RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 KIAA1551Q9HCM1 1747 aa7.66□□□□□ -1.18
CCDC65-204ENST00000552188 NRXN2Q9P2S2 1712 aa7.66□□□□□ -1.18
CCDC65-204ENST00000552188 ANKRD36CQ5JPF3 1778 aa7.66□□□□□ -1.18
CCDC65-204ENST00000552188 A0A0G2JLW4 131 aa7.65□□□□□ -1.18
CCDC65-204ENST00000552188 POLRMTO00411 1230 aaKnown RBP7.65□□□□□ -1.18
CCDC65-204ENST00000552188 ST5P78524 1137 aa7.65□□□□□ -1.18
CCDC65-204ENST00000552188 DDR1Q08345 913 aa7.65□□□□□ -1.18
CCDC65-204ENST00000552188 TBC1D9BQ66K14 1250 aa7.65□□□□□ -1.18
CCDC65-204ENST00000552188 C10orf71Q711Q0 1435 aa7.65□□□□□ -1.18
CCDC65-204ENST00000552188 CARMIL3Q8ND23 1372 aa7.65□□□□□ -1.18
CCDC65-204ENST00000552188 FBXO22Q8NEZ5 403 aa7.65□□□□□ -1.18
CCDC65-204ENST00000552188 BCL2L12Q9HB09 334 aa7.65□□□□□ -1.18
CCDC65-204ENST00000552188 PIM2Q9P1W9 311 aa7.65□□□□□ -1.18
CCDC65-204ENST00000552188 DLEC1Q9Y238 1755 aa7.65□□□□□ -1.18
CCDC65-204ENST00000552188 ANKRD31Q8N7Z5 1873 aa7.64□□□□□ -1.19
CCDC65-204ENST00000552188 ERBB4Q15303 1308 aa7.64□□□□□ -1.19
CCDC65-204ENST00000552188 FAM177BA6PVY3 158 aa7.64□□□□□ -1.19
CCDC65-204ENST00000552188 NBPF26B4DH59 902 aa7.64□□□□□ -1.19
CCDC65-204ENST00000552188 H0YIN7 160 aa7.64□□□□□ -1.19
CCDC65-204ENST00000552188 CHL1O00533 1208 aa7.64□□□□□ -1.19
CCDC65-204ENST00000552188 CAMTA2O94983 1202 aa7.64□□□□□ -1.19
CCDC65-204ENST00000552188 DPEP1P16444 411 aa7.64□□□□□ -1.19
CCDC65-204ENST00000552188 PDE6BP35913 854 aa7.64□□□□□ -1.19
CCDC65-204ENST00000552188 NBPF10Q6P3W6 841 aaKnown RBP7.64□□□□□ -1.19
CCDC65-204ENST00000552188 CLEC4GQ6UXB4 293 aa7.64□□□□□ -1.19
CCDC65-204ENST00000552188 NBPF5PQ86XG9 351 aaPredicted RBP7.64□□□□□ -1.19
CCDC65-204ENST00000552188 NBPF15Q8N660 670 aa7.64□□□□□ -1.19
CCDC65-204ENST00000552188 CNBD1Q8NA66 436 aa7.64□□□□□ -1.19
CCDC65-204ENST00000552188 CHMP4AQ9BY43 222 aa7.64□□□□□ -1.19
CCDC65-204ENST00000552188 IFT57Q9NWB7 429 aa7.64□□□□□ -1.19
CCDC65-204ENST00000552188 NIP7Q9Y221 180 aaKnown RBP eCLIP7.64□□□□□ -1.19
CCDC65-204ENST00000552188 CACNA1FO60840 1977 aa7.64□□□□□ -1.19
CCDC65-204ENST00000552188 PXDNLA1KZ92 1463 aa7.63□□□□□ -1.19
CCDC65-204ENST00000552188 ELL2O00472 640 aaPredicted RBP7.63□□□□□ -1.19
CCDC65-204ENST00000552188 PPP1R37O75864 691 aa7.63□□□□□ -1.19
CCDC65-204ENST00000552188 YBX3P16989 372 aaKnown RBP eCLIP7.63□□□□□ -1.19
CCDC65-204ENST00000552188 AIMP1Q12904 312 aaKnown RBP7.63□□□□□ -1.19
CCDC65-204ENST00000552188 DALRD3Q5D0E6 543 aaKnown RBP7.63□□□□□ -1.19
CCDC65-204ENST00000552188 HDGFL1Q5TGJ6 251 aa7.63□□□□□ -1.19
CCDC65-204ENST00000552188 TPTE2Q6XPS3 522 aa7.63□□□□□ -1.19
CCDC65-204ENST00000552188 ARHGAP27Q6ZUM4 889 aa7.63□□□□□ -1.19
CCDC65-204ENST00000552188 C2CD5Q86YS7 1000 aa7.63□□□□□ -1.19
CCDC65-204ENST00000552188 ZNF622Q969S3 477 aaKnown RBP eCLIP7.63□□□□□ -1.19
CCDC65-204ENST00000552188 MS4A4AQ96JQ5 239 aa7.63□□□□□ -1.19
CCDC65-204ENST00000552188 ZBTB3Q9H5J0 574 aa7.63□□□□□ -1.19
CCDC65-204ENST00000552188 TSHZ2Q9NRE2 1034 aa7.63□□□□□ -1.19
CCDC65-204ENST00000552188 MBIPQ9NS73 344 aa7.63□□□□□ -1.19
CCDC65-204ENST00000552188 RYDENQ9NUL5 291 aaKnown RBP7.63□□□□□ -1.19
CCDC65-204ENST00000552188 PDZRN3Q9UPQ7 1066 aa7.63□□□□□ -1.19
CCDC65-204ENST00000552188 MAP3K15Q6ZN16 1313 aa7.62□□□□□ -1.19
CCDC65-204ENST00000552188 ERVV-1B6SEH8 477 aa7.62□□□□□ -1.19
CCDC65-204ENST00000552188 ANXA1P04083 346 aa7.62□□□□□ -1.19
CCDC65-204ENST00000552188 HOXB7P09629 217 aa7.62□□□□□ -1.19
CCDC65-204ENST00000552188 CHRNA5P30532 468 aa7.62□□□□□ -1.19
CCDC65-204ENST00000552188 HLFQ16534 295 aa7.62□□□□□ -1.19
CCDC65-204ENST00000552188 KRT24Q2M2I5 525 aa7.62□□□□□ -1.19
CCDC65-204ENST00000552188 DUSP27Q5VZP5 1158 aa7.62□□□□□ -1.19
CCDC65-204ENST00000552188 TTLL7Q6ZT98 887 aa7.62□□□□□ -1.19
CCDC65-204ENST00000552188 CCDC24Q8N4L8 307 aa7.62□□□□□ -1.19
CCDC65-204ENST00000552188 NYXQ9GZU5 481 aa7.62□□□□□ -1.19
CCDC65-204ENST00000552188 SRCAPQ6ZRS2 3230 aa7.62□□□□□ -1.19
CCDC65-204ENST00000552188 ARFGEF2Q9Y6D5 1785 aa7.61□□□□□ -1.19
CCDC65-204ENST00000552188 SEC24BO95487 1268 aa7.61□□□□□ -1.19
CCDC65-204ENST00000552188 GPTP24298 496 aa7.61□□□□□ -1.19
CCDC65-204ENST00000552188 CCDC27Q2M243 656 aa7.61□□□□□ -1.19
CCDC65-204ENST00000552188 HSP90AB3PQ58FF7 597 aa7.61□□□□□ -1.19
CCDC65-204ENST00000552188 PRR5LQ6MZQ0 368 aa7.61□□□□□ -1.19
CCDC65-204ENST00000552188 DPY19L2Q6NUT2 758 aa7.61□□□□□ -1.19
CCDC65-204ENST00000552188 COPS6Q7L5N1 327 aa7.61□□□□□ -1.19
CCDC65-204ENST00000552188 PPP1R42Q7Z4L9 355 aa7.61□□□□□ -1.19
CCDC65-204ENST00000552188 WWC1Q8IX03 1113 aa7.61□□□□□ -1.19
CCDC65-204ENST00000552188 TTLL6Q8N841 843 aa7.61□□□□□ -1.19
CCDC65-204ENST00000552188 BRIP1Q9BX63 1249 aa7.61□□□□□ -1.19
CCDC65-204ENST00000552188 DDX21Q9NR30 783 aaKnown RBP eCLIP7.61□□□□□ -1.19
CCDC65-204ENST00000552188 HYPKQ9NX55 129 aa7.61□□□□□ -1.19
CCDC65-204ENST00000552188 CHPF2Q9P2E5 772 aa7.61□□□□□ -1.19
CCDC65-204ENST00000552188 DBF4Q9UBU7 674 aaPredicted RBP7.61□□□□□ -1.19
CCDC65-204ENST00000552188 SBF1O95248 1867 aa7.61□□□□□ -1.19
CCDC65-204ENST00000552188 COL11A2P13942 1736 aaPredicted RBP7.61□□□□□ -1.19
CCDC65-204ENST00000552188 IRX5P78411 483 aaPredicted RBP7.6□□□□□ -1.19
CCDC65-204ENST00000552188 CCDC30Q5VVM6 783 aa7.6□□□□□ -1.19
CCDC65-204ENST00000552188 GIGYF2Q6Y7W6 1299 aaKnown RBP7.6□□□□□ -1.19
CCDC65-204ENST00000552188 XAGE3Q8WTP9 111 aa7.6□□□□□ -1.19
CCDC65-204ENST00000552188 STK31Q9BXU1 1019 aa7.6□□□□□ -1.19
CCDC65-204ENST00000552188 COLQQ9Y215 455 aaPredicted RBP7.6□□□□□ -1.19
CCDC65-204ENST00000552188 LAMB2P55268 1798 aa7.59□□□□□ -1.19
CCDC65-204ENST00000552188 IL16Q14005 1332 aa7.59□□□□□ -1.19
CCDC65-204ENST00000552188 DDX58O95786 925 aaKnown RBP7.59□□□□□ -1.19
CCDC65-204ENST00000552188 ZNF853P0CG23 659 aa7.59□□□□□ -1.19
CCDC65-204ENST00000552188 PLCG2P16885 1265 aa7.59□□□□□ -1.19
CCDC65-204ENST00000552188 KCNA3P22001 575 aa7.59□□□□□ -1.19
CCDC65-204ENST00000552188 PROSER3Q2NL68 480 aa7.59□□□□□ -1.19
CCDC65-204ENST00000552188 TWISTNBQ3B726 338 aaPredicted RBP7.59□□□□□ -1.19
CCDC65-204ENST00000552188 PARP10Q53GL7 1025 aa7.59□□□□□ -1.19
CCDC65-204ENST00000552188 IER5LQ5T953 404 aa7.59□□□□□ -1.19
CCDC65-204ENST00000552188 DIEXFQ68CQ4 756 aaKnown RBP7.59□□□□□ -1.19
CCDC65-204ENST00000552188 ANKRD13DQ6ZTN6 518 aa7.59□□□□□ -1.19
CCDC65-204ENST00000552188 RIC3Q7Z5B4 369 aa7.59□□□□□ -1.19
CCDC65-204ENST00000552188 WDR63Q8IWG1 891 aa7.59□□□□□ -1.19
CCDC65-204ENST00000552188 SLC39A7Q92504 469 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms