RNA–Protein interactions for RNA: ENST00000551219.5

PTPRR-211, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 2,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-211ENST00000551219 UTP14CQ5TAP6 766 aaKnown RBP7.97□□□□□ -1.13
PTPRR-211ENST00000551219 FOXD4L3Q6VB84 417 aaPredicted RBP7.97□□□□□ -1.13
PTPRR-211ENST00000551219 ERC1Q8IUD2 1116 aa7.97□□□□□ -1.13
PTPRR-211ENST00000551219 ZSWIM6Q9HCJ5 1215 aa7.97□□□□□ -1.13
PTPRR-211ENST00000551219 PDRG1Q9NUG6 133 aa7.97□□□□□ -1.13
PTPRR-211ENST00000551219 MTMR6Q9Y217 621 aa7.97□□□□□ -1.13
PTPRR-211ENST00000551219 PIK3C2AO00443 1686 aa7.97□□□□□ -1.13
PTPRR-211ENST00000551219 CASTP20810 708 aaKnown RBP7.96□□□□□ -1.13
PTPRR-211ENST00000551219 PDCP20941 246 aa7.96□□□□□ -1.13
PTPRR-211ENST00000551219 MTX1Q13505 466 aa7.96□□□□□ -1.13
PTPRR-211ENST00000551219 GJB2P29033 226 aa7.96□□□□□ -1.14
PTPRR-211ENST00000551219 FAM69CQ0P6D2 419 aa7.96□□□□□ -1.14
PTPRR-211ENST00000551219 RASEFQ8IZ41 740 aa7.96□□□□□ -1.14
PTPRR-211ENST00000551219 KIAA1524Q8TCG1 905 aa7.96□□□□□ -1.14
PTPRR-211ENST00000551219 TTC12Q9H892 705 aaPredicted RBP7.96□□□□□ -1.14
PTPRR-211ENST00000551219 CHD2O14647 1828 aaKnown RBP7.96□□□□□ -1.14
PTPRR-211ENST00000551219 CEMIPQ8WUJ3 1361 aa7.96□□□□□ -1.14
PTPRR-211ENST00000551219 ZKSCAN1P17029 563 aaPredicted RBP7.95□□□□□ -1.14
PTPRR-211ENST00000551219 KRT85P78386 507 aa7.95□□□□□ -1.14
PTPRR-211ENST00000551219 ANKRD1Q15327 319 aa7.95□□□□□ -1.14
PTPRR-211ENST00000551219 CLASRPQ8N2M8 674 aaKnown RBP7.95□□□□□ -1.14
PTPRR-211ENST00000551219 IL17REQ8NFR9 667 aa7.95□□□□□ -1.14
PTPRR-211ENST00000551219 FAM200AQ8TCP9 573 aa7.95□□□□□ -1.14
PTPRR-211ENST00000551219 EVI5LQ96CN4 794 aa7.95□□□□□ -1.14
PTPRR-211ENST00000551219 PRDM4Q9UKN5 801 aa7.95□□□□□ -1.14
PTPRR-211ENST00000551219 PPP1R37O75864 691 aa7.95□□□□□ -1.14
PTPRR-211ENST00000551219 PSMA5P28066 241 aa7.95□□□□□ -1.14
PTPRR-211ENST00000551219 HOXC9P31274 260 aa7.95□□□□□ -1.14
PTPRR-211ENST00000551219 BEND3Q5T5X7 828 aa7.95□□□□□ -1.14
PTPRR-211ENST00000551219 CCDC83Q8IWF9 413 aa7.95□□□□□ -1.14
PTPRR-211ENST00000551219 DNAAF4Q8WXU2 420 aa7.95□□□□□ -1.14
PTPRR-211ENST00000551219 JAKMIP1Q96N16 626 aaKnown RBP7.95□□□□□ -1.14
PTPRR-211ENST00000551219 ALDH8A1Q9H2A2 487 aaPredicted RBP7.95□□□□□ -1.14
PTPRR-211ENST00000551219 ECHDC1Q9NTX5 307 aa7.95□□□□□ -1.14
PTPRR-211ENST00000551219 SOX12O15370 315 aa7.95□□□□□ -1.14
PTPRR-211ENST00000551219 MAP3K11Q16584 847 aa7.95□□□□□ -1.14
PTPRR-211ENST00000551219 GIMAP6Q6P9H5 292 aa7.95□□□□□ -1.14
PTPRR-211ENST00000551219 CWC27Q6UX04 472 aaKnown RBP7.95□□□□□ -1.14
PTPRR-211ENST00000551219 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.95□□□□□ -1.14
PTPRR-211ENST00000551219 NGDNQ8NEJ9 315 aaKnown RBP7.95□□□□□ -1.14
PTPRR-211ENST00000551219 SNRKQ9NRH2 765 aa7.95□□□□□ -1.14
PTPRR-211ENST00000551219 ALDH1L1O75891 902 aa7.94□□□□□ -1.14
PTPRR-211ENST00000551219 MAP4K4O95819 1239 aaPredicted RBP7.94□□□□□ -1.14
PTPRR-211ENST00000551219 DNM1Q05193 864 aaKnown RBP7.94□□□□□ -1.14
PTPRR-211ENST00000551219 OS9Q13438 667 aaPredicted RBP7.94□□□□□ -1.14
PTPRR-211ENST00000551219 MLECQ14165 292 aa7.94□□□□□ -1.14
PTPRR-211ENST00000551219 ZNF710Q8N1W2 664 aa7.94□□□□□ -1.14
PTPRR-211ENST00000551219 FNBP4Q8N3X1 1017 aaPredicted RBP7.94□□□□□ -1.14
PTPRR-211ENST00000551219 ZNF830Q96NB3 372 aaPredicted RBP7.94□□□□□ -1.14
PTPRR-211ENST00000551219 NUP62CLQ9H1M0 184 aa7.94□□□□□ -1.14
PTPRR-211ENST00000551219 DDX19AQ9NUU7 478 aaKnown RBP7.94□□□□□ -1.14
PTPRR-211ENST00000551219 CAVIN2O95810 425 aa7.94□□□□□ -1.14
PTPRR-211ENST00000551219 NECTIN1Q15223 517 aa7.94□□□□□ -1.14
PTPRR-211ENST00000551219 SYCP1Q15431 976 aa7.94□□□□□ -1.14
PTPRR-211ENST00000551219 ZNF526Q8TF50 670 aaPredicted RBP7.94□□□□□ -1.14
PTPRR-211ENST00000551219 SCAND2PQ9GZW5 306 aaPredicted RBP7.94□□□□□ -1.14
PTPRR-211ENST00000551219 SLIT1O75093 1534 aa7.94□□□□□ -1.14
PTPRR-211ENST00000551219 KDM3BQ7LBC6 1761 aa7.93□□□□□ -1.14
PTPRR-211ENST00000551219 LARGE1O95461 756 aa7.93□□□□□ -1.14
PTPRR-211ENST00000551219 DMTNQ08495 405 aa7.93□□□□□ -1.14
PTPRR-211ENST00000551219 RNF20Q5VTR2 975 aa7.93□□□□□ -1.14
PTPRR-211ENST00000551219 GTPBP4Q9BZE4 634 aaKnown RBP7.93□□□□□ -1.14
PTPRR-211ENST00000551219 PHAXQ9H814 394 aaKnown RBP7.93□□□□□ -1.14
PTPRR-211ENST00000551219 SPG7Q9UQ90 795 aa7.93□□□□□ -1.14
PTPRR-211ENST00000551219 OVOS2A0A0G2JMS6 1433 aa7.93□□□□□ -1.14
PTPRR-211ENST00000551219 VPS37CA5D8V6 355 aaPredicted RBP7.93□□□□□ -1.14
PTPRR-211ENST00000551219 IFIT2P09913 472 aaKnown RBP7.93□□□□□ -1.14
PTPRR-211ENST00000551219 EIF4A1P60842 406 aaKnown RBP7.93□□□□□ -1.14
PTPRR-211ENST00000551219 PRPF40BQ6NWY9 871 aaKnown RBP7.93□□□□□ -1.14
PTPRR-211ENST00000551219 TMED8Q6PL24 325 aaPredicted RBP7.93□□□□□ -1.14
PTPRR-211ENST00000551219 CERS3Q8IU89 383 aa7.93□□□□□ -1.14
PTPRR-211ENST00000551219 KCNF1Q9H3M0 494 aa7.93□□□□□ -1.14
PTPRR-211ENST00000551219 CTIFO43310 598 aaKnown RBP7.92□□□□□ -1.14
PTPRR-211ENST00000551219 TYRO3Q06418 890 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 RBM43Q6ZSC3 357 aaKnown RBP7.92□□□□□ -1.14
PTPRR-211ENST00000551219 PARP9Q8IXQ6 854 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 ANKRD7Q92527 254 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 BCL2L12Q9HB09 334 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 SERPINA10Q9UK55 444 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 NCAPD2Q15021 1401 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 NPHP3Q7Z494 1330 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 NBPF7P0C2Y1 421 aaPredicted RBP7.92□□□□□ -1.14
PTPRR-211ENST00000551219 NLRP6P59044 892 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 PTH1RQ03431 593 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 ME3Q16798 604 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 LARP1BQ659C4 914 aaKnown RBP7.92□□□□□ -1.14
PTPRR-211ENST00000551219 CREB3L3Q68CJ9 461 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 ZNF592Q92610 1267 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 HMG20BQ9P0W2 317 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 TBX22Q9Y458 520 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 EID1Q9Y6B2 187 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 MARF1Q9Y4F3 1742 aaKnown RBP7.92□□□□□ -1.14
PTPRR-211ENST00000551219 ARHGAP23Q9P227 1491 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 ADCY9O60503 1353 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 NUTM2FA1L443 756 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 GIGYF1O75420 1035 aaPredicted RBP7.92□□□□□ -1.14
PTPRR-211ENST00000551219 CDC25BP30305 580 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 ST3GAL1Q11201 340 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 PDCL2Q8N4E4 241 aa7.92□□□□□ -1.14
PTPRR-211ENST00000551219 MAP4K1Q92918 833 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms