RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 SENP3-EIF4A1A0A087X0R7 540 aa13.56□□□□□ -0.24
CCDC38-207ENST00000549752 ALDH1B1P30837 517 aa13.56□□□□□ -0.24
CCDC38-207ENST00000549752 PARP10Q53GL7 1025 aa13.56□□□□□ -0.24
CCDC38-207ENST00000549752 PPP1R42Q7Z4L9 355 aa13.56□□□□□ -0.24
CCDC38-207ENST00000549752 RIC1Q4ADV7 1423 aa13.56□□□□□ -0.24
CCDC38-207ENST00000549752 KLRG2A4D1S0 409 aaPredicted RBP13.55□□□□□ -0.24
CCDC38-207ENST00000549752 FAM177BA6PVY3 158 aa13.55□□□□□ -0.24
CCDC38-207ENST00000549752 APAF1O14727 1248 aa13.55□□□□□ -0.24
CCDC38-207ENST00000549752 C21orf2O43822 256 aa13.55□□□□□ -0.24
CCDC38-207ENST00000549752 GNAI1P63096 354 aa13.55□□□□□ -0.24
CCDC38-207ENST00000549752 PRPF40BQ6NWY9 871 aaKnown RBP13.55□□□□□ -0.24
CCDC38-207ENST00000549752 TTLL7Q6ZT98 887 aa13.55□□□□□ -0.24
CCDC38-207ENST00000549752 C16orf71Q8IYS4 520 aaPredicted RBP13.55□□□□□ -0.24
CCDC38-207ENST00000549752 ZBTB3Q9H5J0 574 aa13.55□□□□□ -0.24
CCDC38-207ENST00000549752 DDX21Q9NR30 783 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCDC38-207ENST00000549752 RNF123Q5XPI4 1314 aa13.55□□□□□ -0.24
CCDC38-207ENST00000549752 LTBP3Q9NS15 1303 aa13.55□□□□□ -0.24
CCDC38-207ENST00000549752 LAMB2P55268 1798 aa13.55□□□□□ -0.24
CCDC38-207ENST00000549752 RASSF7Q02833 373 aa13.54□□□□□ -0.24
CCDC38-207ENST00000549752 GSE1Q14687 1217 aa13.54□□□□□ -0.24
CCDC38-207ENST00000549752 HDGFL1Q5TGJ6 251 aa13.54□□□□□ -0.24
CCDC38-207ENST00000549752 TAOK3Q9H2K8 898 aa13.54□□□□□ -0.24
CCDC38-207ENST00000549752 IFT57Q9NWB7 429 aa13.54□□□□□ -0.24
CCDC38-207ENST00000549752 KIF3CO14782 793 aa13.53□□□□□ -0.24
CCDC38-207ENST00000549752 TOMM70O94826 608 aa13.53□□□□□ -0.24
CCDC38-207ENST00000549752 CACNB1Q02641 598 aaPredicted RBP13.53□□□□□ -0.24
CCDC38-207ENST00000549752 PDIA6Q15084 440 aa13.53□□□□□ -0.24
CCDC38-207ENST00000549752 CCDC93Q567U6 631 aa13.53□□□□□ -0.24
CCDC38-207ENST00000549752 DPY19L2Q6NUT2 758 aa13.53□□□□□ -0.24
CCDC38-207ENST00000549752 ZNF34Q8IZ26 560 aa13.53□□□□□ -0.24
CCDC38-207ENST00000549752 DBF4Q9UBU7 674 aaPredicted RBP13.53□□□□□ -0.24
CCDC38-207ENST00000549752 TAOK2Q9UL54 1235 aa13.53□□□□□ -0.24
CCDC38-207ENST00000549752 NFKBIEO00221 500 aa13.52□□□□□ -0.25
CCDC38-207ENST00000549752 GPTP24298 496 aa13.52□□□□□ -0.25
CCDC38-207ENST00000549752 GRIPAP1Q4V328 841 aa13.52□□□□□ -0.25
CCDC38-207ENST00000549752 COPS6Q7L5N1 327 aa13.52□□□□□ -0.25
CCDC38-207ENST00000549752 LRP10Q7Z4F1 713 aa13.52□□□□□ -0.25
CCDC38-207ENST00000549752 RTKN2Q8IZC4 609 aa13.52□□□□□ -0.25
CCDC38-207ENST00000549752 NECTIN2Q92692 538 aa13.52□□□□□ -0.25
CCDC38-207ENST00000549752 RPGRQ92834 1020 aaKnown RBP13.52□□□□□ -0.25
CCDC38-207ENST00000549752 HYPKQ9NX55 129 aa13.52□□□□□ -0.25
CCDC38-207ENST00000549752 SCN4AP35499 1836 aa13.52□□□□□ -0.25
CCDC38-207ENST00000549752 WDR90Q96KV7 1748 aa13.51□□□□□ -0.25
CCDC38-207ENST00000549752 UBN2Q6ZU65 1347 aa13.51□□□□□ -0.25
CCDC38-207ENST00000549752 GLTPD2A6NH11 291 aa13.51□□□□□ -0.25
CCDC38-207ENST00000549752 AIMP1Q12904 312 aaKnown RBP13.51□□□□□ -0.25
CCDC38-207ENST00000549752 ERFEQ4G0M1 354 aa13.51□□□□□ -0.25
CCDC38-207ENST00000549752 DUSP27Q5VZP5 1158 aa13.51□□□□□ -0.25
CCDC38-207ENST00000549752 CC2D2BQ6DHV5 1058 aa13.51□□□□□ -0.25
CCDC38-207ENST00000549752 NUTM1Q86Y26 1132 aa13.51□□□□□ -0.25
CCDC38-207ENST00000549752 XAGE3Q8WTP9 111 aa13.51□□□□□ -0.25
CCDC38-207ENST00000549752 NLRP3Q96P20 1036 aa13.51□□□□□ -0.25
CCDC38-207ENST00000549752 UTP14AQ9BVJ6 771 aaKnown RBP13.51□□□□□ -0.25
CCDC38-207ENST00000549752 TMX4Q9H1E5 349 aaPredicted RBP13.51□□□□□ -0.25
CCDC38-207ENST00000549752 MRS2Q9HD23 443 aa13.51□□□□□ -0.25
CCDC38-207ENST00000549752 MBIPQ9NS73 344 aa13.51□□□□□ -0.25
CCDC38-207ENST00000549752 ZNF853P0CG23 659 aa13.5□□□□□ -0.25
CCDC38-207ENST00000549752 CCDC27Q2M243 656 aa13.5□□□□□ -0.25
CCDC38-207ENST00000549752 PROSER3Q2NL68 480 aa13.5□□□□□ -0.25
CCDC38-207ENST00000549752 CRY2Q49AN0 593 aa13.5□□□□□ -0.25
CCDC38-207ENST00000549752 SUSD4Q5VX71 490 aa13.5□□□□□ -0.25
CCDC38-207ENST00000549752 RBM46Q8TBY0 533 aaKnown RBP13.5□□□□□ -0.25
CCDC38-207ENST00000549752 RBM17Q96I25 401 aaKnown RBP13.5□□□□□ -0.25
CCDC38-207ENST00000549752 NMRK2Q9NPI5 230 aa13.5□□□□□ -0.25
CCDC38-207ENST00000549752 CHPF2Q9P2E5 772 aa13.5□□□□□ -0.25
CCDC38-207ENST00000549752 CEP350Q5VT06 3117 aa13.5□□□□□ -0.25
CCDC38-207ENST00000549752 MYH3P11055 1940 aa13.49□□□□□ -0.25
CCDC38-207ENST00000549752 ABCC12Q96J65 1359 aa13.49□□□□□ -0.25
CCDC38-207ENST00000549752 NTSR2O95665 410 aa13.49□□□□□ -0.25
CCDC38-207ENST00000549752 ANXA1P04083 346 aa13.49□□□□□ -0.25
CCDC38-207ENST00000549752 HSPA6P17066 643 aa13.49□□□□□ -0.25
CCDC38-207ENST00000549752 TCIRG1Q13488 830 aa13.49□□□□□ -0.25
CCDC38-207ENST00000549752 PLBD2Q8NHP8 589 aa13.49□□□□□ -0.25
CCDC38-207ENST00000549752 DDX60Q8IY21 1712 aaKnown RBP13.49□□□□□ -0.25
CCDC38-207ENST00000549752 VEGFAP15692 232 aaPredicted RBP13.48□□□□□ -0.25
CCDC38-207ENST00000549752 HOXA10P31260 410 aaPredicted RBP13.48□□□□□ -0.25
CCDC38-207ENST00000549752 FKBP4Q02790 459 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCDC38-207ENST00000549752 KRT24Q2M2I5 525 aa13.48□□□□□ -0.25
CCDC38-207ENST00000549752 SLC10A5Q5PT55 438 aa13.48□□□□□ -0.25
CCDC38-207ENST00000549752 ANKRD13DQ6ZTN6 518 aa13.48□□□□□ -0.25
CCDC38-207ENST00000549752 C7orf43Q8WVR3 580 aa13.48□□□□□ -0.25
CCDC38-207ENST00000549752 CRAMP1Q96RY5 1269 aa13.48□□□□□ -0.25
CCDC38-207ENST00000549752 RRAGCQ9HB90 399 aa13.48□□□□□ -0.25
CCDC38-207ENST00000549752 GOLGA2Q08379 1002 aa13.47□□□□□ -0.25
CCDC38-207ENST00000549752 FSTL1Q12841 308 aa13.47□□□□□ -0.25
CCDC38-207ENST00000549752 CCDC30Q5VVM6 783 aa13.47□□□□□ -0.25
CCDC38-207ENST00000549752 NLRP10Q86W26 655 aa13.47□□□□□ -0.25
CCDC38-207ENST00000549752 TAF1P21675 1872 aa13.46□□□□□ -0.25
CCDC38-207ENST00000549752 SH3TC1Q8TE82 1336 aa13.46□□□□□ -0.25
CCDC38-207ENST00000549752 HSP90B1P14625 803 aaKnown RBP13.46□□□□□ -0.25
CCDC38-207ENST00000549752 PRELPP51888 382 aa13.46□□□□□ -0.25
CCDC38-207ENST00000549752 TRMT112Q9UI30 125 aaKnown RBP13.46□□□□□ -0.25
CCDC38-207ENST00000549752 IL16Q14005 1332 aa13.45□□□□□ -0.26
CCDC38-207ENST00000549752 DDX58O95786 925 aaKnown RBP13.45□□□□□ -0.26
CCDC38-207ENST00000549752 APLP1P51693 650 aa13.45□□□□□ -0.26
CCDC38-207ENST00000549752 SPDYE1Q8NFV5 336 aaPredicted RBP13.45□□□□□ -0.26
CCDC38-207ENST00000549752 PSMD1Q99460 953 aa13.45□□□□□ -0.26
CCDC38-207ENST00000549752 PPEF1O14829 653 aaPredicted RBP13.44□□□□□ -0.26
CCDC38-207ENST00000549752 CCDC184Q52MB2 194 aa13.44□□□□□ -0.26
CCDC38-207ENST00000549752 RIC3Q7Z5B4 369 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms