RNA–Protein interactions for RNA: ENST00000549040.5

RFX4-208, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 473 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-208ENST00000549040 SHANK3Q9BYB0 1731 aa10.6□□□□□ -0.71
RFX4-208ENST00000549040 IL16Q14005 1332 aa10.59□□□□□ -0.71
RFX4-208ENST00000549040 RGS12O14924 1447 aa10.59□□□□□ -0.71
RFX4-208ENST00000549040 PARP4Q9UKK3 1724 aaKnown RBP10.59□□□□□ -0.71
RFX4-208ENST00000549040 A0A0G2JS52 829 aa10.59□□□□□ -0.71
RFX4-208ENST00000549040 RCCD1A6NED2 376 aa10.59□□□□□ -0.71
RFX4-208ENST00000549040 KCNQ2O43526 872 aa10.59□□□□□ -0.71
RFX4-208ENST00000549040 HSP90AB1P08238 724 aaKnown RBP10.59□□□□□ -0.71
RFX4-208ENST00000549040 MYT1Q01538 1121 aa10.59□□□□□ -0.71
RFX4-208ENST00000549040 TAF7Q15545 349 aaPredicted RBP10.59□□□□□ -0.71
RFX4-208ENST00000549040 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.59□□□□□ -0.71
RFX4-208ENST00000549040 KRT27Q7Z3Y8 459 aa10.59□□□□□ -0.71
RFX4-208ENST00000549040 SLF2Q8IX21 1173 aa10.59□□□□□ -0.71
RFX4-208ENST00000549040 PXYLP1Q8TE99 480 aa10.59□□□□□ -0.71
RFX4-208ENST00000549040 SLC52A2Q9HAB3 445 aa10.59□□□□□ -0.71
RFX4-208ENST00000549040 LRRC37A3O60309 1634 aa10.58□□□□□ -0.72
RFX4-208ENST00000549040 WNK3Q9BYP7 1800 aa10.58□□□□□ -0.72
RFX4-208ENST00000549040 ADAMTS7Q9UKP4 1686 aa10.58□□□□□ -0.72
RFX4-208ENST00000549040 KCNQ3O43525 872 aa10.58□□□□□ -0.72
RFX4-208ENST00000549040 SLC4A3P48751 1232 aa10.58□□□□□ -0.72
RFX4-208ENST00000549040 PIGBQ92521 554 aa10.58□□□□□ -0.72
RFX4-208ENST00000549040 TMEM134Q9H6X4 195 aa10.58□□□□□ -0.72
RFX4-208ENST00000549040 BCL9O00512 1426 aa10.58□□□□□ -0.72
RFX4-208ENST00000549040 RNF40O75150 1001 aa10.57□□□□□ -0.72
RFX4-208ENST00000549040 IFFO2Q5TF58 517 aa10.57□□□□□ -0.72
RFX4-208ENST00000549040 DUSP27Q5VZP5 1158 aa10.57□□□□□ -0.72
RFX4-208ENST00000549040 NECTIN2Q92692 538 aa10.57□□□□□ -0.72
RFX4-208ENST00000549040 ACSBG1Q96GR2 724 aa10.57□□□□□ -0.72
RFX4-208ENST00000549040 MBIPQ9NS73 344 aa10.57□□□□□ -0.72
RFX4-208ENST00000549040 IFT57Q9NWB7 429 aa10.57□□□□□ -0.72
RFX4-208ENST00000549040 DLG5Q8TDM6 1919 aa10.56□□□□□ -0.72
RFX4-208ENST00000549040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.56□□□□□ -0.72
RFX4-208ENST00000549040 CABP4P57796 275 aa10.56□□□□□ -0.72
RFX4-208ENST00000549040 METTL3Q86U44 580 aaKnown RBP10.56□□□□□ -0.72
RFX4-208ENST00000549040 BABAM1Q9NWV8 329 aa10.56□□□□□ -0.72
RFX4-208ENST00000549040 BTBD11A6QL63 1104 aa10.55□□□□□ -0.72
RFX4-208ENST00000549040 E9PSI1 815 aa10.55□□□□□ -0.72
RFX4-208ENST00000549040 ITGBL1O95965 494 aaPredicted RBP10.55□□□□□ -0.72
RFX4-208ENST00000549040 GNAI1P63096 354 aa10.55□□□□□ -0.72
RFX4-208ENST00000549040 CALD1Q05682 793 aaKnown RBP10.55□□□□□ -0.72
RFX4-208ENST00000549040 TEFQ10587 303 aa10.55□□□□□ -0.72
RFX4-208ENST00000549040 SLC39A6Q13433 755 aa10.55□□□□□ -0.72
RFX4-208ENST00000549040 FAM196AQ6ZSG2 479 aa10.55□□□□□ -0.72
RFX4-208ENST00000549040 TSR2Q969E8 191 aaKnown RBP10.55□□□□□ -0.72
RFX4-208ENST00000549040 ATG3Q9NT62 314 aa10.55□□□□□ -0.72
RFX4-208ENST00000549040 ASAP1Q9ULH1 1129 aa10.55□□□□□ -0.72
RFX4-208ENST00000549040 LAS1LQ9Y4W2 734 aaKnown RBP10.55□□□□□ -0.72
RFX4-208ENST00000549040 MRC1P22897 1456 aa10.55□□□□□ -0.72
RFX4-208ENST00000549040 EIF4A1P60842 406 aaKnown RBP10.54□□□□□ -0.72
RFX4-208ENST00000549040 KRT24Q2M2I5 525 aa10.54□□□□□ -0.72
RFX4-208ENST00000549040 C8orf58Q8NAV2 365 aa10.54□□□□□ -0.72
RFX4-208ENST00000549040 FANCIQ9NVI1 1328 aa10.54□□□□□ -0.72
RFX4-208ENST00000549040 SRCAPQ6ZRS2 3230 aa10.54□□□□□ -0.72
RFX4-208ENST00000549040 HEG1Q9ULI3 1381 aa10.53□□□□□ -0.72
RFX4-208ENST00000549040 ZNF790Q6PG37 636 aa10.53□□□□□ -0.72
RFX4-208ENST00000549040 TSPYL6Q8N831 410 aa10.53□□□□□ -0.72
RFX4-208ENST00000549040 SLC4A9Q96Q91 983 aa10.53□□□□□ -0.72
RFX4-208ENST00000549040 TMOD3Q9NYL9 352 aa10.53□□□□□ -0.72
RFX4-208ENST00000549040 TSPYL4Q9UJ04 414 aa10.53□□□□□ -0.72
RFX4-208ENST00000549040 BRWD3Q6RI45 1802 aa10.53□□□□□ -0.72
RFX4-208ENST00000549040 TOGARAM1Q9Y4F4 1720 aa10.53□□□□□ -0.72
RFX4-208ENST00000549040 SCN11AQ9UI33 1791 aa10.52□□□□□ -0.72
RFX4-208ENST00000549040 EXOSC9Q06265 439 aaKnown RBP10.52□□□□□ -0.73
RFX4-208ENST00000549040 SYTL4Q96C24 671 aaPredicted RBP10.52□□□□□ -0.73
RFX4-208ENST00000549040 ZNF496Q96IT1 587 aaPredicted RBP10.52□□□□□ -0.73
RFX4-208ENST00000549040 MYH16Q9H6N6 1097 aa10.52□□□□□ -0.73
RFX4-208ENST00000549040 PRAMEF22A3QJZ6 481 aa10.51□□□□□ -0.73
RFX4-208ENST00000549040 VAMP4O75379 141 aa10.51□□□□□ -0.73
RFX4-208ENST00000549040 TRIM37O94972 964 aa10.51□□□□□ -0.73
RFX4-208ENST00000549040 APLP1P51693 650 aa10.51□□□□□ -0.73
RFX4-208ENST00000549040 KCNC4Q03721 635 aa10.51□□□□□ -0.73
RFX4-208ENST00000549040 SIPA1L3O60292 1781 aaPredicted RBP10.5□□□□□ -0.73
RFX4-208ENST00000549040 ELL2O00472 640 aaPredicted RBP10.5□□□□□ -0.73
RFX4-208ENST00000549040 GIGYF1O75420 1035 aaPredicted RBP10.5□□□□□ -0.73
RFX4-208ENST00000549040 PTCD1O75127 700 aaKnown RBP10.49□□□□□ -0.73
RFX4-208ENST00000549040 MAP2K5Q13163 448 aa10.49□□□□□ -0.73
RFX4-208ENST00000549040 USP16Q9Y5T5 823 aa10.49□□□□□ -0.73
RFX4-208ENST00000549040 IRF6O14896 467 aa10.48□□□□□ -0.73
RFX4-208ENST00000549040 TJAP1Q5JTD0 557 aa10.48□□□□□ -0.73
RFX4-208ENST00000549040 KCPQ6ZWJ8 1503 aa10.48□□□□□ -0.73
RFX4-208ENST00000549040 KCNQ4P56696 695 aa10.47□□□□□ -0.73
RFX4-208ENST00000549040 TWISTNBQ3B726 338 aaPredicted RBP10.47□□□□□ -0.73
RFX4-208ENST00000549040 SMARCC1Q92922 1105 aaPredicted RBP10.47□□□□□ -0.73
RFX4-208ENST00000549040 FMNL2Q96PY5 1086 aa10.47□□□□□ -0.73
RFX4-208ENST00000549040 PHOX2BQ99453 314 aa10.47□□□□□ -0.73
RFX4-208ENST00000549040 PRR14Q9BWN1 585 aa10.47□□□□□ -0.73
RFX4-208ENST00000549040 DAXXQ9UER7 740 aaPredicted RBP10.47□□□□□ -0.73
RFX4-208ENST00000549040 ITGB4P16144 1822 aa10.47□□□□□ -0.73
RFX4-208ENST00000549040 LOC102724428A0A0B4J2F2 783 aa10.46□□□□□ -0.73
RFX4-208ENST00000549040 PLSCR1O15162 318 aa10.46□□□□□ -0.73
RFX4-208ENST00000549040 SNRPA1P09661 255 aaKnown RBP10.46□□□□□ -0.73
RFX4-208ENST00000549040 SIK1P57059 783 aa10.46□□□□□ -0.73
RFX4-208ENST00000549040 ITPK1Q13572 414 aa10.46□□□□□ -0.73
RFX4-208ENST00000549040 TTC5Q8N0Z6 440 aa10.46□□□□□ -0.73
RFX4-208ENST00000549040 LRRC4BQ9NT99 713 aa10.46□□□□□ -0.73
RFX4-208ENST00000549040 PALLDQ8WX93 1383 aa10.46□□□□□ -0.74
RFX4-208ENST00000549040 DOT1LQ8TEK3 1739 aa10.46□□□□□ -0.74
RFX4-208ENST00000549040 SBF2Q86WG5 1849 aa10.45□□□□□ -0.74
RFX4-208ENST00000549040 KDM3BQ7LBC6 1761 aa10.45□□□□□ -0.74
RFX4-208ENST00000549040 NHSQ6T4R5 1651 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms