RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 AIMP1Q12904 312 aaKnown RBP11.21□□□□□ -0.61
SP1-203ENST00000548560 PROSER3Q2NL68 480 aa11.21□□□□□ -0.61
SP1-203ENST00000548560 TWISTNBQ3B726 338 aaPredicted RBP11.21□□□□□ -0.61
SP1-203ENST00000548560 CCDC30Q5VVM6 783 aa11.21□□□□□ -0.61
SP1-203ENST00000548560 TTLL7Q6ZT98 887 aa11.21□□□□□ -0.61
SP1-203ENST00000548560 PELP1Q8IZL8 1130 aaKnown RBP11.21□□□□□ -0.61
SP1-203ENST00000548560 C8orf58Q8NAV2 365 aa11.21□□□□□ -0.61
SP1-203ENST00000548560 ZNF784Q8NCA9 323 aaPredicted RBP11.21□□□□□ -0.61
SP1-203ENST00000548560 NLGN2Q8NFZ4 835 aa11.21□□□□□ -0.61
SP1-203ENST00000548560 STK31Q9BXU1 1019 aa11.21□□□□□ -0.61
SP1-203ENST00000548560 ZBTB3Q9H5J0 574 aa11.21□□□□□ -0.61
SP1-203ENST00000548560 HYPKQ9NX55 129 aa11.21□□□□□ -0.61
SP1-203ENST00000548560 NIP7Q9Y221 180 aaKnown RBP eCLIP11.21□□□□□ -0.61
SP1-203ENST00000548560 ARFGEF1Q9Y6D6 1849 aa11.21□□□□□ -0.62
SP1-203ENST00000548560 ATP10DQ9P241 1426 aa11.2□□□□□ -0.62
SP1-203ENST00000548560 TGFB2P61812 414 aa11.2□□□□□ -0.62
SP1-203ENST00000548560 ST5P78524 1137 aa11.2□□□□□ -0.62
SP1-203ENST00000548560 PDIA6Q15084 440 aa11.2□□□□□ -0.62
SP1-203ENST00000548560 GPR162Q16538 588 aa11.2□□□□□ -0.62
SP1-203ENST00000548560 CNBD1Q8NA66 436 aa11.2□□□□□ -0.62
SP1-203ENST00000548560 XAGE3Q8WTP9 111 aa11.2□□□□□ -0.62
SP1-203ENST00000548560 PXDNLA1KZ92 1463 aa11.19□□□□□ -0.62
SP1-203ENST00000548560 ZNF521Q96K83 1311 aa11.19□□□□□ -0.62
SP1-203ENST00000548560 COL11A2P13942 1736 aaPredicted RBP11.19□□□□□ -0.62
SP1-203ENST00000548560 E9PSI1 815 aa11.19□□□□□ -0.62
SP1-203ENST00000548560 HLFQ16534 295 aa11.19□□□□□ -0.62
SP1-203ENST00000548560 HSP90AB3PQ58FF7 597 aa11.19□□□□□ -0.62
SP1-203ENST00000548560 COPS6Q7L5N1 327 aa11.19□□□□□ -0.62
SP1-203ENST00000548560 NBPF5PQ86XG9 351 aaPredicted RBP11.19□□□□□ -0.62
SP1-203ENST00000548560 TSPYL6Q8N831 410 aa11.19□□□□□ -0.62
SP1-203ENST00000548560 GTF2E1P29083 439 aaPredicted RBP11.18□□□□□ -0.62
SP1-203ENST00000548560 EXOSC9Q06265 439 aaKnown RBP11.18□□□□□ -0.62
SP1-203ENST00000548560 GIGYF2Q6Y7W6 1299 aaKnown RBP11.18□□□□□ -0.62
SP1-203ENST00000548560 LRP10Q7Z4F1 713 aa11.18□□□□□ -0.62
SP1-203ENST00000548560 NYXQ9GZU5 481 aa11.18□□□□□ -0.62
SP1-203ENST00000548560 FAM177BA6PVY3 158 aa11.17□□□□□ -0.62
SP1-203ENST00000548560 DDX58O95786 925 aaKnown RBP11.17□□□□□ -0.62
SP1-203ENST00000548560 GPTP24298 496 aa11.17□□□□□ -0.62
SP1-203ENST00000548560 PRR5LQ6MZQ0 368 aa11.17□□□□□ -0.62
SP1-203ENST00000548560 TPTE2Q6XPS3 522 aa11.17□□□□□ -0.62
SP1-203ENST00000548560 IBTKQ9P2D0 1353 aaPredicted RBP11.16□□□□□ -0.62
SP1-203ENST00000548560 LAMB2P55268 1798 aa11.16□□□□□ -0.62
SP1-203ENST00000548560 PDE6BP35913 854 aa11.16□□□□□ -0.62
SP1-203ENST00000548560 HNRNPUQ00839 825 aaKnown RBP eCLIP11.16□□□□□ -0.62
SP1-203ENST00000548560 PARP10Q53GL7 1025 aa11.16□□□□□ -0.62
SP1-203ENST00000548560 ANKRD13DQ6ZTN6 518 aa11.16□□□□□ -0.62
SP1-203ENST00000548560 PPP1R42Q7Z4L9 355 aa11.16□□□□□ -0.62
SP1-203ENST00000548560 RIC3Q7Z5B4 369 aa11.16□□□□□ -0.62
SP1-203ENST00000548560 PLBD2Q8NHP8 589 aa11.16□□□□□ -0.62
SP1-203ENST00000548560 PDZRN3Q9UPQ7 1066 aa11.16□□□□□ -0.62
SP1-203ENST00000548560 TNRC6CQ9HCJ0 1690 aaKnown RBP11.16□□□□□ -0.62
SP1-203ENST00000548560 A0A0G2JLW4 131 aa11.15□□□□□ -0.62
SP1-203ENST00000548560 H0YIN7 160 aa11.15□□□□□ -0.62
SP1-203ENST00000548560 DPEP1P16444 411 aa11.15□□□□□ -0.62
SP1-203ENST00000548560 SP7Q8TDD2 431 aaPredicted RBP11.15□□□□□ -0.62
SP1-203ENST00000548560 BRIP1Q9BX63 1249 aa11.15□□□□□ -0.62
SP1-203ENST00000548560 WWC3Q9ULE0 1092 aa11.15□□□□□ -0.62
SP1-203ENST00000548560 MYH3P11055 1940 aa11.15□□□□□ -0.62
SP1-203ENST00000548560 UBN2Q6ZU65 1347 aa11.14□□□□□ -0.63
SP1-203ENST00000548560 TCERG1O14776 1098 aaKnown RBP11.14□□□□□ -0.63
SP1-203ENST00000548560 GRIN3BO60391 1043 aa11.14□□□□□ -0.63
SP1-203ENST00000548560 VAMP4O75379 141 aa11.14□□□□□ -0.63
SP1-203ENST00000548560 SLFN5Q08AF3 891 aa11.14□□□□□ -0.63
SP1-203ENST00000548560 TCIRG1Q13488 830 aa11.14□□□□□ -0.63
SP1-203ENST00000548560 ZNF467Q7Z7K2 595 aaPredicted RBP11.14□□□□□ -0.63
SP1-203ENST00000548560 C2CD5Q86YS7 1000 aa11.14□□□□□ -0.63
SP1-203ENST00000548560 ZNF34Q8IZ26 560 aa11.14□□□□□ -0.63
SP1-203ENST00000548560 CCDC24Q8N4L8 307 aa11.14□□□□□ -0.63
SP1-203ENST00000548560 PHAXQ9H814 394 aaKnown RBP11.14□□□□□ -0.63
SP1-203ENST00000548560 PIM2Q9P1W9 311 aa11.14□□□□□ -0.63
SP1-203ENST00000548560 BCS1LQ9Y276 419 aa11.14□□□□□ -0.63
SP1-203ENST00000548560 RNF123Q5XPI4 1314 aa11.13□□□□□ -0.63
SP1-203ENST00000548560 DDX60Q8IY21 1712 aaKnown RBP11.13□□□□□ -0.63
SP1-203ENST00000548560 RIC1Q4ADV7 1423 aa11.13□□□□□ -0.63
SP1-203ENST00000548560 YBX3P16989 372 aaKnown RBP eCLIP11.13□□□□□ -0.631e-6■□□□□ 8.8
SP1-203ENST00000548560 CHRNA5P30532 468 aa11.13□□□□□ -0.63
SP1-203ENST00000548560 UTP14AQ9BVJ6 771 aaKnown RBP11.13□□□□□ -0.63
SP1-203ENST00000548560 CCDC88AQ3V6T2 1871 aa11.12□□□□□ -0.63
SP1-203ENST00000548560 NEXNQ0ZGT2 675 aa11.12□□□□□ -0.63
SP1-203ENST00000548560 FKBP5Q13451 457 aaPredicted RBP11.12□□□□□ -0.63
SP1-203ENST00000548560 DALRD3Q5D0E6 543 aaKnown RBP11.12□□□□□ -0.63
SP1-203ENST00000548560 SUSD4Q5VX71 490 aa11.12□□□□□ -0.63
SP1-203ENST00000548560 NUTM1Q86Y26 1132 aa11.12□□□□□ -0.63
SP1-203ENST00000548560 ZNF622Q969S3 477 aaKnown RBP eCLIP11.12□□□□□ -0.631e-7■■■□□ 16.2
SP1-203ENST00000548560 CDCA7LQ96GN5 454 aa11.12□□□□□ -0.63
SP1-203ENST00000548560 TSPYL2Q9H2G4 693 aaPredicted RBP11.12□□□□□ -0.63
SP1-203ENST00000548560 ABCC12Q96J65 1359 aa11.12□□□□□ -0.63
SP1-203ENST00000548560 SLX4Q8IY92 1834 aa11.12□□□□□ -0.63
SP1-203ENST00000548560 HAX1O00165 279 aa11.11□□□□□ -0.63
SP1-203ENST00000548560 NTSR2O95665 410 aa11.11□□□□□ -0.63
SP1-203ENST00000548560 FLIIQ13045 1269 aa11.11□□□□□ -0.63
SP1-203ENST00000548560 ERFEQ4G0M1 354 aa11.11□□□□□ -0.63
SP1-203ENST00000548560 KSR2Q6VAB6 950 aa11.11□□□□□ -0.63
SP1-203ENST00000548560 NLRP10Q86W26 655 aa11.11□□□□□ -0.63
SP1-203ENST00000548560 ZNF428Q96B54 188 aa11.11□□□□□ -0.63
SP1-203ENST00000548560 MYD88Q99836 296 aa11.11□□□□□ -0.63
SP1-203ENST00000548560 TRMT112Q9UI30 125 aaKnown RBP11.11□□□□□ -0.63
SP1-203ENST00000548560 MAP3K2Q9Y2U5 619 aa11.11□□□□□ -0.63
SP1-203ENST00000548560 SH3TC1Q8TE82 1336 aa11.1□□□□□ -0.63
SP1-203ENST00000548560 SBF1O95248 1867 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms