RNA–Protein interactions for RNA: ENST00000552231.5

CNOT2-236, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 1,545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-236ENST00000552231 NTSR2O95665 410 aa22.62■■□□□ 1.21
CNOT2-236ENST00000552231 COPS6Q7L5N1 327 aa22.62■■□□□ 1.21
CNOT2-236ENST00000552231 VEGFAP15692 232 aaPredicted RBP22.61■■□□□ 1.21
CNOT2-236ENST00000552231 NECTIN2Q92692 538 aa22.61■■□□□ 1.21
CNOT2-236ENST00000552231 NUP98P52948 1817 aa22.6■■□□□ 1.21
CNOT2-236ENST00000552231 ZNF853P0CG23 659 aa22.6■■□□□ 1.21
CNOT2-236ENST00000552231 HOXA10P31260 410 aaPredicted RBP22.6■■□□□ 1.21
CNOT2-236ENST00000552231 APLP1P51693 650 aa22.6■■□□□ 1.21
CNOT2-236ENST00000552231 HSP90AB3PQ58FF7 597 aa22.6■■□□□ 1.21
CNOT2-236ENST00000552231 RTKN2Q8IZC4 609 aa22.6■■□□□ 1.21
CNOT2-236ENST00000552231 XAGE3Q8WTP9 111 aa22.6■■□□□ 1.21
CNOT2-236ENST00000552231 ARFGEF2Q9Y6D5 1785 aa22.6■■□□□ 1.21
CNOT2-236ENST00000552231 FKBP4Q02790 459 aaKnown RBP eCLIP22.59■■□□□ 1.21
CNOT2-236ENST00000552231 CALD1Q05682 793 aaKnown RBP22.58■■□□□ 1.21
CNOT2-236ENST00000552231 AIMP1Q12904 312 aaKnown RBP22.58■■□□□ 1.21
CNOT2-236ENST00000552231 HDGFL1Q5TGJ6 251 aa22.58■■□□□ 1.21
CNOT2-236ENST00000552231 TNRC6CQ9HCJ0 1690 aaKnown RBP22.58■■□□□ 1.21
CNOT2-236ENST00000552231 RNF123Q5XPI4 1314 aa22.57■■□□□ 1.2
CNOT2-236ENST00000552231 SLC10A5Q5PT55 438 aa22.57■■□□□ 1.2
CNOT2-236ENST00000552231 RPGRQ92834 1020 aaKnown RBP22.57■■□□□ 1.2
CNOT2-236ENST00000552231 UTP14AQ9BVJ6 771 aaKnown RBP22.57■■□□□ 1.2
CNOT2-236ENST00000552231 MBIPQ9NS73 344 aa22.57■■□□□ 1.2
CNOT2-236ENST00000552231 IFT57Q9NWB7 429 aa22.57■■□□□ 1.2
CNOT2-236ENST00000552231 CHPF2Q9P2E5 772 aa22.57■■□□□ 1.2
CNOT2-236ENST00000552231 CC2D2BQ6DHV5 1058 aa22.57■■□□□ 1.2
CNOT2-236ENST00000552231 POTECB2RU33 542 aa22.56■■□□□ 1.2
CNOT2-236ENST00000552231 TCIRG1Q13488 830 aa22.56■■□□□ 1.2
CNOT2-236ENST00000552231 DUSP27Q5VZP5 1158 aa22.56■■□□□ 1.2
CNOT2-236ENST00000552231 CRAMP1Q96RY5 1269 aa22.56■■□□□ 1.2
CNOT2-236ENST00000552231 DBF4Q9UBU7 674 aaPredicted RBP22.56■■□□□ 1.2
CNOT2-236ENST00000552231 GNAI1P63096 354 aa22.55■■□□□ 1.2
CNOT2-236ENST00000552231 OLFM4Q6UX06 510 aa22.55■■□□□ 1.2
CNOT2-236ENST00000552231 NLRP10Q86W26 655 aa22.55■■□□□ 1.2
CNOT2-236ENST00000552231 SMC1BQ8NDV3 1235 aa22.55■■□□□ 1.2
CNOT2-236ENST00000552231 RBM17Q96I25 401 aaKnown RBP22.55■■□□□ 1.2
CNOT2-236ENST00000552231 NLRP3Q96P20 1036 aa22.55■■□□□ 1.2
CNOT2-236ENST00000552231 TIAM2Q8IVF5 1701 aa22.54■■□□□ 1.2
CNOT2-236ENST00000552231 GRIPAP1Q4V328 841 aa22.54■■□□□ 1.2
CNOT2-236ENST00000552231 PSMD1Q99460 953 aa22.53■■□□□ 1.2
CNOT2-236ENST00000552231 ZNF277Q9NRM2 450 aaPredicted RBP22.53■■□□□ 1.2
CNOT2-236ENST00000552231 HYPKQ9NX55 129 aa22.53■■□□□ 1.2
CNOT2-236ENST00000552231 SNED1Q8TER0 1413 aa22.53■■□□□ 1.2
CNOT2-236ENST00000552231 CCDC88AQ3V6T2 1871 aa22.53■■□□□ 1.2
CNOT2-236ENST00000552231 C3orf67Q6ZVT6 689 aa22.52■■□□□ 1.2
CNOT2-236ENST00000552231 SYNE4Q8N205 404 aa22.52■■□□□ 1.2
CNOT2-236ENST00000552231 PLBD2Q8NHP8 589 aa22.52■■□□□ 1.2
CNOT2-236ENST00000552231 DICER1Q9UPY3 1922 aaKnown RBP22.52■■□□□ 1.2
CNOT2-236ENST00000552231 ANKRD13DQ6ZTN6 518 aa22.52■■□□□ 1.19
CNOT2-236ENST00000552231 WDR90Q96KV7 1748 aa22.51■■□□□ 1.19
CNOT2-236ENST00000552231 CACNA1SQ13698 1873 aa22.51■■□□□ 1.19
CNOT2-236ENST00000552231 DDNO94850 711 aaPredicted RBP22.51■■□□□ 1.19
CNOT2-236ENST00000552231 IARSP41252 1262 aaKnown RBP22.5■■□□□ 1.19
CNOT2-236ENST00000552231 DNAJC5GQ8N7S2 189 aa22.5■■□□□ 1.19
CNOT2-236ENST00000552231 TRMT112Q9UI30 125 aaKnown RBP22.5■■□□□ 1.19
CNOT2-236ENST00000552231 PPEF1O14829 653 aaPredicted RBP22.48■■□□□ 1.19
CNOT2-236ENST00000552231 CCDC27Q2M243 656 aa22.48■■□□□ 1.19
CNOT2-236ENST00000552231 L3MBTL3Q96JM7 780 aaPredicted RBP22.48■■□□□ 1.19
CNOT2-236ENST00000552231 ISCA1Q9BUE6 129 aa22.48■■□□□ 1.19
CNOT2-236ENST00000552231 CHMP4AQ9BY43 222 aa22.48■■□□□ 1.19
CNOT2-236ENST00000552231 SH3TC1Q8TE82 1336 aa22.48■■□□□ 1.19
CNOT2-236ENST00000552231 FZD9O00144 591 aa22.47■■□□□ 1.19
CNOT2-236ENST00000552231 NCBP3Q53F19 620 aaKnown RBP22.47■■□□□ 1.19
CNOT2-236ENST00000552231 HCLS1P14317 486 aaPredicted RBP22.47■■□□□ 1.19
CNOT2-236ENST00000552231 TRIM28Q13263 835 aaKnown RBP22.47■■□□□ 1.19
CNOT2-236ENST00000552231 IQCA1LA6NCM1 817 aa22.46■■□□□ 1.19
CNOT2-236ENST00000552231 ATP6V0A2Q9Y487 856 aa22.46■■□□□ 1.19
CNOT2-236ENST00000552231 BBOX1O75936 387 aa22.45■■□□□ 1.18
CNOT2-236ENST00000552231 C8orf58Q8NAV2 365 aa22.45■■□□□ 1.18
CNOT2-236ENST00000552231 JDP2Q8WYK2 163 aa22.45■■□□□ 1.18
CNOT2-236ENST00000552231 TMX4Q9H1E5 349 aaPredicted RBP22.45■■□□□ 1.18
CNOT2-236ENST00000552231 ABCC4O15439 1325 aa22.45■■□□□ 1.18
CNOT2-236ENST00000552231 ELL2O00472 640 aaPredicted RBP22.44■■□□□ 1.18
CNOT2-236ENST00000552231 ZNF541Q9H0D2 1346 aa22.44■■□□□ 1.18
CNOT2-236ENST00000552231 WWC1Q8IX03 1113 aa22.43■■□□□ 1.18
CNOT2-236ENST00000552231 VPS33BQ9H267 617 aa22.43■■□□□ 1.18
CNOT2-236ENST00000552231 ANKRD36CQ5JPF3 1778 aa22.43■■□□□ 1.18
CNOT2-236ENST00000552231 DDX46Q7L014 1031 aaKnown RBP22.42■■□□□ 1.18
CNOT2-236ENST00000552231 ATP5J2-PTCD1G3V325 749 aa22.41■■□□□ 1.18
CNOT2-236ENST00000552231 TCERG1O14776 1098 aaKnown RBP22.41■■□□□ 1.18
CNOT2-236ENST00000552231 GOLGA2Q08379 1002 aa22.41■■□□□ 1.18
CNOT2-236ENST00000552231 CCDC30Q5VVM6 783 aa22.41■■□□□ 1.18
CNOT2-236ENST00000552231 RIC3Q7Z5B4 369 aa22.41■■□□□ 1.18
CNOT2-236ENST00000552231 SP8Q8IXZ3 490 aa22.41■■□□□ 1.18
CNOT2-236ENST00000552231 TAF1DQ9H5J8 278 aaPredicted RBP22.41■■□□□ 1.18
CNOT2-236ENST00000552231 PHAXQ9H814 394 aaKnown RBP22.41■■□□□ 1.18
CNOT2-236ENST00000552231 GRAPQ13588 217 aa22.41■■□□□ 1.18
CNOT2-236ENST00000552231 CHADLQ6NUI6 762 aa22.41■■□□□ 1.18
CNOT2-236ENST00000552231 SLC51AQ86UW1 340 aa22.41■■□□□ 1.18
CNOT2-236ENST00000552231 GPC2Q8N158 579 aa22.41■■□□□ 1.18
CNOT2-236ENST00000552231 GRAPLQ8TC17 118 aaPredicted RBP22.41■■□□□ 1.18
CNOT2-236ENST00000552231 FAM89AQ96GI7 184 aa22.41■■□□□ 1.18
CNOT2-236ENST00000552231 HTRA3P83110 453 aa22.4■■□□□ 1.18
CNOT2-236ENST00000552231 ERICH6BQ5W0A0 696 aa22.4■■□□□ 1.18
CNOT2-236ENST00000552231 LARGE2Q8N3Y3 721 aa22.4■■□□□ 1.18
CNOT2-236ENST00000552231 KLRG1Q96E93 195 aa22.4■■□□□ 1.18
CNOT2-236ENST00000552231 RTFDC1Q9BY42 306 aaPredicted RBP22.4■■□□□ 1.18
CNOT2-236ENST00000552231 IL16Q14005 1332 aa22.4■■□□□ 1.18
CNOT2-236ENST00000552231 EIF6P56537 245 aaKnown RBP22.39■■□□□ 1.17
CNOT2-236ENST00000552231 SF3B3Q15393 1217 aaKnown RBP22.39■■□□□ 1.17
CNOT2-236ENST00000552231 TMC4Q7Z404 712 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms