RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 ZBTB3Q9H5J0 574 aa25.36■■□□□ 1.65
NPAS3-210ENST00000551492 DBF4Q9UBU7 674 aaPredicted RBP25.36■■□□□ 1.65
NPAS3-210ENST00000551492 SLIT2O94813 1529 aa25.36■■□□□ 1.65
NPAS3-210ENST00000551492 ERVV-2B6SEH9 535 aa25.35■■□□□ 1.65
NPAS3-210ENST00000551492 NKX1-1Q15270 411 aaPredicted RBP25.35■■□□□ 1.65
NPAS3-210ENST00000551492 FNBP4Q8N3X1 1017 aaPredicted RBP25.35■■□□□ 1.65
NPAS3-210ENST00000551492 UPF2Q9HAU5 1272 aaKnown RBP25.35■■□□□ 1.65
NPAS3-210ENST00000551492 ERICH4A6NGS2 130 aa25.35■■□□□ 1.65
NPAS3-210ENST00000551492 SLFN14P0C7P3 912 aa25.35■■□□□ 1.65
NPAS3-210ENST00000551492 ARHGAP45Q92619 1136 aa25.35■■□□□ 1.65
NPAS3-210ENST00000551492 BRPF1P55201 1214 aaPredicted RBP25.34■■□□□ 1.65
NPAS3-210ENST00000551492 TULP2O00295 520 aa25.34■■□□□ 1.65
NPAS3-210ENST00000551492 DISP2A7MBM2 1401 aa25.33■■□□□ 1.65
NPAS3-210ENST00000551492 SHANK3Q9BYB0 1731 aa25.33■■□□□ 1.65
NPAS3-210ENST00000551492 RIC3Q7Z5B4 369 aa25.33■■□□□ 1.65
NPAS3-210ENST00000551492 MPNDQ8N594 471 aa25.33■■□□□ 1.65
NPAS3-210ENST00000551492 PDLIM2Q96JY6 352 aa25.32■■□□□ 1.64
NPAS3-210ENST00000551492 LNPKQ9C0E8 428 aa25.32■■□□□ 1.64
NPAS3-210ENST00000551492 RBSNQ9H1K0 784 aa25.32■■□□□ 1.64
NPAS3-210ENST00000551492 PDZRN3Q9UPQ7 1066 aa25.32■■□□□ 1.64
NPAS3-210ENST00000551492 VPS72Q15906 364 aa25.32■■□□□ 1.64
NPAS3-210ENST00000551492 GJD4Q96KN9 370 aaPredicted RBP25.32■■□□□ 1.64
NPAS3-210ENST00000551492 PKD1L3Q7Z443 1732 aa25.31■■□□□ 1.64
NPAS3-210ENST00000551492 DNAAF4Q8WXU2 420 aa25.31■■□□□ 1.64
NPAS3-210ENST00000551492 GEMIN8Q9NWZ8 242 aaKnown RBP25.31■■□□□ 1.64
NPAS3-210ENST00000551492 KIF3AQ9Y496 699 aa25.31■■□□□ 1.64
NPAS3-210ENST00000551492 LRRFIP2Q9Y608 721 aaKnown RBP25.31■■□□□ 1.64
NPAS3-210ENST00000551492 KDM3BQ7LBC6 1761 aa25.31■■□□□ 1.64
NPAS3-210ENST00000551492 ADCY9O60503 1353 aa25.31■■□□□ 1.64
NPAS3-210ENST00000551492 SMARCA5O60264 1052 aaPredicted RBP25.31■■□□□ 1.64
NPAS3-210ENST00000551492 INTS3Q68E01 1043 aaKnown RBP25.31■■□□□ 1.64
NPAS3-210ENST00000551492 TMX1Q9H3N1 280 aa25.31■■□□□ 1.64
NPAS3-210ENST00000551492 BABAM1Q9NWV8 329 aa25.31■■□□□ 1.64
NPAS3-210ENST00000551492 MYD88Q99836 296 aa25.3■■□□□ 1.64
NPAS3-210ENST00000551492 USP44Q9H0E7 712 aa25.3■■□□□ 1.64
NPAS3-210ENST00000551492 PTPRCP08575 1304 aa25.3■■□□□ 1.64
NPAS3-210ENST00000551492 DDX21Q9NR30 783 aaKnown RBP eCLIP25.3■■□□□ 1.64
NPAS3-210ENST00000551492 HEG1Q9ULI3 1381 aa25.29■■□□□ 1.64
NPAS3-210ENST00000551492 TOGARAM1Q9Y4F4 1720 aa25.29■■□□□ 1.64
NPAS3-210ENST00000551492 CCDC66A2RUB6 948 aa25.29■■□□□ 1.64
NPAS3-210ENST00000551492 PARP4Q9UKK3 1724 aaKnown RBP25.29■■□□□ 1.64
NPAS3-210ENST00000551492 SPATA31A6Q5VVP1 1343 aa25.29■■□□□ 1.64
NPAS3-210ENST00000551492 SEPT12Q8IYM1 358 aa25.29■■□□□ 1.64
NPAS3-210ENST00000551492 PNMA6EA0A0J9YXQ4 647 aa25.28■■□□□ 1.64
NPAS3-210ENST00000551492 SKOR2Q2VWA4 1001 aaPredicted RBP25.28■■□□□ 1.64
NPAS3-210ENST00000551492 C5P01031 1676 aa25.28■■□□□ 1.64
NPAS3-210ENST00000551492 C16orf71Q8IYS4 520 aaPredicted RBP25.27■■□□□ 1.64
NPAS3-210ENST00000551492 TBC1D2BQ9UPU7 963 aa25.27■■□□□ 1.64
NPAS3-210ENST00000551492 ANKRD45Q5TZF3 282 aa25.27■■□□□ 1.64
NPAS3-210ENST00000551492 C17orf53Q8N3J3 647 aaPredicted RBP25.27■■□□□ 1.64
NPAS3-210ENST00000551492 RWDD1Q9H446 243 aaPredicted RBP25.27■■□□□ 1.64
NPAS3-210ENST00000551492 ABCC6O95255 1503 aa25.26■■□□□ 1.63
NPAS3-210ENST00000551492 SIPA1L3O60292 1781 aaPredicted RBP25.26■■□□□ 1.63
NPAS3-210ENST00000551492 SRCIN1Q9C0H9 1055 aa25.26■■□□□ 1.63
NPAS3-210ENST00000551492 EXOC6BQ9Y2D4 811 aa25.26■■□□□ 1.63
NPAS3-210ENST00000551492 ZBTB1Q9Y2K1 713 aa25.26■■□□□ 1.63
NPAS3-210ENST00000551492 GTF2F1P35269 517 aaKnown RBP eCLIP25.25■■□□□ 1.63
NPAS3-210ENST00000551492 ATP6V1AP38606 617 aa25.25■■□□□ 1.63
NPAS3-210ENST00000551492 BEND3Q5T5X7 828 aa25.25■■□□□ 1.63
NPAS3-210ENST00000551492 CCDC85AQ96PX6 553 aaPredicted RBP25.25■■□□□ 1.63
NPAS3-210ENST00000551492 FOXD4L1Q9NU39 408 aa25.25■■□□□ 1.63
NPAS3-210ENST00000551492 DDX49Q9Y6V7 483 aaKnown RBP25.25■■□□□ 1.63
NPAS3-210ENST00000551492 ANKRD13DQ6ZTN6 518 aa25.24■■□□□ 1.63
NPAS3-210ENST00000551492 GBP4Q96PP9 640 aa25.24■■□□□ 1.63
NPAS3-210ENST00000551492 NRAPQ86VF7 1730 aa25.24■■□□□ 1.63
NPAS3-210ENST00000551492 SYNE4Q8N205 404 aa25.24■■□□□ 1.63
NPAS3-210ENST00000551492 FEZ2Q9UHY8 353 aaPredicted RBP25.24■■□□□ 1.63
NPAS3-210ENST00000551492 IGKV5-2P06315 115 aa25.23■■□□□ 1.63
NPAS3-210ENST00000551492 GPTP24298 496 aa25.23■■□□□ 1.63
NPAS3-210ENST00000551492 LRP10Q7Z4F1 713 aa25.23■■□□□ 1.63
NPAS3-210ENST00000551492 ZNF622Q969S3 477 aaKnown RBP eCLIP25.23■■□□□ 1.63
NPAS3-210ENST00000551492 KSR2Q6VAB6 950 aa25.23■■□□□ 1.63
NPAS3-210ENST00000551492 OTUD7AQ8TE49 926 aaPredicted RBP25.23■■□□□ 1.63
NPAS3-210ENST00000551492 YY1AP1Q9H869 796 aa25.23■■□□□ 1.63
NPAS3-210ENST00000551492 C9orf78Q9NZ63 289 aaPredicted RBP25.23■■□□□ 1.63
NPAS3-210ENST00000551492 MCM5P33992 734 aa25.22■■□□□ 1.63
NPAS3-210ENST00000551492 ITPK1Q13572 414 aa25.22■■□□□ 1.63
NPAS3-210ENST00000551492 TSHZ3Q63HK5 1081 aa25.22■■□□□ 1.63
NPAS3-210ENST00000551492 BARGINQ6ZT62 677 aa25.22■■□□□ 1.63
NPAS3-210ENST00000551492 KLHDC4Q8TBB5 520 aa25.22■■□□□ 1.63
NPAS3-210ENST00000551492 KIAA2012Q0VF49 1180 aa25.22■■□□□ 1.63
NPAS3-210ENST00000551492 CEP85Q6P2H3 762 aa25.22■■□□□ 1.63
NPAS3-210ENST00000551492 PRIMPOLQ96LW4 560 aa25.22■■□□□ 1.63
NPAS3-210ENST00000551492 HYPKQ9NX55 129 aa25.22■■□□□ 1.63
NPAS3-210ENST00000551492 THRAP3Q9Y2W1 955 aaKnown RBP25.22■■□□□ 1.63
NPAS3-210ENST00000551492 HMGN5P82970 282 aaKnown RBP25.21■■□□□ 1.63
NPAS3-210ENST00000551492 TNS2Q63HR2 1409 aa25.21■■□□□ 1.63
NPAS3-210ENST00000551492 TNNT3P45378 269 aaPredicted RBP25.21■■□□□ 1.63
NPAS3-210ENST00000551492 BCL9O00512 1426 aa25.21■■□□□ 1.63
NPAS3-210ENST00000551492 ITGB4P16144 1822 aa25.2■■□□□ 1.63
NPAS3-210ENST00000551492 CCT4P50991 539 aaKnown RBP25.2■■□□□ 1.62
NPAS3-210ENST00000551492 FAM43BQ6ZT52 329 aaPredicted RBP25.2■■□□□ 1.62
NPAS3-210ENST00000551492 HOXB7P09629 217 aa25.2■■□□□ 1.62
NPAS3-210ENST00000551492 UBTFL1P0CB47 393 aaPredicted RBP25.2■■□□□ 1.62
NPAS3-210ENST00000551492 GABPB1Q06547 395 aaPredicted RBP25.2■■□□□ 1.62
NPAS3-210ENST00000551492 OGFRQ9NZT2 677 aa25.2■■□□□ 1.62
NPAS3-210ENST00000551492 CCDC39Q9UFE4 941 aa25.19■■□□□ 1.62
NPAS3-210ENST00000551492 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.19■■□□□ 1.62
NPAS3-210ENST00000551492 HLFQ16534 295 aa25.19■■□□□ 1.62
NPAS3-210ENST00000551492 PA2G4Q9UQ80 394 aaKnown RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms