZD1 345 aa9.15□□□□□ -0.94
CTDSP2-208ENST00000552294 NPC1L1Q9UHC9 1359 aa9.14□□□□□ -0.95
CTDSP2-208ENST00000552294 CASP8AP2Q9UKL3 1982 aa9.14□□□□□ -0.95
CTDSP2-208ENST00000552294 FAM155AB1AL88 458 aaPredicted RBP9.14□□□□□ -0.95
CTDSP2-208ENST00000552294 RAD17O75943 681 aa9.14□□□□□ -0.95
CTDSP2-208ENST00000552294 MYL6BP14649 208 aa9.14□□□□□ -0.95
CTDSP2-208ENST00000552294 TRIM26Q12899 539 aaPredicted RBP9.14□□□□□ -0.95
CTDSP2-208ENST00000552294 DGKZQ13574 1117 aa9.14□□□□□ -0.95
CTDSP2-208ENST00000552294 ZNF34Q8IZ26 560 aa9.14□□□□□ -0.95
CTDSP2-208ENST00000552294 TIMELESSQ9UNS1 1208 aa9.14□□□□□ -0.95
CTDSP2-208ENST00000552294 ZBTB12Q9Y330 459 aaPredicted RBP9.14□□□□□ -0.95
CTDSP2-208ENST00000552294 RRP7AQ9Y3A4 280 aaKnown RBP9.14□□□□□ -0.95
CTDSP2-208ENST00000552294 RIC1Q4ADV7 1423 aa9.14□□□□□ -0.95
CTDSP2-208ENST00000552294 DUOX1Q9NRD9 1551 aa9.13□□□□□ -0.95
CTDSP2-208ENST00000552294 PPEF1O14829 653 aaPredicted RBP9.13□□□□□ -0.95
CTDSP2-208ENST00000552294 PPIP5K2O43314 1243 aa9.13□□□□□ -0.95
CTDSP2-208ENST00000552294 ALDH1B1P30837 517 aa9.13□□□□□ -0.95
CTDSP2-208ENST00000552294 EIF6P56537 245 aaKnown RBP9.13□□□□□ -0.95
CTDSP2-208ENST00000552294 PDIA6Q15084 440 aa9.13□□□□□ -0.95
CTDSP2-208ENST00000552294 USP50Q70EL3 339 aaPredicted RBP9.13□□□□□ -0.95
CTDSP2-208ENST00000552294 USP48Q86UV5 1035 aa9.13□□□□□ -0.95
CTDSP2-208ENST00000552294 JDP2Q8WYK2 163 aa9.13□□□□□ -0.95
CTDSP2-208ENST00000552294 PGAP2Q9UHJ9 254 aa9.13□□□□□ -0.95
CTDSP2-208ENST00000552294 SCAF8Q9UPN6 1271 aaKnown RBP9.13□□□□□ -0.95
CTDSP2-208ENST00000552294 ABCC4O15439 1325 aa9.12□□□□□ -0.95
CTDSP2-208ENST00000552294 MAP3K15Q6ZN16 1313 aa9.12□□□□□ -0.95
CTDSP2-208ENST00000552294 ADM5C9JUS6 153 aa9.12□□□□□ -0.95
CTDSP2-208ENST00000552294 SAMD7Q7Z3H4 446 aa9.12□□□□□ -0.95
CTDSP2-208ENST00000552294 TAF1P21675 1872 aa9.11□□□□□ -0.95
CTDSP2-208ENST00000552294 HCLS1P14317 486 aaPredicted RBP9.11□□□□□ -0.95
CTDSP2-208ENST00000552294 LMOD1P29536 600 aaPredicted RBP9.11□□□□□ -0.95
CTDSP2-208ENST00000552294 MAP2K2P36507 400 aa9.11□□□□□ -0.95
CTDSP2-208ENST00000552294 EIF4A1P60842 406 aaKnown RBP9.11□□□□□ -0.95
CTDSP2-208ENST00000552294 CRAMP1Q96RY5 1269 aa9.11□□□□□ -0.95
CTDSP2-208ENST00000552294 ADARB2Q9NS39 739 aaKnown RBP9.11□□□□□ -0.95
CTDSP2-208ENST00000552294 ZNF652Q9Y2D9 606 aa9.11□□□□□ -0.95
CTDSP2-208ENST00000552294 BRCA2P51587 3418 aa9.11□□□□□ -0.95
CTDSP2-208ENST00000552294 CENPFP49454 3210 aa9.1□□□□□ -0.95
CTDSP2-208ENST00000552294 WTIPA6NIX2 430 aaPredicted RBP9.1□□□□□ -0.95
CTDSP2-208ENST00000552294 GTF2E1P29083 439 aaPredicted RBP9.1□□□□□ -0.95
CTDSP2-208ENST00000552294 ECE1P42892 770 aa9.1□□□□□ -0.95
CTDSP2-208ENST00000552294 BRPF1P55201 1214 aaPredicted RBP9.1□□□□□ -0.95
CTDSP2-208ENST00000552294 NIM1KQ8IY84 436 aa9.1□□□□□ -0.95
CTDSP2-208ENST00000552294 RPGRQ92834 1020 aaKnown RBP9.1□□□□□ -0.95
CTDSP2-208ENST00000552294 RTFDC1Q9BY42 306 aaPredicted RBP9.1□□□□□ -0.95
CTDSP2-208ENST00000552294 ZNRF3Q9ULT6 936 aa9.1□□□□□ -0.95
CTDSP2-208ENST00000552294 ATP6V0A2Q9Y487 856 aa9.1□□□□□ -0.95
CTDSP2-208ENST00000552294 RTL9Q8NET4 1388 aa9.1□□□□□ -0.95
CTDSP2-208ENST00000552294 NUP98P52948 1817 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms