RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 METTL22Q9BUU2 404 aaPredicted RBP20.95■□□□□ 0.94
GCN1-209ENST00000551920 BCL2L13Q9BXK5 485 aa20.95■□□□□ 0.94
GCN1-209ENST00000551920 NYXQ9GZU5 481 aa20.95■□□□□ 0.94
GCN1-209ENST00000551920 FKBP5Q13451 457 aaPredicted RBP20.94■□□□□ 0.94
GCN1-209ENST00000551920 PELP1Q8IZL8 1130 aaKnown RBP20.94■□□□□ 0.94
GCN1-209ENST00000551920 UTP14AQ9BVJ6 771 aaKnown RBP20.94■□□□□ 0.94
GCN1-209ENST00000551920 KLRG2A4D1S0 409 aaPredicted RBP20.93■□□□□ 0.94
GCN1-209ENST00000551920 IGKV5-2P06315 115 aa20.93■□□□□ 0.94
GCN1-209ENST00000551920 PDE6BP35913 854 aa20.93■□□□□ 0.94
GCN1-209ENST00000551920 TRIM28Q13263 835 aaKnown RBP20.93■□□□□ 0.94
GCN1-209ENST00000551920 C3orf67Q6ZVT6 689 aa20.93■□□□□ 0.94
GCN1-209ENST00000551920 PPP1R42Q7Z4L9 355 aa20.93■□□□□ 0.94
GCN1-209ENST00000551920 CACNA1FO60840 1977 aa20.93■□□□□ 0.94
GCN1-209ENST00000551920 CT47B1P0C2W7 299 aaPredicted RBP20.92■□□□□ 0.94
GCN1-209ENST00000551920 GPR162Q16538 588 aa20.92■□□□□ 0.94
GCN1-209ENST00000551920 F6X3S4 739 aa20.91■□□□□ 0.94
GCN1-209ENST00000551920 SRGNP10124 158 aa20.91■□□□□ 0.94
GCN1-209ENST00000551920 GTF2E1P29083 439 aaPredicted RBP20.91■□□□□ 0.94
GCN1-209ENST00000551920 RNF123Q5XPI4 1314 aa20.91■□□□□ 0.94
GCN1-209ENST00000551920 TRMT112Q9UI30 125 aaKnown RBP20.91■□□□□ 0.94
GCN1-209ENST00000551920 H0YIN7 160 aa20.9■□□□□ 0.94
GCN1-209ENST00000551920 CWF19L2Q2TBE0 894 aaKnown RBP20.9■□□□□ 0.94
GCN1-209ENST00000551920 ALDH1L2Q3SY69 923 aa20.9■□□□□ 0.94
GCN1-209ENST00000551920 CRY2Q49AN0 593 aa20.9■□□□□ 0.94
GCN1-209ENST00000551920 DNAAF4Q8WXU2 420 aa20.9■□□□□ 0.94
GCN1-209ENST00000551920 SMC4Q9NTJ3 1288 aa20.9■□□□□ 0.94
GCN1-209ENST00000551920 PIM2Q9P1W9 311 aa20.9■□□□□ 0.94
GCN1-209ENST00000551920 BCS1LQ9Y276 419 aa20.9■□□□□ 0.94
GCN1-209ENST00000551920 DDX60Q8IY21 1712 aaKnown RBP20.9■□□□□ 0.94
GCN1-209ENST00000551920 SH3TC1Q8TE82 1336 aa20.89■□□□□ 0.93
GCN1-209ENST00000551920 RARSP54136 660 aaKnown RBP20.89■□□□□ 0.93
GCN1-209ENST00000551920 FAM89AQ96GI7 184 aa20.89■□□□□ 0.93
GCN1-209ENST00000551920 LAMB2P55268 1798 aa20.88■□□□□ 0.93
GCN1-209ENST00000551920 NEURL1BA8MQ27 555 aa20.88■□□□□ 0.93
GCN1-209ENST00000551920 HCLS1P14317 486 aaPredicted RBP20.88■□□□□ 0.93
GCN1-209ENST00000551920 SLC10A5Q5PT55 438 aa20.88■□□□□ 0.93
GCN1-209ENST00000551920 CCDC191Q8NCU4 936 aa20.88■□□□□ 0.93
GCN1-209ENST00000551920 CWC25Q9NXE8 425 aaPredicted RBP20.88■□□□□ 0.93
GCN1-209ENST00000551920 DALRD3Q5D0E6 543 aaKnown RBP20.87■□□□□ 0.93
GCN1-209ENST00000551920 RTL5Q5HYW3 569 aaPredicted RBP20.87■□□□□ 0.93
GCN1-209ENST00000551920 PDZRN3Q9UPQ7 1066 aa20.87■□□□□ 0.93
GCN1-209ENST00000551920 ARFGEF1Q9Y6D6 1849 aa20.86■□□□□ 0.93
GCN1-209ENST00000551920 NEXNQ0ZGT2 675 aa20.86■□□□□ 0.93
GCN1-209ENST00000551920 STYK1Q6J9G0 422 aa20.86■□□□□ 0.93
GCN1-209ENST00000551920 JARID2Q92833 1246 aaPredicted RBP20.86■□□□□ 0.93
GCN1-209ENST00000551920 ZNF622Q969S3 477 aaKnown RBP eCLIP20.86■□□□□ 0.938e-7■■■□□ 14.9
GCN1-209ENST00000551920 NPR1P16066 1061 aa20.85■□□□□ 0.93
GCN1-209ENST00000551920 BEND3Q5T5X7 828 aa20.85■□□□□ 0.93
GCN1-209ENST00000551920 TTLL6Q8N841 843 aa20.85■□□□□ 0.93
GCN1-209ENST00000551920 ZBTB38Q8NAP3 1195 aaPredicted RBP20.85■□□□□ 0.93
GCN1-209ENST00000551920 LINS1Q8NG48 757 aa20.85■□□□□ 0.93
GCN1-209ENST00000551920 MASTLQ96GX5 879 aa20.85■□□□□ 0.93
GCN1-209ENST00000551920 PTPRCP08575 1304 aa20.84■□□□□ 0.93
GCN1-209ENST00000551920 PCCAP05165 728 aaPredicted RBP20.84■□□□□ 0.93
GCN1-209ENST00000551920 BRPF1P55201 1214 aaPredicted RBP20.84■□□□□ 0.93
GCN1-209ENST00000551920 PRPF40BQ6NWY9 871 aaKnown RBP20.84■□□□□ 0.93
GCN1-209ENST00000551920 COL4A1P02462 1669 aa20.83■□□□□ 0.93
GCN1-209ENST00000551920 SLX4Q8IY92 1834 aa20.83■□□□□ 0.93
GCN1-209ENST00000551920 DCAF8L1A6NGE4 600 aa20.83■□□□□ 0.93
GCN1-209ENST00000551920 IRS4O14654 1257 aaPredicted RBP20.83■□□□□ 0.93
GCN1-209ENST00000551920 GCKRQ14397 625 aa20.83■□□□□ 0.93
GCN1-209ENST00000551920 SLC51AQ86UW1 340 aa20.83■□□□□ 0.93
GCN1-209ENST00000551920 GRIN3BO60391 1043 aa20.82■□□□□ 0.92
GCN1-209ENST00000551920 HOXA10P31260 410 aaPredicted RBP20.82■□□□□ 0.92
GCN1-209ENST00000551920 NLRP3Q96P20 1036 aa20.82■□□□□ 0.92
GCN1-209ENST00000551920 CACNA1SQ13698 1873 aa20.81■□□□□ 0.92
GCN1-209ENST00000551920 BCAR3O75815 825 aa20.81■□□□□ 0.92
GCN1-209ENST00000551920 CASP7P55210 303 aa20.81■□□□□ 0.92
GCN1-209ENST00000551920 SLC4A10Q6U841 1118 aa20.81■□□□□ 0.92
GCN1-209ENST00000551920 CNKSR1Q969H4 720 aa20.81■□□□□ 0.92
GCN1-209ENST00000551920 NOB1Q9ULX3 412 aaKnown RBP20.81■□□□□ 0.92
GCN1-209ENST00000551920 CDHR2Q9BYE9 1310 aa20.8■□□□□ 0.92
GCN1-209ENST00000551920 UBE3BQ7Z3V4 1068 aa20.8■□□□□ 0.92
GCN1-209ENST00000551920 RPGRQ92834 1020 aaKnown RBP20.8■□□□□ 0.92
GCN1-209ENST00000551920 H7C1W4 665 aa20.79■□□□□ 0.92
GCN1-209ENST00000551920 OLFM4Q6UX06 510 aa20.79■□□□□ 0.92
GCN1-209ENST00000551920 C7orf43Q8WVR3 580 aa20.79■□□□□ 0.92
GCN1-209ENST00000551920 YTHDC1Q96MU7 727 aaKnown RBP20.79■□□□□ 0.92
GCN1-209ENST00000551920 ZNF219Q9P2Y4 722 aaPredicted RBP20.79■□□□□ 0.92
GCN1-209ENST00000551920 ABCC4O15439 1325 aa20.78■□□□□ 0.92
GCN1-209ENST00000551920 KIF16BQ96L93 1317 aa20.78■□□□□ 0.92
GCN1-209ENST00000551920 SNED1Q8TER0 1413 aa20.78■□□□□ 0.92
GCN1-209ENST00000551920 C21orf2O43822 256 aa20.78■□□□□ 0.92
GCN1-209ENST00000551920 SF3B3Q15393 1217 aaKnown RBP20.77■□□□□ 0.92
GCN1-209ENST00000551920 CRAMP1Q96RY5 1269 aa20.77■□□□□ 0.92
GCN1-209ENST00000551920 TNNQ9UQP3 1299 aa20.77■□□□□ 0.92
GCN1-209ENST00000551920 NFKBIEO00221 500 aa20.76■□□□□ 0.91
GCN1-209ENST00000551920 ALDH1L1O75891 902 aa20.76■□□□□ 0.91
GCN1-209ENST00000551920 ARHGAP27Q6ZUM4 889 aa20.76■□□□□ 0.91
GCN1-209ENST00000551920 RBM17Q96I25 401 aaKnown RBP20.76■□□□□ 0.91
GCN1-209ENST00000551920 SRCIN1Q9C0H9 1055 aa20.76■□□□□ 0.91
GCN1-209ENST00000551920 PDE8AO60658 829 aa20.75■□□□□ 0.91
GCN1-209ENST00000551920 ALDH1B1P30837 517 aa20.75■□□□□ 0.91
GCN1-209ENST00000551920 CTSWP56202 376 aa20.75■□□□□ 0.91
GCN1-209ENST00000551920 RASSF7Q02833 373 aa20.75■□□□□ 0.91
GCN1-209ENST00000551920 GRM8O00222 908 aa20.74■□□□□ 0.91
GCN1-209ENST00000551920 TRIM27P14373 513 aa20.74■□□□□ 0.91
GCN1-209ENST00000551920 PRELPP51888 382 aa20.74■□□□□ 0.91
GCN1-209ENST00000551920 TAF1P21675 1872 aa20.73■□□□□ 0.91
GCN1-209ENST00000551920 PPEF1O14829 653 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 212.1 ms