RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 ZNF853P0CG23 659 aa17.55■□□□□ 0.4
GCN1-206ENST00000549815 C3orf67Q6ZVT6 689 aa17.55■□□□□ 0.4
GCN1-206ENST00000549815 PPP1R42Q7Z4L9 355 aa17.55■□□□□ 0.4
GCN1-206ENST00000549815 RTKN2Q8IZC4 609 aa17.55■□□□□ 0.4
GCN1-206ENST00000549815 XAGE3Q8WTP9 111 aa17.55■□□□□ 0.4
GCN1-206ENST00000549815 LAS1LQ9Y4W2 734 aaKnown RBP17.55■□□□□ 0.4
GCN1-206ENST00000549815 DDNO94850 711 aaPredicted RBP17.54■□□□□ 0.4
GCN1-206ENST00000549815 HOXB7P09629 217 aa17.54■□□□□ 0.4
GCN1-206ENST00000549815 SLC10A5Q5PT55 438 aa17.54■□□□□ 0.4
GCN1-206ENST00000549815 ZNF277Q9NRM2 450 aaPredicted RBP17.54■□□□□ 0.4
GCN1-206ENST00000549815 APAF1O14727 1248 aa17.53■□□□□ 0.4
GCN1-206ENST00000549815 HTRA3P83110 453 aa17.53■□□□□ 0.4
GCN1-206ENST00000549815 AIMP1Q12904 312 aaKnown RBP17.53■□□□□ 0.4
GCN1-206ENST00000549815 CRAMP1Q96RY5 1269 aa17.53■□□□□ 0.4
GCN1-206ENST00000549815 PSMD1Q99460 953 aa17.53■□□□□ 0.4
GCN1-206ENST00000549815 CHPF2Q9P2E5 772 aa17.53■□□□□ 0.4
GCN1-206ENST00000549815 LAMB2P55268 1798 aa17.53■□□□□ 0.4
GCN1-206ENST00000549815 RNF123Q5XPI4 1314 aa17.52■□□□□ 0.4
GCN1-206ENST00000549815 TCIRG1Q13488 830 aa17.52■□□□□ 0.4
GCN1-206ENST00000549815 HSP90AB3PQ58FF7 597 aa17.52■□□□□ 0.4
GCN1-206ENST00000549815 HDGFL1Q5TGJ6 251 aa17.52■□□□□ 0.4
GCN1-206ENST00000549815 SLC51AQ86UW1 340 aa17.52■□□□□ 0.4
GCN1-206ENST00000549815 NLRP10Q86W26 655 aa17.52■□□□□ 0.4
GCN1-206ENST00000549815 SYNE4Q8N205 404 aa17.52■□□□□ 0.4
GCN1-206ENST00000549815 RPGRQ92834 1020 aaKnown RBP17.52■□□□□ 0.4
GCN1-206ENST00000549815 UTP14AQ9BVJ6 771 aaKnown RBP17.52■□□□□ 0.4
GCN1-206ENST00000549815 MBIPQ9NS73 344 aa17.52■□□□□ 0.4
GCN1-206ENST00000549815 IARSP41252 1262 aaKnown RBP17.51■□□□□ 0.39
GCN1-206ENST00000549815 CCDC184Q52MB2 194 aa17.51■□□□□ 0.39
GCN1-206ENST00000549815 CC2D2BQ6DHV5 1058 aa17.51■□□□□ 0.39
GCN1-206ENST00000549815 RBM17Q96I25 401 aaKnown RBP17.51■□□□□ 0.39
GCN1-206ENST00000549815 L3MBTL3Q96JM7 780 aaPredicted RBP17.51■□□□□ 0.39
GCN1-206ENST00000549815 SCN4AP35499 1836 aa17.51■□□□□ 0.39
GCN1-206ENST00000549815 COL4A5P29400 1685 aa17.51■□□□□ 0.39
GCN1-206ENST00000549815 ZNF541Q9H0D2 1346 aa17.5■□□□□ 0.39
GCN1-206ENST00000549815 NLRP3Q96P20 1036 aa17.5■□□□□ 0.39
GCN1-206ENST00000549815 IFT57Q9NWB7 429 aa17.5■□□□□ 0.39
GCN1-206ENST00000549815 FZD9O00144 591 aa17.49■□□□□ 0.39
GCN1-206ENST00000549815 DUSP27Q5VZP5 1158 aa17.49■□□□□ 0.39
GCN1-206ENST00000549815 PLBD2Q8NHP8 589 aa17.49■□□□□ 0.39
GCN1-206ENST00000549815 DBF4Q9UBU7 674 aaPredicted RBP17.49■□□□□ 0.39
GCN1-206ENST00000549815 PPEF1O14829 653 aaPredicted RBP17.48■□□□□ 0.39
GCN1-206ENST00000549815 POTEIP0CG38 1075 aa17.48■□□□□ 0.39
GCN1-206ENST00000549815 POTEJP0CG39 1038 aa17.48■□□□□ 0.39
GCN1-206ENST00000549815 KLRG1Q96E93 195 aa17.48■□□□□ 0.39
GCN1-206ENST00000549815 ISCA1Q9BUE6 129 aa17.48■□□□□ 0.39
GCN1-206ENST00000549815 ABCC4O15439 1325 aa17.47■□□□□ 0.39
GCN1-206ENST00000549815 DDX60Q8IY21 1712 aaKnown RBP17.47■□□□□ 0.39
GCN1-206ENST00000549815 GNAI1P63096 354 aa17.47■□□□□ 0.39
GCN1-206ENST00000549815 GRIPAP1Q4V328 841 aa17.47■□□□□ 0.39
GCN1-206ENST00000549815 ANKRD13DQ6ZTN6 518 aa17.47■□□□□ 0.39
GCN1-206ENST00000549815 ZEB1P37275 1124 aaPredicted RBP17.46■□□□□ 0.39
GCN1-206ENST00000549815 TAF1DQ9H5J8 278 aaPredicted RBP17.46■□□□□ 0.39
GCN1-206ENST00000549815 HYPKQ9NX55 129 aa17.46■□□□□ 0.39
GCN1-206ENST00000549815 TRMT112Q9UI30 125 aaKnown RBP17.46■□□□□ 0.39
GCN1-206ENST00000549815 PCNTO95613 3336 aa17.46■□□□□ 0.39
GCN1-206ENST00000549815 SH3TC1Q8TE82 1336 aa17.46■□□□□ 0.38
GCN1-206ENST00000549815 ADAMTSL1Q8N6G6 1762 aa17.45■□□□□ 0.38
GCN1-206ENST00000549815 IQCA1LA6NCM1 817 aa17.45■□□□□ 0.38
GCN1-206ENST00000549815 HCLS1P14317 486 aaPredicted RBP17.45■□□□□ 0.38
GCN1-206ENST00000549815 CALD1Q05682 793 aaKnown RBP17.45■□□□□ 0.38
GCN1-206ENST00000549815 CHADLQ6NUI6 762 aa17.45■□□□□ 0.38
GCN1-206ENST00000549815 JMYQ8N9B5 988 aa17.45■□□□□ 0.38
GCN1-206ENST00000549815 ATP6V0A2Q9Y487 856 aa17.45■□□□□ 0.38
GCN1-206ENST00000549815 TAF1P21675 1872 aa17.44■□□□□ 0.38
GCN1-206ENST00000549815 TCERG1O14776 1098 aaKnown RBP17.44■□□□□ 0.38
GCN1-206ENST00000549815 C8orf58Q8NAV2 365 aa17.44■□□□□ 0.38
GCN1-206ENST00000549815 GPC2Q8N158 579 aa17.43■□□□□ 0.38
GCN1-206ENST00000549815 JDP2Q8WYK2 163 aa17.43■□□□□ 0.38
GCN1-206ENST00000549815 PHAXQ9H814 394 aaKnown RBP17.43■□□□□ 0.38
GCN1-206ENST00000549815 LTBP1Q14766 1721 aa17.43■□□□□ 0.38
GCN1-206ENST00000549815 ATP5J2-PTCD1G3V325 749 aa17.42■□□□□ 0.38
GCN1-206ENST00000549815 ELL2O00472 640 aaPredicted RBP17.42■□□□□ 0.38
GCN1-206ENST00000549815 BBOX1O75936 387 aa17.42■□□□□ 0.38
GCN1-206ENST00000549815 TRIM28Q13263 835 aaKnown RBP17.42■□□□□ 0.38
GCN1-206ENST00000549815 LDHDQ86WU2 507 aa17.42■□□□□ 0.38
GCN1-206ENST00000549815 SP8Q8IXZ3 490 aa17.42■□□□□ 0.38
GCN1-206ENST00000549815 ZNF428Q96B54 188 aa17.42■□□□□ 0.38
GCN1-206ENST00000549815 RTFDC1Q9BY42 306 aaPredicted RBP17.42■□□□□ 0.38
GCN1-206ENST00000549815 LRRC37AA6NMS7 1700 aa17.41■□□□□ 0.38
GCN1-206ENST00000549815 GRAPQ13588 217 aa17.41■□□□□ 0.38
GCN1-206ENST00000549815 CCDC27Q2M243 656 aa17.41■□□□□ 0.38
GCN1-206ENST00000549815 LARGE2Q8N3Y3 721 aa17.41■□□□□ 0.38
GCN1-206ENST00000549815 GRAPLQ8TC17 118 aaPredicted RBP17.41■□□□□ 0.38
GCN1-206ENST00000549815 FAM89AQ96GI7 184 aa17.41■□□□□ 0.38
GCN1-206ENST00000549815 VPS33BQ9H267 617 aa17.41■□□□□ 0.38
GCN1-206ENST00000549815 HACL1Q9UJ83 578 aa17.41■□□□□ 0.38
GCN1-206ENST00000549815 COL4A1P02462 1669 aa17.41■□□□□ 0.38
GCN1-206ENST00000549815 PASKQ96RG2 1323 aa17.41■□□□□ 0.38
GCN1-206ENST00000549815 EPHX2P34913 555 aa17.4■□□□□ 0.38
GCN1-206ENST00000549815 EIF6P56537 245 aaKnown RBP17.4■□□□□ 0.38
GCN1-206ENST00000549815 SF3B3Q15393 1217 aaKnown RBP17.4■□□□□ 0.38
GCN1-206ENST00000549815 DDX46Q7L014 1031 aaKnown RBP17.4■□□□□ 0.38
GCN1-206ENST00000549815 DUOX1Q9NRD9 1551 aa17.4■□□□□ 0.38
GCN1-206ENST00000549815 ZNF316A6NFI3 1004 aaPredicted RBP17.39■□□□□ 0.37
GCN1-206ENST00000549815 TSPYL6Q8N831 410 aa17.39■□□□□ 0.37
GCN1-206ENST00000549815 PPIP5K2O43314 1243 aa17.38■□□□□ 0.37
GCN1-206ENST00000549815 ITGBL1O95965 494 aaPredicted RBP17.38■□□□□ 0.37
GCN1-206ENST00000549815 GOLGA2Q08379 1002 aa17.38■□□□□ 0.37
GCN1-206ENST00000549815 AOC3Q16853 763 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms