RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 IFIT3O14879 490 aaKnown RBP13.71□□□□□ -0.21
LGR5-206ENST00000550851 CPA1P15085 419 aa13.71□□□□□ -0.21
LGR5-206ENST00000550851 IL15P40933 162 aaPredicted RBP13.71□□□□□ -0.21
LGR5-206ENST00000550851 PRIM1P49642 420 aaKnown RBP13.71□□□□□ -0.21
LGR5-206ENST00000550851 MICU3Q86XE3 530 aa13.71□□□□□ -0.21
LGR5-206ENST00000550851 GJB2P29033 226 aa13.71□□□□□ -0.21
LGR5-206ENST00000550851 MKNK2Q9HBH9 465 aa13.71□□□□□ -0.21
LGR5-206ENST00000550851 POLR3DP05423 398 aaPredicted RBP13.71□□□□□ -0.22
LGR5-206ENST00000550851 NMIQ13287 307 aaPredicted RBP13.71□□□□□ -0.22
LGR5-206ENST00000550851 NUP62CLQ9H1M0 184 aa13.71□□□□□ -0.22
LGR5-206ENST00000550851 IRS4O14654 1257 aaPredicted RBP13.7□□□□□ -0.22
LGR5-206ENST00000550851 CDKL5O76039 1030 aa13.7□□□□□ -0.22
LGR5-206ENST00000550851 BAG4O95429 457 aaKnown RBP13.7□□□□□ -0.22
LGR5-206ENST00000550851 ZNF594Q96JF6 807 aaPredicted RBP13.7□□□□□ -0.22
LGR5-206ENST00000550851 WWC3Q9ULE0 1092 aa13.7□□□□□ -0.22
LGR5-206ENST00000550851 ZNF521Q96K83 1311 aa13.7□□□□□ -0.22
LGR5-206ENST00000550851 CHST3Q7LGC8 479 aa13.7□□□□□ -0.22
LGR5-206ENST00000550851 C8orf76Q96K31 380 aa13.7□□□□□ -0.22
LGR5-206ENST00000550851 CCDC43Q96MW1 224 aaKnown RBP13.7□□□□□ -0.22
LGR5-206ENST00000550851 TPM2P07951 284 aa13.7□□□□□ -0.22
LGR5-206ENST00000550851 SLC9C2Q5TAH2 1124 aa13.7□□□□□ -0.22
LGR5-206ENST00000550851 PLEKHG1Q9ULL1 1385 aa13.7□□□□□ -0.22
LGR5-206ENST00000550851 CHMLP26374 656 aa13.69□□□□□ -0.22
LGR5-206ENST00000550851 STX6O43752 255 aa13.69□□□□□ -0.22
LGR5-206ENST00000550851 HCLS1P14317 486 aaPredicted RBP13.69□□□□□ -0.22
LGR5-206ENST00000550851 CCDC152Q4G0S7 254 aa13.69□□□□□ -0.22
LGR5-206ENST00000550851 SETDB2Q96T68 719 aa13.69□□□□□ -0.22
LGR5-206ENST00000550851 GIGYF1O75420 1035 aaPredicted RBP13.69□□□□□ -0.22
LGR5-206ENST00000550851 LETM1O95202 739 aaPredicted RBP13.69□□□□□ -0.22
LGR5-206ENST00000550851 TRMT2AQ8IZ69 625 aaKnown RBP13.69□□□□□ -0.22
LGR5-206ENST00000550851 ZGPATQ8N5A5 531 aaKnown RBP13.69□□□□□ -0.22
LGR5-206ENST00000550851 USP44Q9H0E7 712 aa13.69□□□□□ -0.22
LGR5-206ENST00000550851 IPO7O95373 1038 aaKnown RBP13.69□□□□□ -0.22
LGR5-206ENST00000550851 SUCLG2Q96I99 432 aa13.69□□□□□ -0.22
LGR5-206ENST00000550851 FAM13BQ9NYF5 915 aa13.69□□□□□ -0.22
LGR5-206ENST00000550851 JAG2Q9Y219 1238 aa13.69□□□□□ -0.22
LGR5-206ENST00000550851 PLXNC1O60486 1568 aa13.69□□□□□ -0.22
LGR5-206ENST00000550851 CFAP74Q9C0B2 1584 aa13.69□□□□□ -0.22
LGR5-206ENST00000550851 CCDC24Q8N4L8 307 aa13.68□□□□□ -0.22
LGR5-206ENST00000550851 R3HCC1Q9Y3T6 440 aaKnown RBP13.68□□□□□ -0.22
LGR5-206ENST00000550851 KIF1BO60333 1816 aa13.68□□□□□ -0.22
LGR5-206ENST00000550851 CKAP2LQ8IYA6 745 aa13.68□□□□□ -0.22
LGR5-206ENST00000550851 NLRP3Q96P20 1036 aa13.68□□□□□ -0.22
LGR5-206ENST00000550851 DBNDD2Q9BQY9 259 aa13.68□□□□□ -0.22
LGR5-206ENST00000550851 HMGB1P09429 215 aaKnown RBP13.68□□□□□ -0.22
LGR5-206ENST00000550851 ANKRD18AQ8IVF6 992 aa13.68□□□□□ -0.22
LGR5-206ENST00000550851 METTL22Q9BUU2 404 aaPredicted RBP13.68□□□□□ -0.22
LGR5-206ENST00000550851 RBM27Q9P2N5 1060 aaKnown RBP13.68□□□□□ -0.22
LGR5-206ENST00000550851 SLC12A7Q9Y666 1083 aa13.68□□□□□ -0.22
LGR5-206ENST00000550851 PAG1Q9NWQ8 432 aa13.67□□□□□ -0.22
LGR5-206ENST00000550851 CDC42BPBQ9Y5S2 1711 aa13.67□□□□□ -0.22
LGR5-206ENST00000550851 MPHOSPH10O00566 681 aaKnown RBP13.67□□□□□ -0.22
LGR5-206ENST00000550851 FAM98CQ17RN3 349 aaKnown RBP13.67□□□□□ -0.22
LGR5-206ENST00000550851 SOGA3Q5TF21 947 aa13.67□□□□□ -0.22
LGR5-206ENST00000550851 IQCA1Q86XH1 822 aa13.67□□□□□ -0.22
LGR5-206ENST00000550851 INSRP06213 1382 aa13.67□□□□□ -0.22
LGR5-206ENST00000550851 TXLNAP40222 546 aa13.67□□□□□ -0.22
LGR5-206ENST00000550851 MCMDC2Q4G0Z9 681 aa13.67□□□□□ -0.22
LGR5-206ENST00000550851 FILIP1Q7Z7B0 1213 aa13.67□□□□□ -0.22
LGR5-206ENST00000550851 ARHGEF25Q86VW2 580 aa13.67□□□□□ -0.22
LGR5-206ENST00000550851 NOC3LQ8WTT2 800 aaKnown RBP13.67□□□□□ -0.22
LGR5-206ENST00000550851 CLTCL1P53675 1640 aa13.66□□□□□ -0.22
LGR5-206ENST00000550851 PRAMEF22A3QJZ6 481 aa13.66□□□□□ -0.22
LGR5-206ENST00000550851 TTLL5Q6EMB2 1281 aa13.66□□□□□ -0.22
LGR5-206ENST00000550851 ORC3Q9UBD5 711 aaPredicted RBP13.66□□□□□ -0.22
LGR5-206ENST00000550851 HOXB7P09629 217 aa13.66□□□□□ -0.22
LGR5-206ENST00000550851 PLBD2Q8NHP8 589 aa13.66□□□□□ -0.22
LGR5-206ENST00000550851 USP26Q9BXU7 913 aa13.66□□□□□ -0.22
LGR5-206ENST00000550851 CCDC39Q9UFE4 941 aa13.66□□□□□ -0.22
LGR5-206ENST00000550851 SETD1BQ9UPS6 1966 aaKnown RBP13.66□□□□□ -0.22
LGR5-206ENST00000550851 ARHGEF10O15013 1369 aa13.66□□□□□ -0.22
LGR5-206ENST00000550851 USP6P35125 1406 aa13.66□□□□□ -0.22
LGR5-206ENST00000550851 BCORL1Q5H9F3 1711 aa13.66□□□□□ -0.22
LGR5-206ENST00000550851 GOLGA8AA7E2F4 631 aa13.66□□□□□ -0.22
LGR5-206ENST00000550851 GCKRQ14397 625 aa13.66□□□□□ -0.22
LGR5-206ENST00000550851 PROSER3Q2NL68 480 aa13.66□□□□□ -0.22
LGR5-206ENST00000550851 TMEM67Q5HYA8 995 aa13.66□□□□□ -0.22
LGR5-206ENST00000550851 CDK5RAP3Q96JB5 506 aa13.66□□□□□ -0.22
LGR5-206ENST00000550851 UTP14AQ9BVJ6 771 aaKnown RBP13.66□□□□□ -0.22
LGR5-206ENST00000550851 NLRP1Q9C000 1473 aa13.66□□□□□ -0.22
LGR5-206ENST00000550851 TTF1Q15361 905 aaPredicted RBP13.65□□□□□ -0.22
LGR5-206ENST00000550851 ZHX3Q9H4I2 956 aa13.65□□□□□ -0.22
LGR5-206ENST00000550851 ADCY10Q96PN6 1610 aa13.65□□□□□ -0.22
LGR5-206ENST00000550851 PHKG2P15735 406 aa13.65□□□□□ -0.22
LGR5-206ENST00000550851 SMARCC1Q92922 1105 aaPredicted RBP13.65□□□□□ -0.22
LGR5-206ENST00000550851 ZNF622Q969S3 477 aaKnown RBP eCLIP13.65□□□□□ -0.22
LGR5-206ENST00000550851 EDC3Q96F86 508 aaKnown RBP13.65□□□□□ -0.22
LGR5-206ENST00000550851 SCAND2PQ9GZW5 306 aaPredicted RBP13.65□□□□□ -0.22
LGR5-206ENST00000550851 BABAM1Q9NWV8 329 aa13.65□□□□□ -0.22
LGR5-206ENST00000550851 KLF18A0A0U1RQI7 1052 aa13.65□□□□□ -0.22
LGR5-206ENST00000550851 SERPINC1P01008 464 aa13.65□□□□□ -0.22
LGR5-206ENST00000550851 SSBP05455 408 aaKnown RBP eCLIP13.65□□□□□ -0.22
LGR5-206ENST00000550851 CYP7A1P22680 504 aa13.65□□□□□ -0.22
LGR5-206ENST00000550851 CCDC173Q0VFZ6 552 aa13.65□□□□□ -0.22
LGR5-206ENST00000550851 MAP3K11Q16584 847 aa13.65□□□□□ -0.22
LGR5-206ENST00000550851 CCDC129Q6ZRS4 1044 aa13.65□□□□□ -0.22
LGR5-206ENST00000550851 CTCFLQ8NI51 663 aaPredicted RBP13.65□□□□□ -0.22
LGR5-206ENST00000550851 PANK2Q9BZ23 570 aa13.65□□□□□ -0.22
LGR5-206ENST00000550851 TET3O43151 1660 aa13.65□□□□□ -0.22
LGR5-206ENST00000550851 MIGA1Q8NAN2 632 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms