RNA–Protein interactions for RNA: ENST00000548363.1

TUBA1A-205, Transcript of tubulin alpha 1a, human

TSL 2

Gene TUBA1A, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1A-205	ENST00000548363	SCN7A	Q01118	1682 aa		11.23	□□□□□ -0.61
TUBA1A-205	ENST00000548363	TIAM2	Q8IVF5	1701 aa		11.23	□□□□□ -0.61
TUBA1A-205	ENST00000548363	LAMB4	A4D0S4	1761 aa		11.23	□□□□□ -0.61
TUBA1A-205	ENST00000548363	HTATSF1	O43719	755 aa	Known RBP	11.22	□□□□□ -0.61
TUBA1A-205	ENST00000548363	ZPR1	O75312	459 aa		11.22	□□□□□ -0.61
TUBA1A-205	ENST00000548363	CANX	P27824	592 aa	Known RBP	11.22	□□□□□ -0.61
TUBA1A-205	ENST00000548363	MNX1	P50219	401 aa	Predicted RBP	11.22	□□□□□ -0.61
TUBA1A-205	ENST00000548363	FKBP8	Q14318	412 aa		11.22	□□□□□ -0.61
TUBA1A-205	ENST00000548363	CNTROB	Q8N137	903 aa		11.22	□□□□□ -0.61
TUBA1A-205	ENST00000548363	PLEKHF1	Q96S99	279 aa		11.22	□□□□□ -0.61
TUBA1A-205	ENST00000548363	BCOR	Q6W2J9	1755 aa		11.21	□□□□□ -0.61
TUBA1A-205	ENST00000548363	AOC2	O75106	756 aa		11.21	□□□□□ -0.61
TUBA1A-205	ENST00000548363	NFE2L2	Q16236	605 aa		11.21	□□□□□ -0.61
TUBA1A-205	ENST00000548363	ERFE	Q4G0M1	354 aa		11.21	□□□□□ -0.61
TUBA1A-205	ENST00000548363	USPL1	Q5W0Q7	1092 aa		11.21	□□□□□ -0.61
TUBA1A-205	ENST00000548363	ASTL	Q6HA08	431 aa	Predicted RBP	11.21	□□□□□ -0.61
TUBA1A-205	ENST00000548363	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.21	□□□□□ -0.61
TUBA1A-205	ENST00000548363	PNN	Q9H307	717 aa	Known RBP	11.21	□□□□□ -0.61
TUBA1A-205	ENST00000548363	CCER2	I3L3R5	266 aa		11.2	□□□□□ -0.62
TUBA1A-205	ENST00000548363	NFKBIE	O00221	500 aa		11.2	□□□□□ -0.62
TUBA1A-205	ENST00000548363	ATMIN	O43313	823 aa	Predicted RBP	11.2	□□□□□ -0.62
TUBA1A-205	ENST00000548363	EAPP	Q56P03	285 aa	Predicted RBP	11.2	□□□□□ -0.62
TUBA1A-205	ENST00000548363	MS4A3	Q96HJ5	214 aa		11.2	□□□□□ -0.62
TUBA1A-205	ENST00000548363	YTHDC1	Q96MU7	727 aa	Known RBP	11.2	□□□□□ -0.62
TUBA1A-205	ENST00000548363	NARF	Q9UHQ1	456 aa		11.2	□□□□□ -0.62
TUBA1A-205	ENST00000548363	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.2	□□□□□ -0.62
TUBA1A-205	ENST00000548363	NRXN2	Q9P2S2	1712 aa		11.2	□□□□□ -0.62
TUBA1A-205	ENST00000548363	ANP32C	O43423	234 aa		11.19	□□□□□ -0.62
TUBA1A-205	ENST00000548363	EIF5	P55010	431 aa	Known RBP	11.19	□□□□□ -0.62
TUBA1A-205	ENST00000548363	BRPF1	P55201	1214 aa	Predicted RBP	11.19	□□□□□ -0.62
TUBA1A-205	ENST00000548363	DDR1	Q08345	913 aa		11.19	□□□□□ -0.62
TUBA1A-205	ENST00000548363	TAF7	Q15545	349 aa	Predicted RBP	11.19	□□□□□ -0.62
TUBA1A-205	ENST00000548363	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.19	□□□□□ -0.62
TUBA1A-205	ENST00000548363	MIS18A	Q9NYP9	233 aa		11.19	□□□□□ -0.62
TUBA1A-205	ENST00000548363	PRAMEF22	A3QJZ6	481 aa		11.18	□□□□□ -0.62
TUBA1A-205	ENST00000548363	A1BG	P04217	495 aa		11.18	□□□□□ -0.62
TUBA1A-205	ENST00000548363	MAP1S	Q66K74	1059 aa	Predicted RBP	11.18	□□□□□ -0.62
TUBA1A-205	ENST00000548363	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.18	□□□□□ -0.62
TUBA1A-205	ENST00000548363	THUMPD2	Q9BTF0	503 aa	Known RBP	11.18	□□□□□ -0.62
TUBA1A-205	ENST00000548363	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
TUBA1A-205	ENST00000548363		A0A087WZG4	1122 aa		11.17	□□□□□ -0.62
TUBA1A-205	ENST00000548363	POLRMT	O00411	1230 aa	Known RBP	11.17	□□□□□ -0.62
TUBA1A-205	ENST00000548363	SNRPA1	P09661	255 aa	Known RBP	11.17	□□□□□ -0.62
TUBA1A-205	ENST00000548363	TM4SF1	P30408	202 aa		11.17	□□□□□ -0.62
TUBA1A-205	ENST00000548363	IL6ST	P40189	918 aa	Predicted RBP	11.17	□□□□□ -0.62
TUBA1A-205	ENST00000548363	PIP4K2A	P48426	406 aa	Predicted RBP	11.17	□□□□□ -0.62
TUBA1A-205	ENST00000548363	WDR43	Q15061	677 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
TUBA1A-205	ENST00000548363	LCE2D	Q5TA82	110 aa	Predicted RBP	11.17	□□□□□ -0.62
TUBA1A-205	ENST00000548363	NPM2	Q86SE8	214 aa	Known RBP	11.17	□□□□□ -0.62
TUBA1A-205	ENST00000548363	CCDC146	Q8IYE0	955 aa		11.17	□□□□□ -0.62
TUBA1A-205	ENST00000548363	BCL2L12	Q9HB09	334 aa		11.17	□□□□□ -0.62
TUBA1A-205	ENST00000548363	USP16	Q9Y5T5	823 aa		11.17	□□□□□ -0.62
TUBA1A-205	ENST00000548363	DLEC1	Q9Y238	1755 aa		11.17	□□□□□ -0.62
TUBA1A-205	ENST00000548363	SCN4A	P35499	1836 aa		11.16	□□□□□ -0.62
TUBA1A-205	ENST00000548363	DICER1	Q9UPY3	1922 aa	Known RBP	11.16	□□□□□ -0.62
TUBA1A-205	ENST00000548363	RIPK4	P57078	832 aa		11.16	□□□□□ -0.62
TUBA1A-205	ENST00000548363	NFIX	Q14938	502 aa		11.16	□□□□□ -0.62
TUBA1A-205	ENST00000548363	TBC1D2B	Q9UPU7	963 aa		11.16	□□□□□ -0.62
TUBA1A-205	ENST00000548363	COLQ	Q9Y215	455 aa	Predicted RBP	11.16	□□□□□ -0.62
TUBA1A-205	ENST00000548363	ANKRD31	Q8N7Z5	1873 aa		11.16	□□□□□ -0.62
TUBA1A-205	ENST00000548363	TRIOBP	Q9H2D6	2365 aa		11.16	□□□□□ -0.62
TUBA1A-205	ENST00000548363	CACNA1S	Q13698	1873 aa		11.15	□□□□□ -0.62
TUBA1A-205	ENST00000548363	TMPO	P42166	694 aa	Known RBP	11.15	□□□□□ -0.62
TUBA1A-205	ENST00000548363	BICDL1	Q6ZP65	573 aa		11.15	□□□□□ -0.62
TUBA1A-205	ENST00000548363	PNMA8A	Q86V59	439 aa	Predicted RBP	11.15	□□□□□ -0.62
TUBA1A-205	ENST00000548363	MPND	Q8N594	471 aa		11.15	□□□□□ -0.62
TUBA1A-205	ENST00000548363	TTLL6	Q8N841	843 aa		11.15	□□□□□ -0.62
TUBA1A-205	ENST00000548363	PNISR	Q8TF01	805 aa	Known RBP	11.15	□□□□□ -0.62
TUBA1A-205	ENST00000548363	HPS5	Q9UPZ3	1129 aa		11.15	□□□□□ -0.62
TUBA1A-205	ENST00000548363	TLL2	Q9Y6L7	1015 aa		11.15	□□□□□ -0.62
TUBA1A-205	ENST00000548363	SZT2	Q5T011	3432 aa		11.14	□□□□□ -0.63
TUBA1A-205	ENST00000548363	SERPINB2	P05120	415 aa		11.14	□□□□□ -0.63
TUBA1A-205	ENST00000548363	NEUROD2	Q15784	382 aa		11.14	□□□□□ -0.63
TUBA1A-205	ENST00000548363	TBC1D9B	Q66K14	1250 aa		11.14	□□□□□ -0.63
TUBA1A-205	ENST00000548363	CIAPIN1	Q6FI81	312 aa		11.14	□□□□□ -0.63
TUBA1A-205	ENST00000548363	DZIP3	Q86Y13	1208 aa	Known RBP	11.14	□□□□□ -0.63
TUBA1A-205	ENST00000548363	RRP7A	Q9Y3A4	280 aa	Known RBP	11.14	□□□□□ -0.63
TUBA1A-205	ENST00000548363	NUP98	P52948	1817 aa		11.14	□□□□□ -0.63
TUBA1A-205	ENST00000548363	COL11A2	P13942	1736 aa	Predicted RBP	11.13	□□□□□ -0.63
TUBA1A-205	ENST00000548363	CAMTA2	O94983	1202 aa		11.13	□□□□□ -0.63
TUBA1A-205	ENST00000548363	EPHX2	P34913	555 aa		11.13	□□□□□ -0.63
TUBA1A-205	ENST00000548363	EIF4A1	P60842	406 aa	Known RBP	11.13	□□□□□ -0.63
TUBA1A-205	ENST00000548363	LMOD3	Q0VAK6	560 aa		11.13	□□□□□ -0.63
TUBA1A-205	ENST00000548363	CTU1	Q7Z7A3	348 aa	Known RBP	11.13	□□□□□ -0.63
TUBA1A-205	ENST00000548363	RUNDC1	Q96C34	613 aa		11.13	□□□□□ -0.63
TUBA1A-205	ENST00000548363	TSPYL4	Q9UJ04	414 aa		11.13	□□□□□ -0.63
TUBA1A-205	ENST00000548363	HACL1	Q9UJ83	578 aa		11.13	□□□□□ -0.63
TUBA1A-205	ENST00000548363	ADAMTS8	Q9UP79	889 aa		11.13	□□□□□ -0.63
TUBA1A-205	ENST00000548363	CARMIL3	Q8ND23	1372 aa		11.13	□□□□□ -0.63
TUBA1A-205	ENST00000548363	NBPF26	B4DH59	902 aa		11.12	□□□□□ -0.63
TUBA1A-205	ENST00000548363	CST9	Q5W186	159 aa		11.12	□□□□□ -0.63
TUBA1A-205	ENST00000548363	NBPF10	Q6P3W6	841 aa	Known RBP	11.12	□□□□□ -0.63
TUBA1A-205	ENST00000548363	FMR1	Q06787	632 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
TUBA1A-205	ENST00000548363	ADAMTSL1	Q8N6G6	1762 aa		11.11	□□□□□ -0.63
TUBA1A-205	ENST00000548363	SETDB2	Q96T68	719 aa		11.1	□□□□□ -0.63
TUBA1A-205	ENST00000548363	ZNF652	Q9Y2D9	606 aa		11.1	□□□□□ -0.63
TUBA1A-205	ENST00000548363	COL6A3	P12111	3177 aa		11.09	□□□□□ -0.63
TUBA1A-205	ENST00000548363	NPHP1	O15259	732 aa		11.09	□□□□□ -0.63
TUBA1A-205	ENST00000548363	PKN2	Q16513	984 aa	Known RBP	11.09	□□□□□ -0.63
TUBA1A-205	ENST00000548363	PRR5L	Q6MZQ0	368 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms