RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 STYK1Q6J9G0 422 aa33.26■■■□□ 2.91
CPSF6-205ENST00000550075 MASTLQ96GX5 879 aa33.26■■■□□ 2.91
CPSF6-205ENST00000550075 TNRC6CQ9HCJ0 1690 aaKnown RBP33.26■■■□□ 2.91
CPSF6-205ENST00000550075 SRGNP10124 158 aa33.25■■■□□ 2.91
CPSF6-205ENST00000550075 SLFN5Q08AF3 891 aa33.25■■■□□ 2.91
CPSF6-205ENST00000550075 CNKSR1Q969H4 720 aa33.24■■■□□ 2.91
CPSF6-205ENST00000550075 KLRG2A4D1S0 409 aaPredicted RBP33.23■■■□□ 2.91
CPSF6-205ENST00000550075 NPR1P16066 1061 aa33.23■■■□□ 2.91
CPSF6-205ENST00000550075 ISCA1Q9BUE6 129 aa33.23■■■□□ 2.91
CPSF6-205ENST00000550075 TRMT112Q9UI30 125 aaKnown RBP33.23■■■□□ 2.91
CPSF6-205ENST00000550075 UTRNP46939 3433 aa33.23■■■□□ 2.91
CPSF6-205ENST00000550075 TRIM28Q13263 835 aaKnown RBP33.21■■■□□ 2.91
CPSF6-205ENST00000550075 KSR2Q6VAB6 950 aa33.21■■■□□ 2.91
CPSF6-205ENST00000550075 CACNA1SQ13698 1873 aa33.2■■■□□ 2.91
CPSF6-205ENST00000550075 ATP5J2-PTCD1G3V325 749 aa33.2■■■□□ 2.91
CPSF6-205ENST00000550075 FLIIQ13045 1269 aa33.2■■■□□ 2.91
CPSF6-205ENST00000550075 ARHGAP27Q6ZUM4 889 aa33.2■■■□□ 2.91
CPSF6-205ENST00000550075 SH3TC1Q8TE82 1336 aa33.2■■■□□ 2.91
CPSF6-205ENST00000550075 MYD88Q99836 296 aa33.19■■■□□ 2.9
CPSF6-205ENST00000550075 METTL22Q9BUU2 404 aaPredicted RBP33.19■■■□□ 2.9
CPSF6-205ENST00000550075 MAP3K2Q9Y2U5 619 aa33.19■■■□□ 2.9
CPSF6-205ENST00000550075 HNRNPUQ00839 825 aaKnown RBP eCLIP33.18■■■□□ 2.9
CPSF6-205ENST00000550075 NEXNQ0ZGT2 675 aa33.18■■■□□ 2.9
CPSF6-205ENST00000550075 PI4KAP2A4QPH2 592 aa33.17■■■□□ 2.9
CPSF6-205ENST00000550075 FKBP5Q13451 457 aaPredicted RBP33.17■■■□□ 2.9
CPSF6-205ENST00000550075 CRY2Q49AN0 593 aa33.17■■■□□ 2.9
CPSF6-205ENST00000550075 G2E3Q7L622 706 aa33.17■■■□□ 2.9
CPSF6-205ENST00000550075 PI4KAP1Q8N8J0 262 aa33.17■■■□□ 2.9
CPSF6-205ENST00000550075 RPGRQ92834 1020 aaKnown RBP33.17■■■□□ 2.9
CPSF6-205ENST00000550075 CDCA7LQ96GN5 454 aa33.17■■■□□ 2.9
CPSF6-205ENST00000550075 NLRP3Q96P20 1036 aa33.17■■■□□ 2.9
CPSF6-205ENST00000550075 SLC10A5Q5PT55 438 aa33.16■■■□□ 2.9
CPSF6-205ENST00000550075 ADCY9O60503 1353 aa33.16■■■□□ 2.9
CPSF6-205ENST00000550075 PRPF40BQ6NWY9 871 aaKnown RBP33.15■■■□□ 2.9
CPSF6-205ENST00000550075 CCDC191Q8NCU4 936 aa33.15■■■□□ 2.9
CPSF6-205ENST00000550075 ZNF428Q96B54 188 aa33.15■■■□□ 2.9
CPSF6-205ENST00000550075 ALDH1B1P30837 517 aa33.14■■■□□ 2.9
CPSF6-205ENST00000550075 SOGA3Q5TF21 947 aa33.14■■■□□ 2.9
CPSF6-205ENST00000550075 SLX4Q8IY92 1834 aa33.14■■■□□ 2.9
CPSF6-205ENST00000550075 TRMT2AQ8IZ69 625 aaKnown RBP33.13■■■□□ 2.89
CPSF6-205ENST00000550075 CWC25Q9NXE8 425 aaPredicted RBP33.13■■■□□ 2.89
CPSF6-205ENST00000550075 LAMB2P55268 1798 aa33.13■■■□□ 2.89
CPSF6-205ENST00000550075 HSP90B1P14625 803 aaKnown RBP33.12■■■□□ 2.89
CPSF6-205ENST00000550075 CT47B1P0C2W7 299 aaPredicted RBP33.1■■■□□ 2.89
CPSF6-205ENST00000550075 RBM17Q96I25 401 aaKnown RBP33.1■■■□□ 2.89
CPSF6-205ENST00000550075 DDX60Q8IY21 1712 aaKnown RBP33.1■■■□□ 2.89
CPSF6-205ENST00000550075 C21orf2O43822 256 aa33.09■■■□□ 2.89
CPSF6-205ENST00000550075 HCLS1P14317 486 aaPredicted RBP33.09■■■□□ 2.89
CPSF6-205ENST00000550075 HOXA10P31260 410 aaPredicted RBP33.09■■■□□ 2.89
CPSF6-205ENST00000550075 ZBTB38Q8NAP3 1195 aaPredicted RBP33.09■■■□□ 2.89
CPSF6-205ENST00000550075 DNAAF4Q8WXU2 420 aa33.09■■■□□ 2.89
CPSF6-205ENST00000550075 FAM89AQ96GI7 184 aa33.09■■■□□ 2.89
CPSF6-205ENST00000550075 ZNF219Q9P2Y4 722 aaPredicted RBP33.08■■■□□ 2.89
CPSF6-205ENST00000550075 CRAMP1Q96RY5 1269 aa33.07■■■□□ 2.88
CPSF6-205ENST00000550075 PCCAP05165 728 aaPredicted RBP33.06■■■□□ 2.88
CPSF6-205ENST00000550075 C3orf67Q6ZVT6 689 aa33.06■■■□□ 2.88
CPSF6-205ENST00000550075 SYNE4Q8N205 404 aa33.06■■■□□ 2.88
CPSF6-205ENST00000550075 IRS4O14654 1257 aaPredicted RBP33.05■■■□□ 2.88
CPSF6-205ENST00000550075 FER1L6Q2WGJ9 1857 aa33.04■■■□□ 2.88
CPSF6-205ENST00000550075 IGKV5-2P06315 115 aa33.04■■■□□ 2.88
CPSF6-205ENST00000550075 ALDH1L2Q3SY69 923 aa33.04■■■□□ 2.88
CPSF6-205ENST00000550075 CCDC93Q567U6 631 aa33.04■■■□□ 2.88
CPSF6-205ENST00000550075 RTL5Q5HYW3 569 aaPredicted RBP33.04■■■□□ 2.88
CPSF6-205ENST00000550075 NEURL1BA8MQ27 555 aa33.03■■■□□ 2.88
CPSF6-205ENST00000550075 DDX46Q7L014 1031 aaKnown RBP33.02■■■□□ 2.88
CPSF6-205ENST00000550075 LINS1Q8NG48 757 aa33.02■■■□□ 2.88
CPSF6-205ENST00000550075 ZBED9Q6R2W3 1325 aa33.02■■■□□ 2.88
CPSF6-205ENST00000550075 SBF1O95248 1867 aa33.01■■■□□ 2.88
CPSF6-205ENST00000550075 RASSF7Q02833 373 aa33.01■■■□□ 2.87
CPSF6-205ENST00000550075 CWF19L2Q2TBE0 894 aaKnown RBP33.01■■■□□ 2.87
CPSF6-205ENST00000550075 MRPL50Q8N5N7 158 aaKnown RBP33.01■■■□□ 2.87
CPSF6-205ENST00000550075 SSH1Q8WYL5 1049 aa33.01■■■□□ 2.87
CPSF6-205ENST00000550075 NFKBIEO00221 500 aa33■■■□□ 2.87
CPSF6-205ENST00000550075 C9orf131Q5VYM1 1079 aa33■■■□□ 2.87
CPSF6-205ENST00000550075 CC2D2BQ6DHV5 1058 aa33■■■□□ 2.87
CPSF6-205ENST00000550075 C7orf43Q8WVR3 580 aa33■■■□□ 2.87
CPSF6-205ENST00000550075 SMC4Q9NTJ3 1288 aa33■■■□□ 2.87
CPSF6-205ENST00000550075 PTPRCP08575 1304 aa33■■■□□ 2.87
CPSF6-205ENST00000550075 CDHR2Q9BYE9 1310 aa33■■■□□ 2.87
CPSF6-205ENST00000550075 LTBP3Q9NS15 1303 aa33■■■□□ 2.87
CPSF6-205ENST00000550075 LMNB1P20700 586 aa32.99■■■□□ 2.87
CPSF6-205ENST00000550075 TMX4Q9H1E5 349 aaPredicted RBP32.99■■■□□ 2.87
CPSF6-205ENST00000550075 TAOK3Q9H2K8 898 aa32.99■■■□□ 2.87
CPSF6-205ENST00000550075 RNF181Q9P0P0 153 aa32.99■■■□□ 2.87
CPSF6-205ENST00000550075 ABCC4O15439 1325 aa32.99■■■□□ 2.87
CPSF6-205ENST00000550075 PPEF1O14829 653 aaPredicted RBP32.98■■■□□ 2.87
CPSF6-205ENST00000550075 SF3B3Q15393 1217 aaKnown RBP32.98■■■□□ 2.87
CPSF6-205ENST00000550075 F6X3S4 739 aa32.97■■■□□ 2.87
CPSF6-205ENST00000550075 RTKN2Q8IZC4 609 aa32.97■■■□□ 2.87
CPSF6-205ENST00000550075 ZNF784Q8NCA9 323 aaPredicted RBP32.97■■■□□ 2.87
CPSF6-205ENST00000550075 PDE8AO60658 829 aa32.96■■■□□ 2.87
CPSF6-205ENST00000550075 GCKRQ14397 625 aa32.96■■■□□ 2.87
CPSF6-205ENST00000550075 GRIPAP1Q4V328 841 aa32.96■■■□□ 2.87
CPSF6-205ENST00000550075 BCL2L13Q9BXK5 485 aa32.96■■■□□ 2.87
CPSF6-205ENST00000550075 MYH3P11055 1940 aa32.94■■■□□ 2.86
CPSF6-205ENST00000550075 BBOX1O75936 387 aa32.94■■■□□ 2.86
CPSF6-205ENST00000550075 GRAPQ13588 217 aa32.94■■■□□ 2.86
CPSF6-205ENST00000550075 GRAPLQ8TC17 118 aaPredicted RBP32.94■■■□□ 2.86
CPSF6-205ENST00000550075 CCDC88AQ3V6T2 1871 aa32.94■■■□□ 2.86
CPSF6-205ENST00000550075 ZC3H4Q9UPT8 1303 aaKnown RBP32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms