RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 ERFEQ4G0M1 354 aa19.05■□□□□ 0.64
GPN3-206ENST00000549963 NUTM1Q86Y26 1132 aa19.05■□□□□ 0.64
GPN3-206ENST00000549963 CCDC191Q8NCU4 936 aa19.05■□□□□ 0.64
GPN3-206ENST00000549963 PXDNLA1KZ92 1463 aa19.04■□□□□ 0.64
GPN3-206ENST00000549963 NTSR2O95665 410 aa19.04■□□□□ 0.64
GPN3-206ENST00000549963 CHRNA5P30532 468 aa19.04■□□□□ 0.64
GPN3-206ENST00000549963 DALRD3Q5D0E6 543 aaKnown RBP19.04■□□□□ 0.64
GPN3-206ENST00000549963 ZNF622Q969S3 477 aaKnown RBP eCLIP19.04■□□□□ 0.64
GPN3-206ENST00000549963 SH3TC1Q8TE82 1336 aa19.03■□□□□ 0.64
GPN3-206ENST00000549963 MRPL50Q8N5N7 158 aaKnown RBP19.03■□□□□ 0.64
GPN3-206ENST00000549963 DNAAF4Q8WXU2 420 aa19.03■□□□□ 0.64
GPN3-206ENST00000549963 SSH1Q8WYL5 1049 aa19.03■□□□□ 0.64
GPN3-206ENST00000549963 NLRP3Q96P20 1036 aa19.03■□□□□ 0.64
GPN3-206ENST00000549963 SMC4Q9NTJ3 1288 aa19.03■□□□□ 0.64
GPN3-206ENST00000549963 CWC25Q9NXE8 425 aaPredicted RBP19.03■□□□□ 0.64
GPN3-206ENST00000549963 BCS1LQ9Y276 419 aa19.03■□□□□ 0.64
GPN3-206ENST00000549963 KCNA3P22001 575 aa19.02■□□□□ 0.64
GPN3-206ENST00000549963 SLC10A5Q5PT55 438 aa19.02■□□□□ 0.64
GPN3-206ENST00000549963 TTLL6Q8N841 843 aa19.02■□□□□ 0.64
GPN3-206ENST00000549963 MASTLQ96GX5 879 aa19.02■□□□□ 0.64
GPN3-206ENST00000549963 PTPRCP08575 1304 aa19.01■□□□□ 0.63
GPN3-206ENST00000549963 ANKRD31Q8N7Z5 1873 aa19.01■□□□□ 0.63
GPN3-206ENST00000549963 NPR1P16066 1061 aa19.01■□□□□ 0.63
GPN3-206ENST00000549963 STYK1Q6J9G0 422 aa19.01■□□□□ 0.63
GPN3-206ENST00000549963 CNKSR1Q969H4 720 aa19.01■□□□□ 0.63
GPN3-206ENST00000549963 ADCY9O60503 1353 aa19.01■□□□□ 0.63
GPN3-206ENST00000549963 KLRG2A4D1S0 409 aaPredicted RBP19■□□□□ 0.63
GPN3-206ENST00000549963 SRGNP10124 158 aa19■□□□□ 0.63
GPN3-206ENST00000549963 ALDH1B1P30837 517 aa19■□□□□ 0.63
GPN3-206ENST00000549963 ZBTB38Q8NAP3 1195 aaPredicted RBP19■□□□□ 0.63
GPN3-206ENST00000549963 RPGRQ92834 1020 aaKnown RBP19■□□□□ 0.63
GPN3-206ENST00000549963 WWC3Q9ULE0 1092 aa19■□□□□ 0.63
GPN3-206ENST00000549963 LINS1Q8NG48 757 aa18.99■□□□□ 0.63
GPN3-206ENST00000549963 FAM89AQ96GI7 184 aa18.99■□□□□ 0.63
GPN3-206ENST00000549963 BCL2L13Q9BXK5 485 aa18.99■□□□□ 0.63
GPN3-206ENST00000549963 KIAA1551Q9HCM1 1747 aa18.99■□□□□ 0.63
GPN3-206ENST00000549963 PCCAP05165 728 aaPredicted RBP18.98■□□□□ 0.63
GPN3-206ENST00000549963 YBX3P16989 372 aaKnown RBP eCLIP18.98■□□□□ 0.631e-7■■□□□ 13.6
GPN3-206ENST00000549963 RARSP54136 660 aaKnown RBP18.98■□□□□ 0.63
GPN3-206ENST00000549963 SLC4A10Q6U841 1118 aa18.98■□□□□ 0.63
GPN3-206ENST00000549963 RBM17Q96I25 401 aaKnown RBP18.98■□□□□ 0.63
GPN3-206ENST00000549963 DLEC1Q9Y238 1755 aa18.97■□□□□ 0.63
GPN3-206ENST00000549963 NEURL1BA8MQ27 555 aa18.97■□□□□ 0.63
GPN3-206ENST00000549963 F6X3S4 739 aa18.97■□□□□ 0.63
GPN3-206ENST00000549963 IPO8O15397 1037 aaKnown RBP18.97■□□□□ 0.63
GPN3-206ENST00000549963 HCLS1P14317 486 aaPredicted RBP18.97■□□□□ 0.63
GPN3-206ENST00000549963 BRPF1P55201 1214 aaPredicted RBP18.97■□□□□ 0.63
GPN3-206ENST00000549963 RTL5Q5HYW3 569 aaPredicted RBP18.97■□□□□ 0.63
GPN3-206ENST00000549963 RIC1Q4ADV7 1423 aa18.97■□□□□ 0.63
GPN3-206ENST00000549963 BRCA1P38398 1863 aaKnown RBP18.97■□□□□ 0.63
GPN3-206ENST00000549963 IRS4O14654 1257 aaPredicted RBP18.96■□□□□ 0.63
GPN3-206ENST00000549963 IGKV5-2P06315 115 aa18.96■□□□□ 0.63
GPN3-206ENST00000549963 CWF19L2Q2TBE0 894 aaKnown RBP18.96■□□□□ 0.63
GPN3-206ENST00000549963 ABCC12Q96J65 1359 aa18.95■□□□□ 0.62
GPN3-206ENST00000549963 CRY2Q49AN0 593 aa18.95■□□□□ 0.62
GPN3-206ENST00000549963 ARHGAP27Q6ZUM4 889 aa18.95■□□□□ 0.62
GPN3-206ENST00000549963 SYNE4Q8N205 404 aa18.95■□□□□ 0.62
GPN3-206ENST00000549963 API5Q9BZZ5 524 aaKnown RBP18.95■□□□□ 0.62
GPN3-206ENST00000549963 SRCIN1Q9C0H9 1055 aa18.95■□□□□ 0.62
GPN3-206ENST00000549963 TMX4Q9H1E5 349 aaPredicted RBP18.95■□□□□ 0.62
GPN3-206ENST00000549963 NOB1Q9ULX3 412 aaKnown RBP18.95■□□□□ 0.62
GPN3-206ENST00000549963 KIF16BQ96L93 1317 aa18.95■□□□□ 0.62
GPN3-206ENST00000549963 ALDH1L1O75891 902 aa18.94■□□□□ 0.62
GPN3-206ENST00000549963 GCKRQ14397 625 aa18.94■□□□□ 0.62
GPN3-206ENST00000549963 BEND3Q5T5X7 828 aa18.94■□□□□ 0.62
GPN3-206ENST00000549963 SOGA3Q5TF21 947 aa18.94■□□□□ 0.62
GPN3-206ENST00000549963 DDX46Q7L014 1031 aaKnown RBP18.94■□□□□ 0.62
GPN3-206ENST00000549963 ARFGEF1Q9Y6D6 1849 aa18.94■□□□□ 0.62
GPN3-206ENST00000549963 PDE8AO60658 829 aa18.93■□□□□ 0.62
GPN3-206ENST00000549963 HOXA10P31260 410 aaPredicted RBP18.93■□□□□ 0.62
GPN3-206ENST00000549963 ARHGAP45Q92619 1136 aa18.93■□□□□ 0.62
GPN3-206ENST00000549963 YTHDC1Q96MU7 727 aaKnown RBP18.93■□□□□ 0.62
GPN3-206ENST00000549963 CRAMP1Q96RY5 1269 aa18.93■□□□□ 0.62
GPN3-206ENST00000549963 C9orf78Q9NZ63 289 aaPredicted RBP18.93■□□□□ 0.62
GPN3-206ENST00000549963 CDHR2Q9BYE9 1310 aa18.93■□□□□ 0.62
GPN3-206ENST00000549963 CHD4Q14839 1912 aa18.92■□□□□ 0.62
GPN3-206ENST00000549963 H7C1W4 665 aa18.92■□□□□ 0.62
GPN3-206ENST00000549963 PRPF40BQ6NWY9 871 aaKnown RBP18.92■□□□□ 0.62
GPN3-206ENST00000549963 COL11A2P13942 1736 aaPredicted RBP18.91■□□□□ 0.62
GPN3-206ENST00000549963 CACNA1SQ13698 1873 aa18.91■□□□□ 0.62
GPN3-206ENST00000549963 SF3B3Q15393 1217 aaKnown RBP18.91■□□□□ 0.62
GPN3-206ENST00000549963 UBE3BQ7Z3V4 1068 aa18.91■□□□□ 0.62
GPN3-206ENST00000549963 C21orf2O43822 256 aa18.9■□□□□ 0.62
GPN3-206ENST00000549963 BBOX1O75936 387 aa18.9■□□□□ 0.62
GPN3-206ENST00000549963 CCDC152Q4G0S7 254 aa18.9■□□□□ 0.62
GPN3-206ENST00000549963 JARID2Q92833 1246 aaPredicted RBP18.9■□□□□ 0.62
GPN3-206ENST00000549963 FRAT1Q92837 279 aaPredicted RBP18.9■□□□□ 0.62
GPN3-206ENST00000549963 ZNF219Q9P2Y4 722 aaPredicted RBP18.9■□□□□ 0.62
GPN3-206ENST00000549963 BCAR3O75815 825 aa18.89■□□□□ 0.61
GPN3-206ENST00000549963 CCT4P50991 539 aaKnown RBP18.89■□□□□ 0.61
GPN3-206ENST00000549963 GRIPAP1Q4V328 841 aa18.89■□□□□ 0.61
GPN3-206ENST00000549963 TNRC6CQ9HCJ0 1690 aaKnown RBP18.89■□□□□ 0.61
GPN3-206ENST00000549963 DDX60Q8IY21 1712 aaKnown RBP18.88■□□□□ 0.61
GPN3-206ENST00000549963 SLX4Q8IY92 1834 aa18.88■□□□□ 0.61
GPN3-206ENST00000549963 GRM8O00222 908 aa18.88■□□□□ 0.61
GPN3-206ENST00000549963 CC2D2BQ6DHV5 1058 aa18.88■□□□□ 0.61
GPN3-206ENST00000549963 C3orf67Q6ZVT6 689 aa18.88■□□□□ 0.61
GPN3-206ENST00000549963 LAMB2P55268 1798 aa18.88■□□□□ 0.61
GPN3-206ENST00000549963 ZKSCAN2Q63HK3 967 aa18.87■□□□□ 0.61
GPN3-206ENST00000549963 TMC4Q7Z404 712 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms