RNA–Protein interactions for RNA: ENST00000551594.1

CTDSP2-207, Transcript of CTD small phosphatase 2, humanhuman

TSL 3

Gene CTDSP2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-207ENST00000551594 ANKRD31Q8N7Z5 1873 aa23.9■■□□□ 1.42
CTDSP2-207ENST00000551594 FRAT1Q92837 279 aaPredicted RBP23.89■■□□□ 1.41
CTDSP2-207ENST00000551594 NYXQ9GZU5 481 aa23.89■■□□□ 1.41
CTDSP2-207ENST00000551594 TRMT112Q9UI30 125 aaKnown RBP23.89■■□□□ 1.41
CTDSP2-207ENST00000551594 ST5P78524 1137 aa23.88■■□□□ 1.41
CTDSP2-207ENST00000551594 JARID2Q92833 1246 aaPredicted RBP23.88■■□□□ 1.41
CTDSP2-207ENST00000551594 NEURL1BA8MQ27 555 aa23.87■■□□□ 1.41
CTDSP2-207ENST00000551594 RTL5Q5HYW3 569 aaPredicted RBP23.87■■□□□ 1.41
CTDSP2-207ENST00000551594 BEND3Q5T5X7 828 aa23.87■■□□□ 1.41
CTDSP2-207ENST00000551594 CCDC191Q8NCU4 936 aa23.87■■□□□ 1.41
CTDSP2-207ENST00000551594 CWC25Q9NXE8 425 aaPredicted RBP23.87■■□□□ 1.41
CTDSP2-207ENST00000551594 RCAN3Q9UKA8 241 aa23.87■■□□□ 1.41
CTDSP2-207ENST00000551594 N4BP2Q86UW6 1770 aaPredicted RBP23.87■■□□□ 1.41
CTDSP2-207ENST00000551594 ABCC12Q96J65 1359 aa23.87■■□□□ 1.41
CTDSP2-207ENST00000551594 IBTKQ9P2D0 1353 aaPredicted RBP23.87■■□□□ 1.41
CTDSP2-207ENST00000551594 KIF16BQ96L93 1317 aa23.86■■□□□ 1.41
CTDSP2-207ENST00000551594 LINS1Q8NG48 757 aa23.86■■□□□ 1.41
CTDSP2-207ENST00000551594 FAM89AQ96GI7 184 aa23.86■■□□□ 1.41
CTDSP2-207ENST00000551594 TNNQ9UQP3 1299 aa23.86■■□□□ 1.41
CTDSP2-207ENST00000551594 KIAA1551Q9HCM1 1747 aa23.85■■□□□ 1.41
CTDSP2-207ENST00000551594 A0A0G2JLW4 131 aa23.85■■□□□ 1.41
CTDSP2-207ENST00000551594 CHRNA5P30532 468 aa23.85■■□□□ 1.41
CTDSP2-207ENST00000551594 BRIP1Q9BX63 1249 aa23.85■■□□□ 1.41
CTDSP2-207ENST00000551594 HCLS1P14317 486 aaPredicted RBP23.84■■□□□ 1.41
CTDSP2-207ENST00000551594 DPEP1P16444 411 aa23.84■■□□□ 1.41
CTDSP2-207ENST00000551594 API5Q9BZZ5 524 aaKnown RBP23.84■■□□□ 1.41
CTDSP2-207ENST00000551594 SH3TC1Q8TE82 1336 aa23.84■■□□□ 1.41
CTDSP2-207ENST00000551594 GCKRQ14397 625 aa23.83■■□□□ 1.41
CTDSP2-207ENST00000551594 ARHGAP45Q92619 1136 aa23.83■■□□□ 1.41
CTDSP2-207ENST00000551594 TNRC6CQ9HCJ0 1690 aaKnown RBP23.83■■□□□ 1.4
CTDSP2-207ENST00000551594 PXDNLA1KZ92 1463 aa23.82■■□□□ 1.4
CTDSP2-207ENST00000551594 IPO8O15397 1037 aaKnown RBP23.82■■□□□ 1.4
CTDSP2-207ENST00000551594 TRIM27P14373 513 aa23.82■■□□□ 1.4
CTDSP2-207ENST00000551594 TGFB2P61812 414 aa23.82■■□□□ 1.4
CTDSP2-207ENST00000551594 C3orf67Q6ZVT6 689 aa23.82■■□□□ 1.4
CTDSP2-207ENST00000551594 C2CD5Q86YS7 1000 aa23.82■■□□□ 1.4
CTDSP2-207ENST00000551594 ZBTB38Q8NAP3 1195 aaPredicted RBP23.82■■□□□ 1.4
CTDSP2-207ENST00000551594 SRCIN1Q9C0H9 1055 aa23.82■■□□□ 1.4
CTDSP2-207ENST00000551594 WWC3Q9ULE0 1092 aa23.82■■□□□ 1.4
CTDSP2-207ENST00000551594 PCCAP05165 728 aaPredicted RBP23.81■■□□□ 1.4
CTDSP2-207ENST00000551594 PDE6BP35913 854 aa23.81■■□□□ 1.4
CTDSP2-207ENST00000551594 SLC10A5Q5PT55 438 aa23.81■■□□□ 1.4
CTDSP2-207ENST00000551594 ATF7IPQ6VMQ6 1270 aa23.81■■□□□ 1.4
CTDSP2-207ENST00000551594 RNF123Q5XPI4 1314 aa23.81■■□□□ 1.4
CTDSP2-207ENST00000551594 KCNA3P22001 575 aa23.8■■□□□ 1.4
CTDSP2-207ENST00000551594 ZKSCAN2Q63HK3 967 aa23.8■■□□□ 1.4
CTDSP2-207ENST00000551594 CLUAP1Q96AJ1 413 aa23.8■■□□□ 1.4
CTDSP2-207ENST00000551594 COL11A2P13942 1736 aaPredicted RBP23.79■■□□□ 1.4
CTDSP2-207ENST00000551594 DDX60Q8IY21 1712 aaKnown RBP23.79■■□□□ 1.4
CTDSP2-207ENST00000551594 H0YIN7 160 aa23.79■■□□□ 1.4
CTDSP2-207ENST00000551594 IRS4O14654 1257 aaPredicted RBP23.79■■□□□ 1.4
CTDSP2-207ENST00000551594 ALDH1L1O75891 902 aa23.79■■□□□ 1.4
CTDSP2-207ENST00000551594 KLRG2A4D1S0 409 aaPredicted RBP23.78■■□□□ 1.4
CTDSP2-207ENST00000551594 H7C1W4 665 aa23.78■■□□□ 1.4
CTDSP2-207ENST00000551594 UBE3BQ7Z3V4 1068 aa23.78■■□□□ 1.4
CTDSP2-207ENST00000551594 LAMB2P55268 1798 aa23.78■■□□□ 1.4
CTDSP2-207ENST00000551594 PLIN1O60240 522 aa23.77■■□□□ 1.4
CTDSP2-207ENST00000551594 ABCC4O15439 1325 aa23.77■■□□□ 1.4
CTDSP2-207ENST00000551594 CASP7P55210 303 aa23.76■■□□□ 1.39
CTDSP2-207ENST00000551594 NLRP3Q96P20 1036 aa23.76■■□□□ 1.39
CTDSP2-207ENST00000551594 RIC1Q4ADV7 1423 aa23.76■■□□□ 1.39
CTDSP2-207ENST00000551594 SRGNP10124 158 aa23.75■■□□□ 1.39
CTDSP2-207ENST00000551594 CCT4P50991 539 aaKnown RBP23.75■■□□□ 1.39
CTDSP2-207ENST00000551594 ZNF622Q969S3 477 aaKnown RBP eCLIP23.75■■□□□ 1.39
CTDSP2-207ENST00000551594 C9orf78Q9NZ63 289 aaPredicted RBP23.75■■□□□ 1.39
CTDSP2-207ENST00000551594 GOLGB1Q14789 3259 aaKnown RBP23.75■■□□□ 1.39
CTDSP2-207ENST00000551594 DLEC1Q9Y238 1755 aa23.75■■□□□ 1.39
CTDSP2-207ENST00000551594 BRCA1P38398 1863 aaKnown RBP23.75■■□□□ 1.39
CTDSP2-207ENST00000551594 GRM8O00222 908 aa23.74■■□□□ 1.39
CTDSP2-207ENST00000551594 PELP1Q8IZL8 1130 aaKnown RBP23.74■■□□□ 1.39
CTDSP2-207ENST00000551594 CDHR2Q9BYE9 1310 aa23.74■■□□□ 1.39
CTDSP2-207ENST00000551594 NBPF7P0C2Y1 421 aaPredicted RBP23.73■■□□□ 1.39
CTDSP2-207ENST00000551594 RLBP1P12271 317 aa23.73■■□□□ 1.39
CTDSP2-207ENST00000551594 CRY2Q49AN0 593 aa23.73■■□□□ 1.39
CTDSP2-207ENST00000551594 INTS3Q68E01 1043 aaKnown RBP23.73■■□□□ 1.39
CTDSP2-207ENST00000551594 TMEM57Q8N5G2 664 aa23.73■■□□□ 1.39
CTDSP2-207ENST00000551594 PIM2Q9P1W9 311 aa23.73■■□□□ 1.39
CTDSP2-207ENST00000551594 PDZRN3Q9UPQ7 1066 aa23.73■■□□□ 1.39
CTDSP2-207ENST00000551594 NPR1P16066 1061 aa23.72■■□□□ 1.39
CTDSP2-207ENST00000551594 DZIP1LQ8IYY4 767 aaKnown RBP23.72■■□□□ 1.39
CTDSP2-207ENST00000551594 MASTLQ96GX5 879 aa23.72■■□□□ 1.39
CTDSP2-207ENST00000551594 USP44Q9H0E7 712 aa23.72■■□□□ 1.39
CTDSP2-207ENST00000551594 CACNA1SQ13698 1873 aa23.72■■□□□ 1.39
CTDSP2-207ENST00000551594 PDE8AO60658 829 aa23.71■■□□□ 1.39
CTDSP2-207ENST00000551594 STYK1Q6J9G0 422 aa23.71■■□□□ 1.39
CTDSP2-207ENST00000551594 FTSJ3Q8IY81 847 aaKnown RBP23.71■■□□□ 1.39
CTDSP2-207ENST00000551594 PANK1Q8TE04 598 aa23.71■■□□□ 1.39
CTDSP2-207ENST00000551594 RPGRQ92834 1020 aaKnown RBP23.71■■□□□ 1.39
CTDSP2-207ENST00000551594 CCDC85AQ96PX6 553 aaPredicted RBP23.71■■□□□ 1.39
CTDSP2-207ENST00000551594 TAF1P21675 1872 aa23.7■■□□□ 1.39
CTDSP2-207ENST00000551594 MYH3P11055 1940 aa23.69■■□□□ 1.38
CTDSP2-207ENST00000551594 UTYO14607 1347 aa23.69■■□□□ 1.38
CTDSP2-207ENST00000551594 SLX4Q8IY92 1834 aa23.69■■□□□ 1.38
CTDSP2-207ENST00000551594 YBX3P16989 372 aaKnown RBP eCLIP23.69■■□□□ 1.383e-7■■■□□ 14.7
CTDSP2-207ENST00000551594 SF3B3Q15393 1217 aaKnown RBP23.69■■□□□ 1.38
CTDSP2-207ENST00000551594 DALRD3Q5D0E6 543 aaKnown RBP23.69■■□□□ 1.38
CTDSP2-207ENST00000551594 TTLL6Q8N841 843 aa23.69■■□□□ 1.38
CTDSP2-207ENST00000551594 BCS1LQ9Y276 419 aa23.69■■□□□ 1.38
CTDSP2-207ENST00000551594 HSP90B1P14625 803 aaKnown RBP23.68■■□□□ 1.38
CTDSP2-207ENST00000551594 HOXA10P31260 410 aaPredicted RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms