RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ACDQ96AP0 544 aa8.66□□□□□ -1.02
SCAF11-213ENST00000550629 SLC4A9Q96Q91 983 aa8.66□□□□□ -1.02
SCAF11-213ENST00000550629 MLH3Q9UHC1 1453 aa8.65□□□□□ -1.02
SCAF11-213ENST00000550629 RTEL1-TNFRSF6BF6WH68 1400 aa8.65□□□□□ -1.02
SCAF11-213ENST00000550629 ABCC5O15440 1437 aa8.65□□□□□ -1.02
SCAF11-213ENST00000550629 DAPK1P53355 1430 aa8.65□□□□□ -1.02
SCAF11-213ENST00000550629 TRAPPC8Q9Y2L5 1435 aa8.65□□□□□ -1.02
SCAF11-213ENST00000550629 CNTNAP5Q8WYK1 1306 aa8.65□□□□□ -1.02
SCAF11-213ENST00000550629 HNRNPMP52272 730 aaKnown RBP eCLIP8.65□□□□□ -1.02
SCAF11-213ENST00000550629 PSME1Q06323 249 aa8.65□□□□□ -1.02
SCAF11-213ENST00000550629 FAM50AQ14320 339 aaKnown RBP8.65□□□□□ -1.02
SCAF11-213ENST00000550629 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.65□□□□□ -1.02
SCAF11-213ENST00000550629 RHBDD1Q8TEB9 315 aa8.65□□□□□ -1.02
SCAF11-213ENST00000550629 RICTORQ6R327 1708 aa8.65□□□□□ -1.03
SCAF11-213ENST00000550629 KDM6BO15054 1643 aa8.65□□□□□ -1.03
SCAF11-213ENST00000550629 FRMPD1Q5SYB0 1578 aa8.65□□□□□ -1.03
SCAF11-213ENST00000550629 MAST1Q9Y2H9 1570 aa8.65□□□□□ -1.03
SCAF11-213ENST00000550629 COL17A1Q9UMD9 1497 aaPredicted RBP8.64□□□□□ -1.03
SCAF11-213ENST00000550629 ZBTB7BO15156 539 aaPredicted RBP8.64□□□□□ -1.03
SCAF11-213ENST00000550629 TSPY4P0CV99 314 aa8.64□□□□□ -1.03
SCAF11-213ENST00000550629 TSPY10P0CW01 314 aa8.64□□□□□ -1.03
SCAF11-213ENST00000550629 TRIM50Q86XT4 487 aa8.64□□□□□ -1.03
SCAF11-213ENST00000550629 DCAF5Q96JK2 942 aa8.64□□□□□ -1.03
SCAF11-213ENST00000550629 GPAMQ9HCL2 828 aa8.64□□□□□ -1.03
SCAF11-213ENST00000550629 MKRN1Q9UHC7 482 aaKnown RBP8.64□□□□□ -1.03
SCAF11-213ENST00000550629 KIAA1024Q9UPX6 916 aa8.64□□□□□ -1.03
SCAF11-213ENST00000550629 ROCK1Q13464 1354 aa8.63□□□□□ -1.03
SCAF11-213ENST00000550629 CROCC2H7BZ55 1655 aa8.63□□□□□ -1.03
SCAF11-213ENST00000550629 SPAG9O60271 1321 aaKnown RBP8.63□□□□□ -1.03
SCAF11-213ENST00000550629 PALM3A6NDB9 673 aaPredicted RBP8.63□□□□□ -1.03
SCAF11-213ENST00000550629 A6NJY4 79 aa8.63□□□□□ -1.03
SCAF11-213ENST00000550629 MSTNO14793 375 aa8.63□□□□□ -1.03
SCAF11-213ENST00000550629 RAPGEF3O95398 923 aa8.63□□□□□ -1.03
SCAF11-213ENST00000550629 CLDN10P78369 228 aa8.63□□□□□ -1.03
SCAF11-213ENST00000550629 MTFR1Q15390 333 aa8.63□□□□□ -1.03
SCAF11-213ENST00000550629 PLA2G4EQ3MJ16 856 aa8.63□□□□□ -1.03
SCAF11-213ENST00000550629 AFAP1Q8N556 730 aa8.63□□□□□ -1.03
SCAF11-213ENST00000550629 ZNF358Q9NW07 568 aa8.63□□□□□ -1.03
SCAF11-213ENST00000550629 MAFBQ9Y5Q3 323 aaPredicted RBP8.63□□□□□ -1.03
SCAF11-213ENST00000550629 INO80Q9ULG1 1556 aaPredicted RBP8.63□□□□□ -1.03
SCAF11-213ENST00000550629 ADGRL2O95490 1459 aa8.63□□□□□ -1.03
SCAF11-213ENST00000550629 C9orf84Q5VXU9 1444 aa8.63□□□□□ -1.03
SCAF11-213ENST00000550629 HECW2Q9P2P5 1572 aa8.62□□□□□ -1.03
SCAF11-213ENST00000550629 A0A1B0GTH6 734 aa8.62□□□□□ -1.03
SCAF11-213ENST00000550629 BACH1O14867 736 aa8.62□□□□□ -1.03
SCAF11-213ENST00000550629 MAP2K3P46734 347 aa8.62□□□□□ -1.03
SCAF11-213ENST00000550629 ATP1A2P50993 1020 aa8.62□□□□□ -1.03
SCAF11-213ENST00000550629 TRIM26Q12899 539 aaPredicted RBP8.62□□□□□ -1.03
SCAF11-213ENST00000550629 PPP1R12CQ9BZL4 782 aa8.62□□□□□ -1.03
SCAF11-213ENST00000550629 LRRC4BQ9NT99 713 aa8.62□□□□□ -1.03
SCAF11-213ENST00000550629 DNAAF2Q9NVR5 837 aaKnown RBP8.62□□□□□ -1.03
SCAF11-213ENST00000550629 IQSEC3Q9UPP2 1182 aaPredicted RBP8.62□□□□□ -1.03
SCAF11-213ENST00000550629 PHF24Q9UPV7 400 aa8.62□□□□□ -1.03
SCAF11-213ENST00000550629 GTF3C3Q9Y5Q9 886 aa8.62□□□□□ -1.03
SCAF11-213ENST00000550629 USP3Q9Y6I4 520 aa8.62□□□□□ -1.03
SCAF11-213ENST00000550629 ZFYVE16Q7Z3T8 1539 aa8.62□□□□□ -1.03
SCAF11-213ENST00000550629 PLXNC1O60486 1568 aa8.61□□□□□ -1.03
SCAF11-213ENST00000550629 ATP7AQ04656 1500 aa8.61□□□□□ -1.03
SCAF11-213ENST00000550629 CDK2AP1O14519 115 aa8.61□□□□□ -1.03
SCAF11-213ENST00000550629 THBS1P07996 1170 aa8.61□□□□□ -1.03
SCAF11-213ENST00000550629 MSX1P28360 303 aa8.61□□□□□ -1.03
SCAF11-213ENST00000550629 PLA2G4AP47712 749 aa8.61□□□□□ -1.03
SCAF11-213ENST00000550629 LCE3BQ5TA77 95 aa8.61□□□□□ -1.03
SCAF11-213ENST00000550629 CCDC102BQ68D86 513 aa8.61□□□□□ -1.03
SCAF11-213ENST00000550629 ZNF295-AS1Q8N0V1 137 aa8.61□□□□□ -1.03
SCAF11-213ENST00000550629 Q8N3U1 123 aa8.61□□□□□ -1.03
SCAF11-213ENST00000550629 OGFOD1Q8N543 542 aa8.61□□□□□ -1.03
SCAF11-213ENST00000550629 GALNT6Q8NCL4 622 aa8.61□□□□□ -1.03
SCAF11-213ENST00000550629 TPCN2Q8NHX9 752 aa8.61□□□□□ -1.03
SCAF11-213ENST00000550629 OXCT2Q9BYC2 517 aaPredicted RBP8.61□□□□□ -1.03
SCAF11-213ENST00000550629 ANKRD30AQ9BXX3 1397 aa8.61□□□□□ -1.03
SCAF11-213ENST00000550629 OIP5O43482 229 aa8.6□□□□□ -1.03
SCAF11-213ENST00000550629 CSB-PGBD3P0DP91 1061 aa8.6□□□□□ -1.03
SCAF11-213ENST00000550629 PGBD3Q8N328 593 aa8.6□□□□□ -1.03
SCAF11-213ENST00000550629 NIFKQ9BYG3 293 aaKnown RBP8.6□□□□□ -1.03
SCAF11-213ENST00000550629 NCOA1Q15788 1441 aa8.6□□□□□ -1.03
SCAF11-213ENST00000550629 ARHGEF40Q8TER5 1519 aa8.59□□□□□ -1.03
SCAF11-213ENST00000550629 ADGBQ8N7X0 1667 aa8.59□□□□□ -1.03
SCAF11-213ENST00000550629 LARGE2Q8N3Y3 721 aa8.59□□□□□ -1.03
SCAF11-213ENST00000550629 SPOCK3Q9BQ16 436 aa8.59□□□□□ -1.03
SCAF11-213ENST00000550629 CFHR5Q9BXR6 569 aa8.59□□□□□ -1.03
SCAF11-213ENST00000550629 RUBCNLQ9H714 662 aa8.59□□□□□ -1.03
SCAF11-213ENST00000550629 PTPRKQ15262 1439 aa8.59□□□□□ -1.03
SCAF11-213ENST00000550629 REREQ9P2R6 1566 aa8.59□□□□□ -1.03
SCAF11-213ENST00000550629 KIDINS220Q9ULH0 1771 aa8.58□□□□□ -1.04
SCAF11-213ENST00000550629 ATP10AO60312 1499 aa8.58□□□□□ -1.04
SCAF11-213ENST00000550629 HFM1A2PYH4 1435 aa8.58□□□□□ -1.04
SCAF11-213ENST00000550629 EPHA4P54764 986 aa8.58□□□□□ -1.04
SCAF11-213ENST00000550629 TNS4Q8IZW8 715 aa8.58□□□□□ -1.04
SCAF11-213ENST00000550629 AIDAQ96BJ3 306 aa8.58□□□□□ -1.04
SCAF11-213ENST00000550629 ZNF594Q96JF6 807 aaPredicted RBP8.58□□□□□ -1.04
SCAF11-213ENST00000550629 ZMYND15Q9H091 742 aa8.58□□□□□ -1.04
SCAF11-213ENST00000550629 CABP1Q9NZU7 370 aa8.58□□□□□ -1.04
SCAF11-213ENST00000550629 SCHIP1Q9P0W5 487 aaPredicted RBP8.58□□□□□ -1.04
SCAF11-213ENST00000550629 DUOX2Q9NRD8 1548 aa8.58□□□□□ -1.04
SCAF11-213ENST00000550629 ACIN1Q9UKV3 1341 aaKnown RBP8.57□□□□□ -1.04
SCAF11-213ENST00000550629 DIP2CQ9Y2E4 1556 aa8.57□□□□□ -1.04
SCAF11-213ENST00000550629 DKK1O94907 266 aa8.57□□□□□ -1.04
SCAF11-213ENST00000550629 RASA1P20936 1047 aa8.57□□□□□ -1.04
SCAF11-213ENST00000550629 LMOD1P29536 600 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms