RNA–Protein interactions for RNA: ENST00000549671.5

SYT1-208, Transcript of synaptotagmin 1, humanhuman

TSL 1 (best)

Gene SYT1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-208ENST00000549671 TNFRSF25Q93038 417 aa8.97□□□□□ -0.97
SYT1-208ENST00000549671 SUV39H2Q9H5I1 410 aa8.97□□□□□ -0.97
SYT1-208ENST00000549671 NEUROD4Q9HD90 331 aa8.97□□□□□ -0.97
SYT1-208ENST00000549671 RBM19Q9Y4C8 960 aaKnown RBP8.97□□□□□ -0.97
SYT1-208ENST00000549671 POLA1P09884 1462 aaPredicted RBP8.96□□□□□ -0.97
SYT1-208ENST00000549671 GAPVD1Q14C86 1478 aa8.96□□□□□ -0.97
SYT1-208ENST00000549671 SEC13P55735 322 aa8.96□□□□□ -0.98
SYT1-208ENST00000549671 PCBP4P57723 403 aaKnown RBP8.96□□□□□ -0.98
SYT1-208ENST00000549671 HIF1AQ16665 826 aa8.96□□□□□ -0.98
SYT1-208ENST00000549671 SYT9Q86SS6 491 aa8.96□□□□□ -0.98
SYT1-208ENST00000549671 TSEN2Q8NCE0 465 aaKnown RBP8.96□□□□□ -0.98
SYT1-208ENST00000549671 PHACTR1Q9C0D0 580 aa8.96□□□□□ -0.98
SYT1-208ENST00000549671 TFIP11Q9UBB9 837 aaKnown RBP8.96□□□□□ -0.98
SYT1-208ENST00000549671 SNAPC4Q5SXM2 1469 aa8.96□□□□□ -0.98
SYT1-208ENST00000549671 MAGI1Q96QZ7 1491 aaPredicted RBP8.96□□□□□ -0.98
SYT1-208ENST00000549671 ADAM23O75077 832 aa8.95□□□□□ -0.98
SYT1-208ENST00000549671 RASA1P20936 1047 aa8.95□□□□□ -0.98
SYT1-208ENST00000549671 GRIN2CQ14957 1233 aa8.95□□□□□ -0.98
SYT1-208ENST00000549671 ZNF594Q96JF6 807 aaPredicted RBP8.95□□□□□ -0.98
SYT1-208ENST00000549671 C2orf49Q9BVC5 232 aaPredicted RBP8.95□□□□□ -0.98
SYT1-208ENST00000549671 PRDM6Q9NQX0 595 aa8.95□□□□□ -0.98
SYT1-208ENST00000549671 SFI1A8K8P3 1242 aa8.94□□□□□ -0.98
SYT1-208ENST00000549671 TYRO3Q06418 890 aa8.94□□□□□ -0.98
SYT1-208ENST00000549671 PPP1R12CQ9BZL4 782 aa8.94□□□□□ -0.98
SYT1-208ENST00000549671 EFCC1Q9HA90 598 aa8.94□□□□□ -0.98
SYT1-208ENST00000549671 FAM196BA6NMK8 535 aa8.93□□□□□ -0.98
SYT1-208ENST00000549671 PPP1R12BO60237 982 aaPredicted RBP8.93□□□□□ -0.98
SYT1-208ENST00000549671 ALAS2P22557 587 aa8.93□□□□□ -0.98
SYT1-208ENST00000549671 SFSWAPQ12872 951 aaKnown RBP8.93□□□□□ -0.98
SYT1-208ENST00000549671 NEUROD1Q13562 356 aa8.93□□□□□ -0.98
SYT1-208ENST00000549671 KANK4Q5T7N3 995 aaPredicted RBP8.93□□□□□ -0.98
SYT1-208ENST00000549671 IER5Q5VY09 327 aa8.93□□□□□ -0.98
SYT1-208ENST00000549671 SUSD3Q96L08 255 aa8.93□□□□□ -0.98
SYT1-208ENST00000549671 BRD7Q9NPI1 651 aa8.93□□□□□ -0.98
SYT1-208ENST00000549671 ATAD2Q6PL18 1390 aa8.92□□□□□ -0.98
SYT1-208ENST00000549671 SPEM2Q0P670 501 aa8.92□□□□□ -0.98
SYT1-208ENST00000549671 PTK7Q13308 1070 aa8.92□□□□□ -0.98
SYT1-208ENST00000549671 TRIM11Q96F44 468 aa8.92□□□□□ -0.98
SYT1-208ENST00000549671 SLC30A3Q99726 388 aa8.92□□□□□ -0.98
SYT1-208ENST00000549671 CCDC88BA6NC98 1476 aa8.91□□□□□ -0.98
SYT1-208ENST00000549671 SYNJ2O15056 1496 aa8.91□□□□□ -0.98
SYT1-208ENST00000549671 BAG6P46379 1132 aa8.91□□□□□ -0.98
SYT1-208ENST00000549671 LARP1Q6PKG0 1096 aaKnown RBP8.91□□□□□ -0.98
SYT1-208ENST00000549671 ALDH16A1Q8IZ83 802 aa8.91□□□□□ -0.98
SYT1-208ENST00000549671 CALR3Q96L12 384 aaKnown RBP8.91□□□□□ -0.98
SYT1-208ENST00000549671 HCN4Q9Y3Q4 1203 aa8.91□□□□□ -0.98
SYT1-208ENST00000549671 TDRD9Q8NDG6 1382 aaKnown RBP8.9□□□□□ -0.98
SYT1-208ENST00000549671 SPDYE3A6NKU9 549 aa8.9□□□□□ -0.98
SYT1-208ENST00000549671 SPATA31C1P0DKV0 1188 aa8.9□□□□□ -0.98
SYT1-208ENST00000549671 IGFBP4P22692 258 aa8.9□□□□□ -0.98
SYT1-208ENST00000549671 HSH2DQ96JZ2 352 aa8.9□□□□□ -0.98
SYT1-208ENST00000549671 CEP63Q96MT8 703 aa8.9□□□□□ -0.98
SYT1-208ENST00000549671 KCNH4Q9UQ05 1017 aa8.9□□□□□ -0.98
SYT1-208ENST00000549671 RAD54L2Q9Y4B4 1467 aa8.89□□□□□ -0.99
SYT1-208ENST00000549671 KIF13AQ9H1H9 1805 aa8.89□□□□□ -0.99
SYT1-208ENST00000549671 RTN1Q16799 776 aa8.89□□□□□ -0.99
SYT1-208ENST00000549671 CRTC2Q53ET0 693 aaPredicted RBP8.89□□□□□ -0.99
SYT1-208ENST00000549671 CD163Q86VB7 1156 aa8.89□□□□□ -0.99
SYT1-208ENST00000549671 ZNF280CQ8ND82 737 aa8.89□□□□□ -0.99
SYT1-208ENST00000549671 SCG3Q8WXD2 468 aaKnown RBP8.89□□□□□ -0.99
SYT1-208ENST00000549671 GRIN2BQ13224 1484 aa8.89□□□□□ -0.99
SYT1-208ENST00000549671 C1QTNF9BB2RNN3 333 aa8.88□□□□□ -0.99
SYT1-208ENST00000549671 USP17L15C9J2P7 530 aa8.88□□□□□ -0.99
SYT1-208ENST00000549671 USP17L10C9JJH3 530 aa8.88□□□□□ -0.99
SYT1-208ENST00000549671 USP17L13C9JLJ4 530 aa8.88□□□□□ -0.99
SYT1-208ENST00000549671 USP17L12C9JPN9 530 aa8.88□□□□□ -0.99
SYT1-208ENST00000549671 USP17L11C9JVI0 530 aa8.88□□□□□ -0.99
SYT1-208ENST00000549671 USP17L21D6R901 530 aa8.88□□□□□ -0.99
SYT1-208ENST00000549671 USP17L18D6R9N7 530 aa8.88□□□□□ -0.99
SYT1-208ENST00000549671 USP17L22D6RA61 530 aa8.88□□□□□ -0.99
SYT1-208ENST00000549671 USP17L17D6RBQ6 530 aa8.88□□□□□ -0.99
SYT1-208ENST00000549671 USP17L19D6RCP7 530 aa8.88□□□□□ -0.99
SYT1-208ENST00000549671 USP17L20D6RJB6 530 aa8.88□□□□□ -0.99
SYT1-208ENST00000549671 USP17L24Q0WX57 530 aa8.88□□□□□ -0.99
SYT1-208ENST00000549671 BTLAQ7Z6A9 289 aa8.88□□□□□ -0.99
SYT1-208ENST00000549671 CHMP7Q8WUX9 453 aaPredicted RBP8.88□□□□□ -0.99
SYT1-208ENST00000549671 SOGA1O94964 1423 aa8.88□□□□□ -0.99
SYT1-208ENST00000549671 K7ELQ4 463 aaPredicted RBP8.87□□□□□ -0.99
SYT1-208ENST00000549671 DPYDQ12882 1025 aa8.87□□□□□ -0.99
SYT1-208ENST00000549671 COL9A3Q14050 684 aaPredicted RBP8.87□□□□□ -0.99
SYT1-208ENST00000549671 C14orf37Q86TY3 774 aa8.87□□□□□ -0.99
SYT1-208ENST00000549671 ANKMY2Q8IV38 441 aa8.87□□□□□ -0.99
SYT1-208ENST00000549671 PLVAPQ9BX97 442 aa8.87□□□□□ -0.99
SYT1-208ENST00000549671 STARD13Q9Y3M8 1113 aa8.87□□□□□ -0.99
SYT1-208ENST00000549671 TGFBR3LH3BV60 316 aa8.86□□□□□ -0.99
SYT1-208ENST00000549671 ADH7P40394 386 aa8.86□□□□□ -0.99
SYT1-208ENST00000549671 CHRNA4P43681 627 aa8.86□□□□□ -0.99
SYT1-208ENST00000549671 ARXQ96QS3 562 aa8.86□□□□□ -0.99
SYT1-208ENST00000549671 VRTNQ9H8Y1 702 aa8.86□□□□□ -0.99
SYT1-208ENST00000549671 C11orf16Q9NQ32 467 aa8.86□□□□□ -0.99
SYT1-208ENST00000549671 ERCC6L2Q5T890 1561 aa8.86□□□□□ -0.99
SYT1-208ENST00000549671 MICALL1Q8N3F8 863 aa8.85□□□□□ -0.99
SYT1-208ENST00000549671 DMGDHQ9UI17 866 aaKnown RBP8.85□□□□□ -0.99
SYT1-208ENST00000549671 M0R082 166 aa8.84□□□□□ -0.99
SYT1-208ENST00000549671 FOXO3O43524 673 aa8.84□□□□□ -0.99
SYT1-208ENST00000549671 C20orf204Q6ZNR8 217 aa8.84□□□□□ -0.99
SYT1-208ENST00000549671 ERICH6Q7L0X2 663 aa8.84□□□□□ -0.99
SYT1-208ENST00000549671 ZNF417Q8TAU3 575 aa8.84□□□□□ -0.99
SYT1-208ENST00000549671 ZNF587Q96SQ5 575 aaPredicted RBP8.84□□□□□ -0.99
SYT1-208ENST00000549671 ALBP02768 609 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms