RNA–Protein interactions for RNA: ENST00000552239.1

TMCC3-204, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

TSL 4

Gene TMCC3, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-204ENST00000552239 TCIRG1Q13488 830 aa14.32□□□□□ -0.12
TMCC3-204ENST00000552239 CCDC27Q2M243 656 aa14.32□□□□□ -0.12
TMCC3-204ENST00000552239 PARP10Q53GL7 1025 aa14.32□□□□□ -0.12
TMCC3-204ENST00000552239 ANKRD13DQ6ZTN6 518 aa14.32□□□□□ -0.12
TMCC3-204ENST00000552239 SLC51AQ86UW1 340 aa14.32□□□□□ -0.12
TMCC3-204ENST00000552239 NLRP10Q86W26 655 aa14.32□□□□□ -0.12
TMCC3-204ENST00000552239 C7orf43Q8WVR3 580 aa14.32□□□□□ -0.12
TMCC3-204ENST00000552239 UTP14AQ9BVJ6 771 aaKnown RBP14.32□□□□□ -0.12
TMCC3-204ENST00000552239 ATP5J2-PTCD1G3V325 749 aa14.31□□□□□ -0.12
TMCC3-204ENST00000552239 CRY2Q49AN0 593 aa14.31□□□□□ -0.12
TMCC3-204ENST00000552239 HYPKQ9NX55 129 aa14.31□□□□□ -0.12
TMCC3-204ENST00000552239 HCLS1P14317 486 aaPredicted RBP14.3□□□□□ -0.12
TMCC3-204ENST00000552239 ALDH1B1P30837 517 aa14.3□□□□□ -0.12
TMCC3-204ENST00000552239 HSP90AB3PQ58FF7 597 aa14.3□□□□□ -0.12
TMCC3-204ENST00000552239 PLBD2Q8NHP8 589 aa14.3□□□□□ -0.12
TMCC3-204ENST00000552239 RPGRQ92834 1020 aaKnown RBP14.3□□□□□ -0.12
TMCC3-204ENST00000552239 RRAGCQ9HB90 399 aa14.3□□□□□ -0.12
TMCC3-204ENST00000552239 TRMT112Q9UI30 125 aaKnown RBP14.3□□□□□ -0.12
TMCC3-204ENST00000552239 IBTKQ9P2D0 1353 aaPredicted RBP14.3□□□□□ -0.12
TMCC3-204ENST00000552239 NLRP3Q96P20 1036 aa14.29□□□□□ -0.12
TMCC3-204ENST00000552239 TAOK3Q9H2K8 898 aa14.29□□□□□ -0.12
TMCC3-204ENST00000552239 TIAM2Q8IVF5 1701 aa14.29□□□□□ -0.12
TMCC3-204ENST00000552239 HOXA10P31260 410 aaPredicted RBP14.28□□□□□ -0.12
TMCC3-204ENST00000552239 CCDC93Q567U6 631 aa14.28□□□□□ -0.12
TMCC3-204ENST00000552239 RTL5Q5HYW3 569 aaPredicted RBP14.28□□□□□ -0.12
TMCC3-204ENST00000552239 SLC10A5Q5PT55 438 aa14.28□□□□□ -0.12
TMCC3-204ENST00000552239 RIC3Q7Z5B4 369 aa14.28□□□□□ -0.12
TMCC3-204ENST00000552239 ISCA1Q9BUE6 129 aa14.28□□□□□ -0.12
TMCC3-204ENST00000552239 SOGA3Q5TF21 947 aa14.27□□□□□ -0.13
TMCC3-204ENST00000552239 CCDC30Q5VVM6 783 aa14.27□□□□□ -0.13
TMCC3-204ENST00000552239 FAM89AQ96GI7 184 aa14.27□□□□□ -0.13
TMCC3-204ENST00000552239 RBM17Q96I25 401 aaKnown RBP14.27□□□□□ -0.13
TMCC3-204ENST00000552239 SPINK5Q9NQ38 1064 aaPredicted RBP14.27□□□□□ -0.13
TMCC3-204ENST00000552239 ZNF277Q9NRM2 450 aaPredicted RBP14.27□□□□□ -0.13
TMCC3-204ENST00000552239 DICER1Q9UPY3 1922 aaKnown RBP14.27□□□□□ -0.13
TMCC3-204ENST00000552239 LAMB2P55268 1798 aa14.27□□□□□ -0.13
TMCC3-204ENST00000552239 RIC1Q4ADV7 1423 aa14.26□□□□□ -0.13
TMCC3-204ENST00000552239 IL16Q14005 1332 aa14.26□□□□□ -0.13
TMCC3-204ENST00000552239 KDM2BQ8NHM5 1336 aa14.26□□□□□ -0.13
TMCC3-204ENST00000552239 LTBP3Q9NS15 1303 aa14.26□□□□□ -0.13
TMCC3-204ENST00000552239 FANCIQ9NVI1 1328 aa14.26□□□□□ -0.13
TMCC3-204ENST00000552239 GLTPD2A6NH11 291 aa14.26□□□□□ -0.13
TMCC3-204ENST00000552239 GOLGA2Q08379 1002 aa14.26□□□□□ -0.13
TMCC3-204ENST00000552239 TWISTNBQ3B726 338 aaPredicted RBP14.26□□□□□ -0.13
TMCC3-204ENST00000552239 TAF1P21675 1872 aa14.25□□□□□ -0.13
TMCC3-204ENST00000552239 SH3TC1Q8TE82 1336 aa14.25□□□□□ -0.13
TMCC3-204ENST00000552239 FKBP4Q02790 459 aaKnown RBP eCLIP14.25□□□□□ -0.13
TMCC3-204ENST00000552239 NCBP3Q53F19 620 aaKnown RBP14.25□□□□□ -0.13
TMCC3-204ENST00000552239 G2E3Q7L622 706 aa14.25□□□□□ -0.13
TMCC3-204ENST00000552239 WDR63Q8IWG1 891 aa14.25□□□□□ -0.13
TMCC3-204ENST00000552239 JARID2Q92833 1246 aaPredicted RBP14.25□□□□□ -0.13
TMCC3-204ENST00000552239 CRAMP1Q96RY5 1269 aa14.25□□□□□ -0.13
TMCC3-204ENST00000552239 MYD88Q99836 296 aa14.25□□□□□ -0.13
TMCC3-204ENST00000552239 ABCC4O15439 1325 aa14.24□□□□□ -0.13
TMCC3-204ENST00000552239 PPEF1O14829 653 aaPredicted RBP14.24□□□□□ -0.13
TMCC3-204ENST00000552239 EXOSC9Q06265 439 aaKnown RBP14.24□□□□□ -0.13
TMCC3-204ENST00000552239 RTKN2Q8IZC4 609 aa14.24□□□□□ -0.13
TMCC3-204ENST00000552239 DDX60Q8IY21 1712 aaKnown RBP14.24□□□□□ -0.13
TMCC3-204ENST00000552239 RNF123Q5XPI4 1314 aa14.23□□□□□ -0.13
TMCC3-204ENST00000552239 ZC3H4Q9UPT8 1303 aaKnown RBP14.23□□□□□ -0.13
TMCC3-204ENST00000552239 TOMM70O94826 608 aa14.23□□□□□ -0.13
TMCC3-204ENST00000552239 SLC4A2P04920 1241 aa14.23□□□□□ -0.13
TMCC3-204ENST00000552239 C16orf71Q8IYS4 520 aaPredicted RBP14.23□□□□□ -0.13
TMCC3-204ENST00000552239 SNED1Q8TER0 1413 aa14.23□□□□□ -0.13
TMCC3-204ENST00000552239 PI4KAP2A4QPH2 592 aa14.22□□□□□ -0.13
TMCC3-204ENST00000552239 POTECB2RU33 542 aa14.22□□□□□ -0.13
TMCC3-204ENST00000552239 VAMP4O75379 141 aa14.22□□□□□ -0.13
TMCC3-204ENST00000552239 DDNO94850 711 aaPredicted RBP14.22□□□□□ -0.13
TMCC3-204ENST00000552239 DPY19L2Q6NUT2 758 aa14.22□□□□□ -0.13
TMCC3-204ENST00000552239 PI4KAP1Q8N8J0 262 aa14.22□□□□□ -0.13
TMCC3-204ENST00000552239 METTL22Q9BUU2 404 aaPredicted RBP14.22□□□□□ -0.13
TMCC3-204ENST00000552239 STK31Q9BXU1 1019 aa14.22□□□□□ -0.13
TMCC3-204ENST00000552239 MAP3K2Q9Y2U5 619 aa14.22□□□□□ -0.13
TMCC3-204ENST00000552239 DDX58O95786 925 aaKnown RBP14.21□□□□□ -0.13
TMCC3-204ENST00000552239 IARSP41252 1262 aaKnown RBP14.21□□□□□ -0.13
TMCC3-204ENST00000552239 TRIM28Q13263 835 aaKnown RBP14.21□□□□□ -0.13
TMCC3-204ENST00000552239 DDX46Q7L014 1031 aaKnown RBP14.21□□□□□ -0.13
TMCC3-204ENST00000552239 IRS4O14654 1257 aaPredicted RBP14.2□□□□□ -0.14
TMCC3-204ENST00000552239 VEGFAP15692 232 aaPredicted RBP14.2□□□□□ -0.14
TMCC3-204ENST00000552239 CC2D2BQ6DHV5 1058 aa14.2□□□□□ -0.14
TMCC3-204ENST00000552239 KSR2Q6VAB6 950 aa14.2□□□□□ -0.14
TMCC3-204ENST00000552239 PSMD1Q99460 953 aa14.2□□□□□ -0.14
TMCC3-204ENST00000552239 CHMP4AQ9BY43 222 aa14.2□□□□□ -0.14
TMCC3-204ENST00000552239 ATP6V0A2Q9Y487 856 aa14.2□□□□□ -0.14
TMCC3-204ENST00000552239 COL4A1P02462 1669 aa14.2□□□□□ -0.14
TMCC3-204ENST00000552239 ZNF541Q9H0D2 1346 aa14.19□□□□□ -0.14
TMCC3-204ENST00000552239 BBOX1O75936 387 aa14.19□□□□□ -0.14
TMCC3-204ENST00000552239 IGKV5-2P06315 115 aa14.19□□□□□ -0.14
TMCC3-204ENST00000552239 HSPA6P17066 643 aa14.19□□□□□ -0.14
TMCC3-204ENST00000552239 GRAPQ13588 217 aa14.19□□□□□ -0.14
TMCC3-204ENST00000552239 ZBTB38Q8NAP3 1195 aaPredicted RBP14.19□□□□□ -0.14
TMCC3-204ENST00000552239 CCDC191Q8NCU4 936 aa14.19□□□□□ -0.14
TMCC3-204ENST00000552239 GRAPLQ8TC17 118 aaPredicted RBP14.19□□□□□ -0.14
TMCC3-204ENST00000552239 CELF1Q92879 486 aaKnown RBP14.19□□□□□ -0.14
TMCC3-204ENST00000552239 CWC25Q9NXE8 425 aaPredicted RBP14.19□□□□□ -0.14
TMCC3-204ENST00000552239 COL4A5P29400 1685 aa14.19□□□□□ -0.14
TMCC3-204ENST00000552239 CEP350Q5VT06 3117 aa14.19□□□□□ -0.14
TMCC3-204ENST00000552239 FLIIQ13045 1269 aa14.18□□□□□ -0.14
TMCC3-204ENST00000552239 SF3B3Q15393 1217 aaKnown RBP14.18□□□□□ -0.14
TMCC3-204ENST00000552239 CWF19L2Q2TBE0 894 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms