RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 OSBPL3Q9H4L5 887 aa12.84□□□□□ -0.35
SMARCC2-208ENST00000550150 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.84□□□□□ -0.35
SMARCC2-208ENST00000550150 SNX14Q9Y5W7 946 aa12.84□□□□□ -0.35
SMARCC2-208ENST00000550150 U2AF2P26368 475 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMARCC2-208ENST00000550150 ATP8B2P98198 1209 aa12.83□□□□□ -0.36
SMARCC2-208ENST00000550150 CCDC30Q5VVM6 783 aa12.83□□□□□ -0.36
SMARCC2-208ENST00000550150 ZNF710Q8N1W2 664 aa12.83□□□□□ -0.36
SMARCC2-208ENST00000550150 PDCL2Q8N4E4 241 aa12.83□□□□□ -0.36
SMARCC2-208ENST00000550150 BCL2L12Q9HB09 334 aa12.83□□□□□ -0.36
SMARCC2-208ENST00000550150 COL5A2P05997 1499 aaPredicted RBP12.83□□□□□ -0.36
SMARCC2-208ENST00000550150 F13A1P00488 732 aa12.83□□□□□ -0.36
SMARCC2-208ENST00000550150 PIP4K2BP78356 416 aa12.83□□□□□ -0.36
SMARCC2-208ENST00000550150 LUZP1Q86V48 1076 aa12.83□□□□□ -0.36
SMARCC2-208ENST00000550150 LIMCH1Q9UPQ0 1083 aa12.83□□□□□ -0.36
SMARCC2-208ENST00000550150 PHLPP1O60346 1717 aa12.83□□□□□ -0.36
SMARCC2-208ENST00000550150 RIOK3O14730 519 aaKnown RBP12.83□□□□□ -0.36
SMARCC2-208ENST00000550150 PTGS1P23219 599 aa12.83□□□□□ -0.36
SMARCC2-208ENST00000550150 ANAPC15P60006 121 aa12.83□□□□□ -0.36
SMARCC2-208ENST00000550150 CEBPZQ03701 1054 aaKnown RBP12.83□□□□□ -0.36
SMARCC2-208ENST00000550150 HDGFL1Q5TGJ6 251 aa12.83□□□□□ -0.36
SMARCC2-208ENST00000550150 RUFY3Q7L099 469 aa12.83□□□□□ -0.36
SMARCC2-208ENST00000550150 SHANK3Q9BYB0 1731 aa12.82□□□□□ -0.36
SMARCC2-208ENST00000550150 PPFIA3O75145 1194 aa12.82□□□□□ -0.36
SMARCC2-208ENST00000550150 ATP2B3Q16720 1220 aa12.82□□□□□ -0.36
SMARCC2-208ENST00000550150 ATP6V1DQ9Y5K8 247 aa12.82□□□□□ -0.36
SMARCC2-208ENST00000550150 MAP3K5Q99683 1374 aa12.82□□□□□ -0.36
SMARCC2-208ENST00000550150 HSPA4P34932 840 aa12.82□□□□□ -0.36
SMARCC2-208ENST00000550150 MPRIPQ6WCQ1 1025 aa12.82□□□□□ -0.36
SMARCC2-208ENST00000550150 CNTROBQ8N137 903 aa12.82□□□□□ -0.36
SMARCC2-208ENST00000550150 NLRP2Q9NX02 1062 aa12.82□□□□□ -0.36
SMARCC2-208ENST00000550150 CCDC9Q9Y3X0 531 aaKnown RBP12.82□□□□□ -0.36
SMARCC2-208ENST00000550150 AP5Z1O43299 807 aa12.81□□□□□ -0.36
SMARCC2-208ENST00000550150 KCNQ3O43525 872 aa12.81□□□□□ -0.36
SMARCC2-208ENST00000550150 ADCK5Q3MIX3 580 aa12.81□□□□□ -0.36
SMARCC2-208ENST00000550150 RHPN1Q8TCX5 695 aa12.81□□□□□ -0.36
SMARCC2-208ENST00000550150 TRIM5Q9C035 493 aa12.81□□□□□ -0.36
SMARCC2-208ENST00000550150 PDRG1Q9NUG6 133 aa12.81□□□□□ -0.36
SMARCC2-208ENST00000550150 TCHHQ07283 1943 aa12.81□□□□□ -0.36
SMARCC2-208ENST00000550150 GNAT3A8MTJ3 354 aa12.81□□□□□ -0.36
SMARCC2-208ENST00000550150 LRMPQ12912 555 aa12.81□□□□□ -0.36
SMARCC2-208ENST00000550150 SMAP1Q8IYB5 467 aaPredicted RBP12.81□□□□□ -0.36
SMARCC2-208ENST00000550150 PRIMPOLQ96LW4 560 aa12.81□□□□□ -0.36
SMARCC2-208ENST00000550150 NBPF7P0C2Y1 421 aaPredicted RBP12.81□□□□□ -0.36
SMARCC2-208ENST00000550150 LARP1BQ659C4 914 aaKnown RBP12.81□□□□□ -0.36
SMARCC2-208ENST00000550150 USP44Q9H0E7 712 aa12.81□□□□□ -0.36
SMARCC2-208ENST00000550150 PRDM11Q9NQV5 511 aa12.81□□□□□ -0.36
SMARCC2-208ENST00000550150 CEMIPQ8WUJ3 1361 aa12.81□□□□□ -0.36
SMARCC2-208ENST00000550150 RPAP1Q9BWH6 1393 aaPredicted RBP12.8□□□□□ -0.36
SMARCC2-208ENST00000550150 NPHP1O15259 732 aa12.8□□□□□ -0.36
SMARCC2-208ENST00000550150 COL22A1Q8NFW1 1626 aaPredicted RBP12.8□□□□□ -0.36
SMARCC2-208ENST00000550150 GLI3P10071 1580 aa12.8□□□□□ -0.36
SMARCC2-208ENST00000550150 GOLGA6L6A8MZA4 724 aa12.8□□□□□ -0.36
SMARCC2-208ENST00000550150 CCDC192P0DO97 292 aa12.8□□□□□ -0.36
SMARCC2-208ENST00000550150 LARP1Q6PKG0 1096 aaKnown RBP12.8□□□□□ -0.36
SMARCC2-208ENST00000550150 CCDC186Q7Z3E2 898 aa12.8□□□□□ -0.36
SMARCC2-208ENST00000550150 NAP1L2Q9ULW6 460 aaPredicted RBP12.8□□□□□ -0.36
SMARCC2-208ENST00000550150 PKD1L3Q7Z443 1732 aa12.8□□□□□ -0.36
SMARCC2-208ENST00000550150 BICD2Q8TD16 824 aa12.79□□□□□ -0.36
SMARCC2-208ENST00000550150 PARP4Q9UKK3 1724 aaKnown RBP12.79□□□□□ -0.36
SMARCC2-208ENST00000550150 SGSM2O43147 1006 aa12.79□□□□□ -0.36
SMARCC2-208ENST00000550150 PTH1RQ03431 593 aa12.79□□□□□ -0.36
SMARCC2-208ENST00000550150 TAF7Q15545 349 aaPredicted RBP12.79□□□□□ -0.36
SMARCC2-208ENST00000550150 UVSSAQ2YD98 709 aa12.79□□□□□ -0.36
SMARCC2-208ENST00000550150 NRBP1Q9UHY1 535 aa12.79□□□□□ -0.36
SMARCC2-208ENST00000550150 KDM6AO15550 1401 aaPredicted RBP12.79□□□□□ -0.36
SMARCC2-208ENST00000550150 SOS1Q07889 1333 aaPredicted RBP12.79□□□□□ -0.36
SMARCC2-208ENST00000550150 NAA30Q147X3 362 aaPredicted RBP12.79□□□□□ -0.36
SMARCC2-208ENST00000550150 KCNF1Q9H3M0 494 aa12.79□□□□□ -0.36
SMARCC2-208ENST00000550150 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMARCC2-208ENST00000550150 PA2G4Q9UQ80 394 aaKnown RBP12.79□□□□□ -0.36
SMARCC2-208ENST00000550150 V9GYY5 206 aaPredicted RBP12.79□□□□□ -0.36
SMARCC2-208ENST00000550150 ZNF530Q6P9A1 599 aaPredicted RBP12.78□□□□□ -0.36
SMARCC2-208ENST00000550150 SIL1Q9H173 461 aa12.78□□□□□ -0.36
SMARCC2-208ENST00000550150 TNMDQ9H2S6 317 aa12.78□□□□□ -0.36
SMARCC2-208ENST00000550150 CYP46A1Q9Y6A2 500 aa12.78□□□□□ -0.36
SMARCC2-208ENST00000550150 RAD50Q92878 1312 aa12.78□□□□□ -0.36
SMARCC2-208ENST00000550150 LETM1O95202 739 aaPredicted RBP12.78□□□□□ -0.36
SMARCC2-208ENST00000550150 LIG1P18858 919 aa12.78□□□□□ -0.36
SMARCC2-208ENST00000550150 NUP62CLQ9H1M0 184 aa12.78□□□□□ -0.36
SMARCC2-208ENST00000550150 SCN11AQ9UI33 1791 aa12.78□□□□□ -0.36
SMARCC2-208ENST00000550150 STRN4Q9NRL3 753 aa12.77□□□□□ -0.36
SMARCC2-208ENST00000550150 DACT1Q9NYF0 836 aa12.77□□□□□ -0.36
SMARCC2-208ENST00000550150 PXDNLA1KZ92 1463 aa12.77□□□□□ -0.37
SMARCC2-208ENST00000550150 CYP27B1O15528 508 aa12.77□□□□□ -0.37
SMARCC2-208ENST00000550150 RAB11FIP3O75154 756 aa12.77□□□□□ -0.37
SMARCC2-208ENST00000550150 IFIT2P09913 472 aaKnown RBP12.77□□□□□ -0.37
SMARCC2-208ENST00000550150 CSB-PGBD3P0DP91 1061 aa12.77□□□□□ -0.37
SMARCC2-208ENST00000550150 CDC37L1Q7L3B6 337 aa12.77□□□□□ -0.37
SMARCC2-208ENST00000550150 ZNF771Q7L3S4 317 aaPredicted RBP12.77□□□□□ -0.37
SMARCC2-208ENST00000550150 PRAMEF22A3QJZ6 481 aa12.77□□□□□ -0.37
SMARCC2-208ENST00000550150 PI4KAP2A4QPH2 592 aa12.77□□□□□ -0.37
SMARCC2-208ENST00000550150 ZKSCAN1P17029 563 aaPredicted RBP12.77□□□□□ -0.37
SMARCC2-208ENST00000550150 ANO6Q4KMQ2 910 aa12.77□□□□□ -0.37
SMARCC2-208ENST00000550150 PI4KAP1Q8N8J0 262 aa12.77□□□□□ -0.37
SMARCC2-208ENST00000550150 DDX11Q96FC9 970 aa12.77□□□□□ -0.37
SMARCC2-208ENST00000550150 PODXL2Q9NZ53 605 aa12.77□□□□□ -0.37
SMARCC2-208ENST00000550150 OVOS2A0A0G2JMS6 1433 aa12.76□□□□□ -0.37
SMARCC2-208ENST00000550150 FGD1P98174 961 aa12.76□□□□□ -0.37
SMARCC2-208ENST00000550150 MAP3K11Q16584 847 aa12.76□□□□□ -0.37
SMARCC2-208ENST00000550150 ME3Q16798 604 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms