RNA–Protein interactions for RNA: ENST00000550254.1

TUBA1A-206, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-206ENST00000550254 C9orf131Q5VYM1 1079 aa23.2■■□□□ 1.3
TUBA1A-206ENST00000550254 PRPF40BQ6NWY9 871 aaKnown RBP23.2■■□□□ 1.3
TUBA1A-206ENST00000550254 UTP14AQ9BVJ6 771 aaKnown RBP23.2■■□□□ 1.3
TUBA1A-206ENST00000550254 CCER2I3L3R5 266 aa23.19■■□□□ 1.3
TUBA1A-206ENST00000550254 PRELPP51888 382 aa23.19■■□□□ 1.3
TUBA1A-206ENST00000550254 CRY2Q49AN0 593 aa23.19■■□□□ 1.3
TUBA1A-206ENST00000550254 CCDC88AQ3V6T2 1871 aa23.19■■□□□ 1.3
TUBA1A-206ENST00000550254 ZNF521Q96K83 1311 aa23.18■■□□□ 1.3
TUBA1A-206ENST00000550254 NFKBIEO00221 500 aa23.18■■□□□ 1.3
TUBA1A-206ENST00000550254 SLC10A5Q5PT55 438 aa23.18■■□□□ 1.3
TUBA1A-206ENST00000550254 ISCA1Q9BUE6 129 aa23.18■■□□□ 1.3
TUBA1A-206ENST00000550254 CHMP4AQ9BY43 222 aa23.18■■□□□ 1.3
TUBA1A-206ENST00000550254 TCERG1O14776 1098 aaKnown RBP23.17■■□□□ 1.3
TUBA1A-206ENST00000550254 C3orf67Q6ZVT6 689 aa23.17■■□□□ 1.3
TUBA1A-206ENST00000550254 C7orf43Q8WVR3 580 aa23.17■■□□□ 1.3
TUBA1A-206ENST00000550254 LAMB2P55268 1798 aa23.17■■□□□ 1.3
TUBA1A-206ENST00000550254 EXOSC9Q06265 439 aaKnown RBP23.16■■□□□ 1.3
TUBA1A-206ENST00000550254 SYNE4Q8N205 404 aa23.16■■□□□ 1.3
TUBA1A-206ENST00000550254 RNF181Q9P0P0 153 aa23.16■■□□□ 1.3
TUBA1A-206ENST00000550254 RNF123Q5XPI4 1314 aa23.15■■□□□ 1.3
TUBA1A-206ENST00000550254 ATP5J2-PTCD1G3V325 749 aa23.15■■□□□ 1.3
TUBA1A-206ENST00000550254 GOLGA2Q08379 1002 aa23.15■■□□□ 1.3
TUBA1A-206ENST00000550254 RIC3Q7Z5B4 369 aa23.15■■□□□ 1.3
TUBA1A-206ENST00000550254 ZNF526Q8TF50 670 aaPredicted RBP23.15■■□□□ 1.3
TUBA1A-206ENST00000550254 ZNF428Q96B54 188 aa23.15■■□□□ 1.3
TUBA1A-206ENST00000550254 VAMP4O75379 141 aa23.14■■□□□ 1.29
TUBA1A-206ENST00000550254 ALDH1B1P30837 517 aa23.14■■□□□ 1.29
TUBA1A-206ENST00000550254 HOXA10P31260 410 aaPredicted RBP23.14■■□□□ 1.29
TUBA1A-206ENST00000550254 TRMT112Q9UI30 125 aaKnown RBP23.14■■□□□ 1.29
TUBA1A-206ENST00000550254 DDX60Q8IY21 1712 aaKnown RBP23.13■■□□□ 1.29
TUBA1A-206ENST00000550254 LMNB1P20700 586 aa23.13■■□□□ 1.29
TUBA1A-206ENST00000550254 TRIM28Q13263 835 aaKnown RBP23.13■■□□□ 1.29
TUBA1A-206ENST00000550254 NLRP3Q96P20 1036 aa23.13■■□□□ 1.29
TUBA1A-206ENST00000550254 OLFM4Q6UX06 510 aa23.12■■□□□ 1.29
TUBA1A-206ENST00000550254 G2E3Q7L622 706 aa23.12■■□□□ 1.29
TUBA1A-206ENST00000550254 STK31Q9BXU1 1019 aa23.12■■□□□ 1.29
TUBA1A-206ENST00000550254 GPBP1L1Q9HC44 474 aaPredicted RBP23.12■■□□□ 1.29
TUBA1A-206ENST00000550254 SH3TC1Q8TE82 1336 aa23.11■■□□□ 1.29
TUBA1A-206ENST00000550254 HCLS1P14317 486 aaPredicted RBP23.11■■□□□ 1.29
TUBA1A-206ENST00000550254 RPGRQ92834 1020 aaKnown RBP23.11■■□□□ 1.29
TUBA1A-206ENST00000550254 MYH16Q9H6N6 1097 aa23.11■■□□□ 1.29
TUBA1A-206ENST00000550254 DICER1Q9UPY3 1922 aaKnown RBP23.11■■□□□ 1.29
TUBA1A-206ENST00000550254 TIAM2Q8IVF5 1701 aa23.11■■□□□ 1.29
TUBA1A-206ENST00000550254 LTBP3Q9NS15 1303 aa23.1■■□□□ 1.29
TUBA1A-206ENST00000550254 SLC4A2P04920 1241 aa23.1■■□□□ 1.29
TUBA1A-206ENST00000550254 SOGA3Q5TF21 947 aa23.1■■□□□ 1.29
TUBA1A-206ENST00000550254 RBM17Q96I25 401 aaKnown RBP23.1■■□□□ 1.29
TUBA1A-206ENST00000550254 CRAMP1Q96RY5 1269 aa23.1■■□□□ 1.29
TUBA1A-206ENST00000550254 MYD88Q99836 296 aa23.1■■□□□ 1.29
TUBA1A-206ENST00000550254 CACNA1FO60840 1977 aa23.1■■□□□ 1.29
TUBA1A-206ENST00000550254 DDX58O95786 925 aaKnown RBP23.09■■□□□ 1.29
TUBA1A-206ENST00000550254 CCDC93Q567U6 631 aa23.09■■□□□ 1.29
TUBA1A-206ENST00000550254 DIEXFQ68CQ4 756 aaKnown RBP23.09■■□□□ 1.29
TUBA1A-206ENST00000550254 FAM89AQ96GI7 184 aa23.09■■□□□ 1.29
TUBA1A-206ENST00000550254 METTL22Q9BUU2 404 aaPredicted RBP23.09■■□□□ 1.29
TUBA1A-206ENST00000550254 SNED1Q8TER0 1413 aa23.08■■□□□ 1.29
TUBA1A-206ENST00000550254 KSR2Q6VAB6 950 aa23.08■■□□□ 1.29
TUBA1A-206ENST00000550254 TAOK3Q9H2K8 898 aa23.08■■□□□ 1.29
TUBA1A-206ENST00000550254 MAP3K2Q9Y2U5 619 aa23.08■■□□□ 1.29
TUBA1A-206ENST00000550254 PI4KAP2A4QPH2 592 aa23.07■■□□□ 1.28
TUBA1A-206ENST00000550254 PI4KAP1Q8N8J0 262 aa23.07■■□□□ 1.28
TUBA1A-206ENST00000550254 SLC51AQ86UW1 340 aa23.06■■□□□ 1.28
TUBA1A-206ENST00000550254 MIER1Q8N108 512 aa23.06■■□□□ 1.28
TUBA1A-206ENST00000550254 TAF1P21675 1872 aa23.06■■□□□ 1.28
TUBA1A-206ENST00000550254 ZC3H4Q9UPT8 1303 aaKnown RBP23.06■■□□□ 1.28
TUBA1A-206ENST00000550254 RTL5Q5HYW3 569 aaPredicted RBP23.05■■□□□ 1.28
TUBA1A-206ENST00000550254 CCDC191Q8NCU4 936 aa23.05■■□□□ 1.28
TUBA1A-206ENST00000550254 ABCC4O15439 1325 aa23.05■■□□□ 1.28
TUBA1A-206ENST00000550254 KIF3CO14782 793 aa23.04■■□□□ 1.28
TUBA1A-206ENST00000550254 IGKV5-2P06315 115 aa23.04■■□□□ 1.28
TUBA1A-206ENST00000550254 FKBP4Q02790 459 aaKnown RBP eCLIP23.04■■□□□ 1.28
TUBA1A-206ENST00000550254 FLIIQ13045 1269 aa23.04■■□□□ 1.28
TUBA1A-206ENST00000550254 RTKN2Q8IZC4 609 aa23.04■■□□□ 1.28
TUBA1A-206ENST00000550254 ZBTB38Q8NAP3 1195 aaPredicted RBP23.04■■□□□ 1.28
TUBA1A-206ENST00000550254 PPEF1O14829 653 aaPredicted RBP23.03■■□□□ 1.28
TUBA1A-206ENST00000550254 C1QTNF8P60827 252 aa23.03■■□□□ 1.28
TUBA1A-206ENST00000550254 NMRK2Q9NPI5 230 aa23.03■■□□□ 1.28
TUBA1A-206ENST00000550254 IRS4O14654 1257 aaPredicted RBP23.02■■□□□ 1.28
TUBA1A-206ENST00000550254 SLFN5Q08AF3 891 aa23.02■■□□□ 1.28
TUBA1A-206ENST00000550254 SF3B3Q15393 1217 aaKnown RBP23.02■■□□□ 1.28
TUBA1A-206ENST00000550254 CWC25Q9NXE8 425 aaPredicted RBP23.02■■□□□ 1.28
TUBA1A-206ENST00000550254 E9PSI1 815 aa23.01■■□□□ 1.27
TUBA1A-206ENST00000550254 PCCAP05165 728 aaPredicted RBP23.01■■□□□ 1.27
TUBA1A-206ENST00000550254 CC2D2BQ6DHV5 1058 aa23.01■■□□□ 1.27
TUBA1A-206ENST00000550254 JARID2Q92833 1246 aaPredicted RBP23.01■■□□□ 1.27
TUBA1A-206ENST00000550254 COL4A1P02462 1669 aa23■■□□□ 1.27
TUBA1A-206ENST00000550254 DDX46Q7L014 1031 aaKnown RBP23■■□□□ 1.27
TUBA1A-206ENST00000550254 CDCA7LQ96GN5 454 aa23■■□□□ 1.27
TUBA1A-206ENST00000550254 ZNF277Q9NRM2 450 aaPredicted RBP23■■□□□ 1.27
TUBA1A-206ENST00000550254 KDM2BQ8NHM5 1336 aa23■■□□□ 1.27
TUBA1A-206ENST00000550254 GLTPD2A6NH11 291 aa22.99■■□□□ 1.27
TUBA1A-206ENST00000550254 FKBP5Q13451 457 aaPredicted RBP22.99■■□□□ 1.27
TUBA1A-206ENST00000550254 GRAPQ13588 217 aa22.99■■□□□ 1.27
TUBA1A-206ENST00000550254 CWF19L2Q2TBE0 894 aaKnown RBP22.99■■□□□ 1.27
TUBA1A-206ENST00000550254 GRAPLQ8TC17 118 aaPredicted RBP22.99■■□□□ 1.27
TUBA1A-206ENST00000550254 PSMD1Q99460 953 aa22.99■■□□□ 1.27
TUBA1A-206ENST00000550254 ATP6V0A2Q9Y487 856 aa22.99■■□□□ 1.27
TUBA1A-206ENST00000550254 NEURL1BA8MQ27 555 aa22.98■■□□□ 1.27
TUBA1A-206ENST00000550254 BBOX1O75936 387 aa22.98■■□□□ 1.27
TUBA1A-206ENST00000550254 NEXNQ0ZGT2 675 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms