RNA–Protein interactions for RNA: ENST00000551176.1

ERBB3-218, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 277 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-218ENST00000551176 OLFM4Q6UX06 510 aa9.86□□□□□ -0.83
ERBB3-218ENST00000551176 ANKRD13DQ6ZTN6 518 aa9.86□□□□□ -0.83
ERBB3-218ENST00000551176 ZNF526Q8TF50 670 aaPredicted RBP9.86□□□□□ -0.83
ERBB3-218ENST00000551176 NYXQ9GZU5 481 aa9.86□□□□□ -0.83
ERBB3-218ENST00000551176 PDZRN3Q9UPQ7 1066 aa9.86□□□□□ -0.83
ERBB3-218ENST00000551176 RIC1Q4ADV7 1423 aa9.85□□□□□ -0.83
ERBB3-218ENST00000551176 ATP5J2-PTCD1G3V325 749 aa9.85□□□□□ -0.83
ERBB3-218ENST00000551176 NPR1P16066 1061 aa9.85□□□□□ -0.83
ERBB3-218ENST00000551176 GTF2E1P29083 439 aaPredicted RBP9.85□□□□□ -0.83
ERBB3-218ENST00000551176 TWISTNBQ3B726 338 aaPredicted RBP9.85□□□□□ -0.83
ERBB3-218ENST00000551176 CCDC30Q5VVM6 783 aa9.85□□□□□ -0.83
ERBB3-218ENST00000551176 CNKSR1Q969H4 720 aa9.85□□□□□ -0.83
ERBB3-218ENST00000551176 ISCA1Q9BUE6 129 aa9.85□□□□□ -0.83
ERBB3-218ENST00000551176 UTP14AQ9BVJ6 771 aaKnown RBP9.85□□□□□ -0.83
ERBB3-218ENST00000551176 CCER2I3L3R5 266 aa9.84□□□□□ -0.83
ERBB3-218ENST00000551176 HCLS1P14317 486 aaPredicted RBP9.84□□□□□ -0.83
ERBB3-218ENST00000551176 HOXA10P31260 410 aaPredicted RBP9.84□□□□□ -0.83
ERBB3-218ENST00000551176 EXOSC9Q06265 439 aaKnown RBP9.84□□□□□ -0.83
ERBB3-218ENST00000551176 HSP90AB3PQ58FF7 597 aa9.84□□□□□ -0.83
ERBB3-218ENST00000551176 SLC10A5Q5PT55 438 aa9.84□□□□□ -0.83
ERBB3-218ENST00000551176 G2E3Q7L622 706 aa9.84□□□□□ -0.83
ERBB3-218ENST00000551176 PPP1R42Q7Z4L9 355 aa9.84□□□□□ -0.83
ERBB3-218ENST00000551176 RNF181Q9P0P0 153 aa9.84□□□□□ -0.83
ERBB3-218ENST00000551176 ARFGEF1Q9Y6D6 1849 aa9.84□□□□□ -0.83
ERBB3-218ENST00000551176 VAMP4O75379 141 aa9.83□□□□□ -0.84
ERBB3-218ENST00000551176 MIER1Q8N108 512 aa9.83□□□□□ -0.84
ERBB3-218ENST00000551176 TRMT112Q9UI30 125 aaKnown RBP9.83□□□□□ -0.84
ERBB3-218ENST00000551176 NUP98P52948 1817 aa9.83□□□□□ -0.84
ERBB3-218ENST00000551176 CHD4Q14839 1912 aa9.83□□□□□ -0.84
ERBB3-218ENST00000551176 SNED1Q8TER0 1413 aa9.82□□□□□ -0.84
ERBB3-218ENST00000551176 LMNB1P20700 586 aa9.82□□□□□ -0.84
ERBB3-218ENST00000551176 GOLGA2Q08379 1002 aa9.82□□□□□ -0.84
ERBB3-218ENST00000551176 TRIM28Q13263 835 aaKnown RBP9.82□□□□□ -0.84
ERBB3-218ENST00000551176 RIC3Q7Z5B4 369 aa9.82□□□□□ -0.84
ERBB3-218ENST00000551176 FAM89AQ96GI7 184 aa9.82□□□□□ -0.84
ERBB3-218ENST00000551176 MYD88Q99836 296 aa9.82□□□□□ -0.84
ERBB3-218ENST00000551176 SLX4Q8IY92 1834 aa9.82□□□□□ -0.84
ERBB3-218ENST00000551176 RNF123Q5XPI4 1314 aa9.82□□□□□ -0.84
ERBB3-218ENST00000551176 SH3TC1Q8TE82 1336 aa9.82□□□□□ -0.84
ERBB3-218ENST00000551176 PI4KAP2A4QPH2 592 aa9.81□□□□□ -0.84
ERBB3-218ENST00000551176 SLC4A2P04920 1241 aa9.81□□□□□ -0.84
ERBB3-218ENST00000551176 RTL5Q5HYW3 569 aaPredicted RBP9.81□□□□□ -0.84
ERBB3-218ENST00000551176 DIEXFQ68CQ4 756 aaKnown RBP9.81□□□□□ -0.84
ERBB3-218ENST00000551176 POTEDQ86YR6 584 aa9.81□□□□□ -0.84
ERBB3-218ENST00000551176 PI4KAP1Q8N8J0 262 aa9.81□□□□□ -0.84
ERBB3-218ENST00000551176 RPGRQ92834 1020 aaKnown RBP9.81□□□□□ -0.84
ERBB3-218ENST00000551176 GPBP1L1Q9HC44 474 aaPredicted RBP9.81□□□□□ -0.84
ERBB3-218ENST00000551176 MAP3K2Q9Y2U5 619 aa9.81□□□□□ -0.84
ERBB3-218ENST00000551176 LTBP3Q9NS15 1303 aa9.81□□□□□ -0.84
ERBB3-218ENST00000551176 KIF3CO14782 793 aa9.8□□□□□ -0.84
ERBB3-218ENST00000551176 IGKV5-2P06315 115 aa9.8□□□□□ -0.84
ERBB3-218ENST00000551176 ALDH1B1P30837 517 aa9.8□□□□□ -0.84
ERBB3-218ENST00000551176 CCDC93Q567U6 631 aa9.8□□□□□ -0.84
ERBB3-218ENST00000551176 KSR2Q6VAB6 950 aa9.8□□□□□ -0.84
ERBB3-218ENST00000551176 JARID2Q92833 1246 aaPredicted RBP9.8□□□□□ -0.84
ERBB3-218ENST00000551176 CDCA7LQ96GN5 454 aa9.8□□□□□ -0.84
ERBB3-218ENST00000551176 NLRP3Q96P20 1036 aa9.8□□□□□ -0.84
ERBB3-218ENST00000551176 CRAMP1Q96RY5 1269 aa9.8□□□□□ -0.84
ERBB3-218ENST00000551176 METTL22Q9BUU2 404 aaPredicted RBP9.8□□□□□ -0.84
ERBB3-218ENST00000551176 STK31Q9BXU1 1019 aa9.8□□□□□ -0.84
ERBB3-218ENST00000551176 TAOK3Q9H2K8 898 aa9.8□□□□□ -0.84
ERBB3-218ENST00000551176 MYH16Q9H6N6 1097 aa9.8□□□□□ -0.84
ERBB3-218ENST00000551176 NMRK2Q9NPI5 230 aa9.8□□□□□ -0.84
ERBB3-218ENST00000551176 ABCC4O15439 1325 aa9.8□□□□□ -0.84
ERBB3-218ENST00000551176 ANKRD36CQ5JPF3 1778 aa9.79□□□□□ -0.84
ERBB3-218ENST00000551176 ARFGEF2Q9Y6D5 1785 aa9.79□□□□□ -0.84
ERBB3-218ENST00000551176 PPEF1O14829 653 aaPredicted RBP9.79□□□□□ -0.84
ERBB3-218ENST00000551176 DDX58O95786 925 aaKnown RBP9.79□□□□□ -0.84
ERBB3-218ENST00000551176 FLIIQ13045 1269 aa9.79□□□□□ -0.84
ERBB3-218ENST00000551176 SOGA3Q5TF21 947 aa9.79□□□□□ -0.84
ERBB3-218ENST00000551176 ZBTB38Q8NAP3 1195 aaPredicted RBP9.79□□□□□ -0.84
ERBB3-218ENST00000551176 RBM17Q96I25 401 aaKnown RBP9.79□□□□□ -0.84
ERBB3-218ENST00000551176 CHMP4AQ9BY43 222 aa9.79□□□□□ -0.84
ERBB3-218ENST00000551176 ZNF277Q9NRM2 450 aaPredicted RBP9.79□□□□□ -0.84
ERBB3-218ENST00000551176 COL4A1P02462 1669 aa9.79□□□□□ -0.84
ERBB3-218ENST00000551176 IRS4O14654 1257 aaPredicted RBP9.78□□□□□ -0.84
ERBB3-218ENST00000551176 C1QTNF8P60827 252 aa9.78□□□□□ -0.84
ERBB3-218ENST00000551176 FKBP4Q02790 459 aaKnown RBP eCLIP9.78□□□□□ -0.84
ERBB3-218ENST00000551176 SLFN5Q08AF3 891 aa9.78□□□□□ -0.84
ERBB3-218ENST00000551176 CWF19L2Q2TBE0 894 aaKnown RBP9.78□□□□□ -0.84
ERBB3-218ENST00000551176 CCDC191Q8NCU4 936 aa9.78□□□□□ -0.84
ERBB3-218ENST00000551176 CWC25Q9NXE8 425 aaPredicted RBP9.78□□□□□ -0.84
ERBB3-218ENST00000551176 NEURL1BA8MQ27 555 aa9.77□□□□□ -0.85
ERBB3-218ENST00000551176 PCCAP05165 728 aaPredicted RBP9.77□□□□□ -0.85
ERBB3-218ENST00000551176 SF3B3Q15393 1217 aaKnown RBP9.77□□□□□ -0.85
ERBB3-218ENST00000551176 TRMT2AQ8IZ69 625 aaKnown RBP9.77□□□□□ -0.85
ERBB3-218ENST00000551176 RTKN2Q8IZC4 609 aa9.77□□□□□ -0.85
ERBB3-218ENST00000551176 ATP6V0A2Q9Y487 856 aa9.77□□□□□ -0.85
ERBB3-218ENST00000551176 ZC3H4Q9UPT8 1303 aaKnown RBP9.77□□□□□ -0.85
ERBB3-218ENST00000551176 COL4A5P29400 1685 aa9.77□□□□□ -0.85
ERBB3-218ENST00000551176 GLTPD2A6NH11 291 aa9.76□□□□□ -0.85
ERBB3-218ENST00000551176 E9PSI1 815 aa9.76□□□□□ -0.85
ERBB3-218ENST00000551176 F6X3S4 739 aa9.76□□□□□ -0.85
ERBB3-218ENST00000551176 FKBP5Q13451 457 aaPredicted RBP9.76□□□□□ -0.85
ERBB3-218ENST00000551176 GRAPQ13588 217 aa9.76□□□□□ -0.85
ERBB3-218ENST00000551176 GRAPLQ8TC17 118 aaPredicted RBP9.76□□□□□ -0.85
ERBB3-218ENST00000551176 CELF1Q92879 486 aaKnown RBP9.76□□□□□ -0.85
ERBB3-218ENST00000551176 PSMD1Q99460 953 aa9.76□□□□□ -0.85
ERBB3-218ENST00000551176 RRAGCQ9HB90 399 aa9.76□□□□□ -0.85
ERBB3-218ENST00000551176 FER1L6Q2WGJ9 1857 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms