RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 ERVV-2B6SEH9 535 aa9.01□□□□□ -0.97
TMEM116-208ENST00000549537 COL5A3P25940 1745 aaPredicted RBP9.01□□□□□ -0.97
TMEM116-208ENST00000549537 TJAP1Q5JTD0 557 aa9.01□□□□□ -0.97
TMEM116-208ENST00000549537 ZNF530Q6P9A1 599 aaPredicted RBP9.01□□□□□ -0.97
TMEM116-208ENST00000549537 SAMD7Q7Z3H4 446 aa9.01□□□□□ -0.97
TMEM116-208ENST00000549537 DCAF5Q96JK2 942 aa9.01□□□□□ -0.97
TMEM116-208ENST00000549537 FHDC1Q9C0D6 1143 aaPredicted RBP9.01□□□□□ -0.97
TMEM116-208ENST00000549537 CICQ96RK0 1608 aaPredicted RBP9.01□□□□□ -0.97
TMEM116-208ENST00000549537 LOC102724428A0A0B4J2F2 783 aa9□□□□□ -0.97
TMEM116-208ENST00000549537 HSP90AB1P08238 724 aaKnown RBP9□□□□□ -0.97
TMEM116-208ENST00000549537 SIK1P57059 783 aa9□□□□□ -0.97
TMEM116-208ENST00000549537 ITPK1Q13572 414 aa9□□□□□ -0.97
TMEM116-208ENST00000549537 LINC00116Q8NCU8 138 aa9□□□□□ -0.97
TMEM116-208ENST00000549537 SLC4A9Q96Q91 983 aa9□□□□□ -0.97
TMEM116-208ENST00000549537 SYT17Q9BSW7 474 aa9□□□□□ -0.97
TMEM116-208ENST00000549537 PRKD2Q9BZL6 878 aa9□□□□□ -0.97
TMEM116-208ENST00000549537 MRC1P22897 1456 aa9□□□□□ -0.97
TMEM116-208ENST00000549537 VIRMAQ69YN4 1812 aaKnown RBP8.99□□□□□ -0.97
TMEM116-208ENST00000549537 NRG2O14511 850 aaPredicted RBP8.99□□□□□ -0.97
TMEM116-208ENST00000549537 DIAPH1O60610 1272 aaKnown RBP8.99□□□□□ -0.97
TMEM116-208ENST00000549537 HMGB2P26583 209 aaKnown RBP8.99□□□□□ -0.97
TMEM116-208ENST00000549537 C1QTNF8P60827 252 aa8.99□□□□□ -0.97
TMEM116-208ENST00000549537 TATDN2Q93075 761 aa8.99□□□□□ -0.97
TMEM116-208ENST00000549537 MTRQ99707 1265 aa8.98□□□□□ -0.97
TMEM116-208ENST00000549537 RBM27Q9P2N5 1060 aaKnown RBP8.98□□□□□ -0.97
TMEM116-208ENST00000549537 PNMA3Q9UL41 463 aa8.98□□□□□ -0.97
TMEM116-208ENST00000549537 TJP1Q07157 1748 aa8.97□□□□□ -0.97
TMEM116-208ENST00000549537 HMOX1P09601 288 aa8.97□□□□□ -0.97
TMEM116-208ENST00000549537 SSFA2P28290 1259 aa8.97□□□□□ -0.97
TMEM116-208ENST00000549537 GGCXP38435 758 aa8.97□□□□□ -0.97
TMEM116-208ENST00000549537 ATP6V1AP38606 617 aa8.97□□□□□ -0.97
TMEM116-208ENST00000549537 SLC4A3P48751 1232 aa8.97□□□□□ -0.97
TMEM116-208ENST00000549537 MTHFSDQ2M296 383 aaKnown RBP8.97□□□□□ -0.97
TMEM116-208ENST00000549537 AKAP4Q5JQC9 854 aa8.97□□□□□ -0.97
TMEM116-208ENST00000549537 C1orf141Q5JVX7 400 aa8.97□□□□□ -0.97
TMEM116-208ENST00000549537 SMIM5Q71RC9 77 aa8.97□□□□□ -0.97
TMEM116-208ENST00000549537 FLAD1Q8NFF5 587 aa8.97□□□□□ -0.97
TMEM116-208ENST00000549537 AK7Q96M32 723 aa8.97□□□□□ -0.97
TMEM116-208ENST00000549537 MYH14Q7Z406 1995 aaKnown RBP8.97□□□□□ -0.97
TMEM116-208ENST00000549537 SENP3-EIF4A1A0A087X0R7 540 aa8.96□□□□□ -0.98
TMEM116-208ENST00000549537 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.96□□□□□ -0.98
TMEM116-208ENST00000549537 POLD1P28340 1107 aa8.96□□□□□ -0.98
TMEM116-208ENST00000549537 CABP4P57796 275 aa8.96□□□□□ -0.98
TMEM116-208ENST00000549537 MSL1Q68DK7 614 aa8.96□□□□□ -0.98
TMEM116-208ENST00000549537 PPP1R18Q6NYC8 613 aa8.96□□□□□ -0.98
TMEM116-208ENST00000549537 NFATC2IPQ8NCF5 419 aa8.96□□□□□ -0.98
TMEM116-208ENST00000549537 LGR6Q9HBX8 967 aa8.96□□□□□ -0.98
TMEM116-208ENST00000549537 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.96□□□□□ -0.98
TMEM116-208ENST00000549537 ARIH1Q9Y4X5 557 aaPredicted RBP8.96□□□□□ -0.98
TMEM116-208ENST00000549537 KCPQ6ZWJ8 1503 aa8.95□□□□□ -0.98
TMEM116-208ENST00000549537 C4AP0C0L4 1744 aa8.95□□□□□ -0.98
TMEM116-208ENST00000549537 SIPA1L3O60292 1781 aaPredicted RBP8.95□□□□□ -0.98
TMEM116-208ENST00000549537 UBR2Q8IWV8 1755 aa8.95□□□□□ -0.98
TMEM116-208ENST00000549537 SMAPO00193 183 aa8.95□□□□□ -0.98
TMEM116-208ENST00000549537 PPP2R1AP30153 589 aa8.95□□□□□ -0.98
TMEM116-208ENST00000549537 CNGB1Q14028 1251 aaPredicted RBP8.95□□□□□ -0.98
TMEM116-208ENST00000549537 RC3H1Q5TC82 1133 aaKnown RBP8.95□□□□□ -0.98
TMEM116-208ENST00000549537 NLGN2Q8NFZ4 835 aa8.95□□□□□ -0.98
TMEM116-208ENST00000549537 SLC52A2Q9HAB3 445 aa8.95□□□□□ -0.98
TMEM116-208ENST00000549537 CNTNAP4Q9C0A0 1308 aa8.95□□□□□ -0.98
TMEM116-208ENST00000549537 PCNTO95613 3336 aa8.94□□□□□ -0.98
TMEM116-208ENST00000549537 GNPATO15228 680 aa8.94□□□□□ -0.98
TMEM116-208ENST00000549537 RNMTO43148 476 aaKnown RBP8.94□□□□□ -0.98
TMEM116-208ENST00000549537 GRXCR2A6NFK2 248 aa8.93□□□□□ -0.98
TMEM116-208ENST00000549537 RNF40O75150 1001 aa8.93□□□□□ -0.98
TMEM116-208ENST00000549537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.93□□□□□ -0.98
TMEM116-208ENST00000549537 RSPH6AQ9H0K4 717 aa8.93□□□□□ -0.98
TMEM116-208ENST00000549537 KIAA1551Q9HCM1 1747 aa8.92□□□□□ -0.98
TMEM116-208ENST00000549537 CEMIPQ8WUJ3 1361 aa8.92□□□□□ -0.98
TMEM116-208ENST00000549537 U2SURPO15042 1029 aaKnown RBP8.92□□□□□ -0.98
TMEM116-208ENST00000549537 PTCD1O75127 700 aaKnown RBP8.92□□□□□ -0.98
TMEM116-208ENST00000549537 RPS6KA4O75676 772 aa8.92□□□□□ -0.98
TMEM116-208ENST00000549537 NUDT18Q6ZVK8 323 aa8.92□□□□□ -0.98
TMEM116-208ENST00000549537 SLF2Q8IX21 1173 aa8.92□□□□□ -0.98
TMEM116-208ENST00000549537 PHACTR3Q96KR7 559 aa8.92□□□□□ -0.98
TMEM116-208ENST00000549537 TMUB1Q9BVT8 246 aa8.92□□□□□ -0.98
TMEM116-208ENST00000549537 CD2APQ9Y5K6 639 aa8.92□□□□□ -0.98
TMEM116-208ENST00000549537 KIF13BQ9NQT8 1826 aa8.91□□□□□ -0.98
TMEM116-208ENST00000549537 TESPA1A2RU30 521 aaPredicted RBP8.91□□□□□ -0.98
TMEM116-208ENST00000549537 CRKLP46109 303 aaKnown RBP8.91□□□□□ -0.98
TMEM116-208ENST00000549537 SLC39A6Q13433 755 aa8.91□□□□□ -0.98
TMEM116-208ENST00000549537 INTS5Q6P9B9 1019 aaKnown RBP8.91□□□□□ -0.98
TMEM116-208ENST00000549537 IL17REQ8NFR9 667 aa8.91□□□□□ -0.98
TMEM116-208ENST00000549537 CFAP53Q96M91 514 aa8.91□□□□□ -0.98
TMEM116-208ENST00000549537 PRR14Q9BWN1 585 aa8.91□□□□□ -0.98
TMEM116-208ENST00000549537 FAM198AQ9UFP1 575 aa8.91□□□□□ -0.98
TMEM116-208ENST00000549537 RTCBQ9Y3I0 505 aaKnown RBP8.91□□□□□ -0.98
TMEM116-208ENST00000549537 GNAT3A8MTJ3 354 aa8.9□□□□□ -0.98
TMEM116-208ENST00000549537 YBX3P16989 372 aaKnown RBP eCLIP8.9□□□□□ -0.986e-6■□□□□ 10.9
TMEM116-208ENST00000549537 PRKAR2BP31323 418 aa8.9□□□□□ -0.98
TMEM116-208ENST00000549537 TRAPPC3LQ5T215 181 aa8.9□□□□□ -0.98
TMEM116-208ENST00000549537 DNAJC10Q8IXB1 793 aa8.9□□□□□ -0.98
TMEM116-208ENST00000549537 GAS2L2Q8NHY3 880 aa8.9□□□□□ -0.98
TMEM116-208ENST00000549537 SEMA3EO15041 775 aa8.89□□□□□ -0.99
TMEM116-208ENST00000549537 MMP10P09238 476 aa8.89□□□□□ -0.99
TMEM116-208ENST00000549537 CYP19A1P11511 503 aaPredicted RBP8.89□□□□□ -0.99
TMEM116-208ENST00000549537 GYS1P13807 737 aa8.89□□□□□ -0.99
TMEM116-208ENST00000549537 PDZRN3Q9UPQ7 1066 aa8.89□□□□□ -0.99
TMEM116-208ENST00000549537 C10orf71Q711Q0 1435 aa8.88□□□□□ -0.99
TMEM116-208ENST00000549537 SOS1Q07889 1333 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms