RNA–Protein interactions for RNA: ENST00000548586.5

PPFIA2-211, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA2, Length 4,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-211ENST00000548586 USP16Q9Y5T5 823 aa13.56□□□□□ -0.24
PPFIA2-211ENST00000548586 ZC3H13Q5T200 1668 aaKnown RBP13.56□□□□□ -0.24
PPFIA2-211ENST00000548586 SMTNL1A8MU46 457 aa13.56□□□□□ -0.24
PPFIA2-211ENST00000548586 TTC14Q96N46 770 aa13.56□□□□□ -0.24
PPFIA2-211ENST00000548586 JAK2O60674 1132 aa13.56□□□□□ -0.24
PPFIA2-211ENST00000548586 NEXNQ0ZGT2 675 aa13.56□□□□□ -0.24
PPFIA2-211ENST00000548586 GNL2Q13823 731 aaKnown RBP13.56□□□□□ -0.24
PPFIA2-211ENST00000548586 ZSCAN25Q6NSZ9 544 aa13.56□□□□□ -0.24
PPFIA2-211ENST00000548586 FAM177A1Q8N128 213 aaPredicted RBP13.56□□□□□ -0.24
PPFIA2-211ENST00000548586 CCAR2Q8N163 923 aaKnown RBP13.56□□□□□ -0.24
PPFIA2-211ENST00000548586 TRERF1Q96PN7 1200 aa13.56□□□□□ -0.24
PPFIA2-211ENST00000548586 SPTLC3Q9NUV7 552 aa13.56□□□□□ -0.24
PPFIA2-211ENST00000548586 LMTK2Q8IWU2 1503 aa13.56□□□□□ -0.24
PPFIA2-211ENST00000548586 USP32Q8NFA0 1604 aa13.56□□□□□ -0.24
PPFIA2-211ENST00000548586 MYL6BP14649 208 aa13.55□□□□□ -0.24
PPFIA2-211ENST00000548586 TPM4P67936 248 aa13.55□□□□□ -0.24
PPFIA2-211ENST00000548586 LEO1Q8WVC0 666 aaPredicted RBP13.55□□□□□ -0.24
PPFIA2-211ENST00000548586 ATP7BP35670 1465 aa13.55□□□□□ -0.24
PPFIA2-211ENST00000548586 AOX1Q06278 1338 aa13.55□□□□□ -0.24
PPFIA2-211ENST00000548586 KLHDC4Q8TBB5 520 aa13.55□□□□□ -0.24
PPFIA2-211ENST00000548586 PAXBP1Q9Y5B6 917 aa13.55□□□□□ -0.24
PPFIA2-211ENST00000548586 NEXMIFQ5QGS0 1516 aa13.55□□□□□ -0.24
PPFIA2-211ENST00000548586 EDC3Q96F86 508 aaKnown RBP13.55□□□□□ -0.24
PPFIA2-211ENST00000548586 BIN1O00499 593 aa13.55□□□□□ -0.24
PPFIA2-211ENST00000548586 DDX58O95786 925 aaKnown RBP13.55□□□□□ -0.24
PPFIA2-211ENST00000548586 CCAR1Q8IX12 1150 aaKnown RBP13.55□□□□□ -0.24
PPFIA2-211ENST00000548586 NDUFB9Q9Y6M9 179 aa13.55□□□□□ -0.24
PPFIA2-211ENST00000548586 MLH3Q9UHC1 1453 aa13.54□□□□□ -0.24
PPFIA2-211ENST00000548586 SLC27A2O14975 620 aa13.54□□□□□ -0.24
PPFIA2-211ENST00000548586 KIF18AQ8NI77 898 aa13.54□□□□□ -0.24
PPFIA2-211ENST00000548586 OGFRQ9NZT2 677 aa13.54□□□□□ -0.24
PPFIA2-211ENST00000548586 CEP57L1Q8IYX8 460 aa13.54□□□□□ -0.24
PPFIA2-211ENST00000548586 CACTINQ8WUQ7 758 aaKnown RBP13.54□□□□□ -0.24
PPFIA2-211ENST00000548586 ZSWIM6Q9HCJ5 1215 aa13.54□□□□□ -0.24
PPFIA2-211ENST00000548586 TTC41PQ6P2S7 1318 aa13.54□□□□□ -0.24
PPFIA2-211ENST00000548586 ISM2Q6H9L7 571 aa13.54□□□□□ -0.24
PPFIA2-211ENST00000548586 KCNQ3O43525 872 aa13.53□□□□□ -0.24
PPFIA2-211ENST00000548586 KIF20AO95235 890 aa13.53□□□□□ -0.24
PPFIA2-211ENST00000548586 FEZ1Q99689 392 aa13.53□□□□□ -0.24
PPFIA2-211ENST00000548586 NAT10Q9H0A0 1025 aaKnown RBP13.53□□□□□ -0.24
PPFIA2-211ENST00000548586 LGR6Q9HBX8 967 aa13.53□□□□□ -0.24
PPFIA2-211ENST00000548586 FLT4P35916 1363 aa13.53□□□□□ -0.24
PPFIA2-211ENST00000548586 NEURL4Q96JN8 1562 aa13.53□□□□□ -0.24
PPFIA2-211ENST00000548586 KIDINS220Q9ULH0 1771 aa13.53□□□□□ -0.24
PPFIA2-211ENST00000548586 CCDC69A6NI79 296 aa13.53□□□□□ -0.24
PPFIA2-211ENST00000548586 ARID5BQ14865 1188 aa13.53□□□□□ -0.24
PPFIA2-211ENST00000548586 UTP14CQ5TAP6 766 aaKnown RBP13.53□□□□□ -0.24
PPFIA2-211ENST00000548586 FSIP1Q8NA03 581 aa13.53□□□□□ -0.24
PPFIA2-211ENST00000548586 MNS1Q8NEH6 495 aa13.53□□□□□ -0.24
PPFIA2-211ENST00000548586 REREQ9P2R6 1566 aa13.52□□□□□ -0.24
PPFIA2-211ENST00000548586 STK38Q15208 465 aa13.52□□□□□ -0.24
PPFIA2-211ENST00000548586 NEK1Q96PY6 1258 aa13.52□□□□□ -0.24
PPFIA2-211ENST00000548586 CLSTN2Q9H4D0 955 aa13.52□□□□□ -0.24
PPFIA2-211ENST00000548586 SALL3Q9BXA9 1300 aa13.52□□□□□ -0.24
PPFIA2-211ENST00000548586 PPLO60437 1756 aa13.52□□□□□ -0.25
PPFIA2-211ENST00000548586 NCBP1Q09161 790 aaKnown RBP13.52□□□□□ -0.25
PPFIA2-211ENST00000548586 Q6ZUG5 572 aa13.52□□□□□ -0.25
PPFIA2-211ENST00000548586 AOPEPQ8N6M6 819 aa13.52□□□□□ -0.25
PPFIA2-211ENST00000548586 RBM33Q96EV2 1170 aaKnown RBP13.52□□□□□ -0.25
PPFIA2-211ENST00000548586 DBF4Q9UBU7 674 aaPredicted RBP13.52□□□□□ -0.25
PPFIA2-211ENST00000548586 ZNF215Q9UL58 517 aaPredicted RBP13.52□□□□□ -0.25
PPFIA2-211ENST00000548586 ARHGEF28Q8N1W1 1705 aaKnown RBP13.51□□□□□ -0.25
PPFIA2-211ENST00000548586 A0A0D9SFI3 127 aa13.51□□□□□ -0.25
PPFIA2-211ENST00000548586 GTF2F1P35269 517 aaKnown RBP eCLIP13.51□□□□□ -0.25
PPFIA2-211ENST00000548586 STX1AQ16623 288 aa13.51□□□□□ -0.25
PPFIA2-211ENST00000548586 KRT222Q8N1A0 295 aa13.51□□□□□ -0.25
PPFIA2-211ENST00000548586 ANO10Q9NW15 660 aa13.51□□□□□ -0.25
PPFIA2-211ENST00000548586 ZNF330Q9Y3S2 320 aaPredicted RBP13.51□□□□□ -0.25
PPFIA2-211ENST00000548586 CCDC66A2RUB6 948 aa13.51□□□□□ -0.25
PPFIA2-211ENST00000548586 CPLX1O14810 134 aa13.51□□□□□ -0.25
PPFIA2-211ENST00000548586 ELF2Q15723 593 aa13.51□□□□□ -0.25
PPFIA2-211ENST00000548586 CCDC129Q6ZRS4 1044 aa13.51□□□□□ -0.25
PPFIA2-211ENST00000548586 AMOTL2Q9Y2J4 779 aa13.51□□□□□ -0.25
PPFIA2-211ENST00000548586 EPB41L2O43491 1005 aaKnown RBP13.5□□□□□ -0.25
PPFIA2-211ENST00000548586 DDX46Q7L014 1031 aaKnown RBP13.5□□□□□ -0.25
PPFIA2-211ENST00000548586 TMC6Q7Z403 805 aa13.5□□□□□ -0.25
PPFIA2-211ENST00000548586 ZNF396Q96N95 335 aaPredicted RBP13.5□□□□□ -0.25
PPFIA2-211ENST00000548586 RPS6KB1P23443 525 aa13.5□□□□□ -0.25
PPFIA2-211ENST00000548586 KRT32Q14532 448 aa13.5□□□□□ -0.25
PPFIA2-211ENST00000548586 CHST3Q7LGC8 479 aa13.5□□□□□ -0.25
PPFIA2-211ENST00000548586 RAB11FIP4Q86YS3 637 aa13.5□□□□□ -0.25
PPFIA2-211ENST00000548586 TM6SF1Q9BZW5 370 aa13.5□□□□□ -0.25
PPFIA2-211ENST00000548586 PDIA4P13667 645 aaKnown RBP13.5□□□□□ -0.25
PPFIA2-211ENST00000548586 SYNE3Q6ZMZ3 975 aa13.5□□□□□ -0.25
PPFIA2-211ENST00000548586 FTOQ9C0B1 505 aaKnown RBP eCLIP13.5□□□□□ -0.25
PPFIA2-211ENST00000548586 SFPQP23246 707 aaKnown RBP eCLIP13.49□□□□□ -0.25
PPFIA2-211ENST00000548586 ZBTB9Q96C00 473 aa13.49□□□□□ -0.25
PPFIA2-211ENST00000548586 EAF2Q96CJ1 260 aaPredicted RBP13.49□□□□□ -0.25
PPFIA2-211ENST00000548586 MAP3K5Q99683 1374 aa13.49□□□□□ -0.25
PPFIA2-211ENST00000548586 POLR3DP05423 398 aaPredicted RBP13.49□□□□□ -0.25
PPFIA2-211ENST00000548586 SNW1Q13573 536 aaKnown RBP13.49□□□□□ -0.25
PPFIA2-211ENST00000548586 BEND3Q5T5X7 828 aa13.49□□□□□ -0.25
PPFIA2-211ENST00000548586 CRB1P82279 1406 aa13.49□□□□□ -0.25
PPFIA2-211ENST00000548586 CPS1P31327 1500 aa13.49□□□□□ -0.25
PPFIA2-211ENST00000548586 POLR3GO15318 223 aaPredicted RBP13.49□□□□□ -0.25
PPFIA2-211ENST00000548586 TMX1Q9H3N1 280 aa13.49□□□□□ -0.25
PPFIA2-211ENST00000548586 TLR7Q9NYK1 1049 aaKnown RBP13.49□□□□□ -0.25
PPFIA2-211ENST00000548586 ALKQ9UM73 1620 aa13.49□□□□□ -0.25
PPFIA2-211ENST00000548586 CCDC144BQ3MJ40 725 aa13.48□□□□□ -0.25
PPFIA2-211ENST00000548586 CCDC144CPQ8IYA2 1237 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms