RNA–Protein interactions for RNA: ENST00000548350.1

ASIC1-204, Transcript of acid sensing ion channel subunit 1, human

TSL 4

Gene ASIC1, Length 560 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ASIC1-204	ENST00000548350	VEGFA	P15692	232 aa	Predicted RBP	13.67	□□□□□ -0.22
ASIC1-204	ENST00000548350	DIEXF	Q68CQ4	756 aa	Known RBP	13.67	□□□□□ -0.22
ASIC1-204	ENST00000548350	STYK1	Q6J9G0	422 aa		13.67	□□□□□ -0.22
ASIC1-204	ENST00000548350	RIC3	Q7Z5B4	369 aa		13.67	□□□□□ -0.22
ASIC1-204	ENST00000548350	C8orf58	Q8NAV2	365 aa		13.67	□□□□□ -0.22
ASIC1-204	ENST00000548350	PLBD2	Q8NHP8	589 aa		13.67	□□□□□ -0.22
ASIC1-204	ENST00000548350	GLTPD2	A6NH11	291 aa		13.66	□□□□□ -0.22
ASIC1-204	ENST00000548350	HSPA1A	P0DMV8	641 aa	Known RBP	13.66	□□□□□ -0.22
ASIC1-204	ENST00000548350	HSPA1B	P0DMV9	641 aa	Known RBP	13.66	□□□□□ -0.22
ASIC1-204	ENST00000548350	NPR1	P16066	1061 aa		13.66	□□□□□ -0.22
ASIC1-204	ENST00000548350	ALDH1B1	P30837	517 aa		13.66	□□□□□ -0.22
ASIC1-204	ENST00000548350	TCIRG1	Q13488	830 aa		13.66	□□□□□ -0.22
ASIC1-204	ENST00000548350	TWISTNB	Q3B726	338 aa	Predicted RBP	13.66	□□□□□ -0.22
ASIC1-204	ENST00000548350	SOGA3	Q5TF21	947 aa		13.66	□□□□□ -0.22
ASIC1-204	ENST00000548350	ZNF34	Q8IZ26	560 aa		13.66	□□□□□ -0.22
ASIC1-204	ENST00000548350	TMX4	Q9H1E5	349 aa	Predicted RBP	13.66	□□□□□ -0.22
ASIC1-204	ENST00000548350	NRXN2	Q9P2S2	1712 aa		13.66	□□□□□ -0.22
ASIC1-204	ENST00000548350	SBF1	O95248	1867 aa		13.65	□□□□□ -0.22
ASIC1-204	ENST00000548350	SRGN	P10124	158 aa		13.65	□□□□□ -0.22
ASIC1-204	ENST00000548350	SUSD4	Q5VX71	490 aa		13.65	□□□□□ -0.22
ASIC1-204	ENST00000548350	NUTM1	Q86Y26	1132 aa		13.65	□□□□□ -0.22
ASIC1-204	ENST00000548350	RPGR	Q92834	1020 aa	Known RBP	13.65	□□□□□ -0.22
ASIC1-204	ENST00000548350	NLRP3	Q96P20	1036 aa		13.65	□□□□□ -0.22
ASIC1-204	ENST00000548350	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.65	□□□□□ -0.22
ASIC1-204	ENST00000548350	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.64	□□□□□ -0.23
ASIC1-204	ENST00000548350	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.64	□□□□□ -0.23
ASIC1-204	ENST00000548350	HSP90B1	P14625	803 aa	Known RBP	13.64	□□□□□ -0.23
ASIC1-204	ENST00000548350	ERFE	Q4G0M1	354 aa		13.64	□□□□□ -0.23
ASIC1-204	ENST00000548350	LRP10	Q7Z4F1	713 aa		13.64	□□□□□ -0.23
ASIC1-204	ENST00000548350	TRMT112	Q9UI30	125 aa	Known RBP	13.64	□□□□□ -0.23
ASIC1-204	ENST00000548350	RNF123	Q5XPI4	1314 aa		13.64	□□□□□ -0.23
ASIC1-204	ENST00000548350	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.63	□□□□□ -0.23
ASIC1-204	ENST00000548350	NFKBIE	O00221	500 aa		13.63	□□□□□ -0.23
ASIC1-204	ENST00000548350	C21orf2	O43822	256 aa		13.63	□□□□□ -0.23
ASIC1-204	ENST00000548350	RBM17	Q96I25	401 aa	Known RBP	13.63	□□□□□ -0.23
ASIC1-204	ENST00000548350	SLC4A2	P04920	1241 aa		13.62	□□□□□ -0.23
ASIC1-204	ENST00000548350	NEXN	Q0ZGT2	675 aa		13.62	□□□□□ -0.23
ASIC1-204	ENST00000548350	PRPF40B	Q6NWY9	871 aa	Known RBP	13.62	□□□□□ -0.23
ASIC1-204	ENST00000548350	NLRP10	Q86W26	655 aa		13.62	□□□□□ -0.23
ASIC1-204	ENST00000548350	TSPYL6	Q8N831	410 aa		13.62	□□□□□ -0.23
ASIC1-204	ENST00000548350	UBN2	Q6ZU65	1347 aa		13.62	□□□□□ -0.23
ASIC1-204	ENST00000548350	SH3TC1	Q8TE82	1336 aa		13.62	□□□□□ -0.23
ASIC1-204	ENST00000548350	FANCI	Q9NVI1	1328 aa		13.62	□□□□□ -0.23
ASIC1-204	ENST00000548350	KLRG2	A4D1S0	409 aa	Predicted RBP	13.61	□□□□□ -0.23
ASIC1-204	ENST00000548350	POTEC	B2RU33	542 aa		13.61	□□□□□ -0.23
ASIC1-204	ENST00000548350	NTSR2	O95665	410 aa		13.61	□□□□□ -0.23
ASIC1-204	ENST00000548350	PHAX	Q9H814	394 aa	Known RBP	13.61	□□□□□ -0.23
ASIC1-204	ENST00000548350	ATP5J2-PTCD1	G3V325	749 aa		13.6	□□□□□ -0.23
ASIC1-204	ENST00000548350	EXOSC9	Q06265	439 aa	Known RBP	13.6	□□□□□ -0.23
ASIC1-204	ENST00000548350	SLC10A5	Q5PT55	438 aa		13.6	□□□□□ -0.23
ASIC1-204	ENST00000548350	DPY19L2	Q6NUT2	758 aa		13.6	□□□□□ -0.23
ASIC1-204	ENST00000548350	RTKN2	Q8IZC4	609 aa		13.6	□□□□□ -0.23
ASIC1-204	ENST00000548350	ANKRD31	Q8N7Z5	1873 aa		13.6	□□□□□ -0.23
ASIC1-204	ENST00000548350		E9PSI1	815 aa		13.59	□□□□□ -0.23
ASIC1-204	ENST00000548350	TCERG1	O14776	1098 aa	Known RBP	13.59	□□□□□ -0.23
ASIC1-204	ENST00000548350	TRIM28	Q13263	835 aa	Known RBP	13.59	□□□□□ -0.23
ASIC1-204	ENST00000548350	GRIPAP1	Q4V328	841 aa		13.59	□□□□□ -0.23
ASIC1-204	ENST00000548350	CCDC93	Q567U6	631 aa		13.59	□□□□□ -0.23
ASIC1-204	ENST00000548350	CC2D2B	Q6DHV5	1058 aa		13.59	□□□□□ -0.23
ASIC1-204	ENST00000548350	KSR2	Q6VAB6	950 aa		13.59	□□□□□ -0.23
ASIC1-204	ENST00000548350	MYD88	Q99836	296 aa		13.59	□□□□□ -0.23
ASIC1-204	ENST00000548350	TAOK3	Q9H2K8	898 aa		13.59	□□□□□ -0.23
ASIC1-204	ENST00000548350	MKRN1	Q9UHC7	482 aa	Known RBP	13.59	□□□□□ -0.23
ASIC1-204	ENST00000548350	DLEC1	Q9Y238	1755 aa		13.58	□□□□□ -0.23
ASIC1-204	ENST00000548350	CRY2	Q49AN0	593 aa		13.58	□□□□□ -0.24
ASIC1-204	ENST00000548350	DDX46	Q7L014	1031 aa	Known RBP	13.58	□□□□□ -0.24
ASIC1-204	ENST00000548350	CCDC191	Q8NCU4	936 aa		13.58	□□□□□ -0.24
ASIC1-204	ENST00000548350	CRAMP1	Q96RY5	1269 aa		13.58	□□□□□ -0.24
ASIC1-204	ENST00000548350	ISCA1	Q9BUE6	129 aa		13.58	□□□□□ -0.24
ASIC1-204	ENST00000548350	CWC25	Q9NXE8	425 aa	Predicted RBP	13.58	□□□□□ -0.24
ASIC1-204	ENST00000548350	MAP3K2	Q9Y2U5	619 aa		13.58	□□□□□ -0.24
ASIC1-204	ENST00000548350	CACNA1F	O60840	1977 aa		13.58	□□□□□ -0.24
ASIC1-204	ENST00000548350	PI4KAP2	A4QPH2	592 aa		13.57	□□□□□ -0.24
ASIC1-204	ENST00000548350	VAMP4	O75379	141 aa		13.57	□□□□□ -0.24
ASIC1-204	ENST00000548350	HCLS1	P14317	486 aa	Predicted RBP	13.57	□□□□□ -0.24
ASIC1-204	ENST00000548350	HOXA10	P31260	410 aa	Predicted RBP	13.57	□□□□□ -0.24
ASIC1-204	ENST00000548350	FKBP5	Q13451	457 aa	Predicted RBP	13.57	□□□□□ -0.24
ASIC1-204	ENST00000548350	PI4KAP1	Q8N8J0	262 aa		13.57	□□□□□ -0.24
ASIC1-204	ENST00000548350	FAM89A	Q96GI7	184 aa		13.57	□□□□□ -0.24
ASIC1-204	ENST00000548350	METTL22	Q9BUU2	404 aa	Predicted RBP	13.57	□□□□□ -0.24
ASIC1-204	ENST00000548350	ABCC12	Q96J65	1359 aa		13.57	□□□□□ -0.24
ASIC1-204	ENST00000548350	BBOX1	O75936	387 aa		13.56	□□□□□ -0.24
ASIC1-204	ENST00000548350	POTEI	P0CG38	1075 aa		13.56	□□□□□ -0.24
ASIC1-204	ENST00000548350	POTEJ	P0CG39	1038 aa		13.56	□□□□□ -0.24
ASIC1-204	ENST00000548350	RTL5	Q5HYW3	569 aa	Predicted RBP	13.56	□□□□□ -0.24
ASIC1-204	ENST00000548350	CHADL	Q6NUI6	762 aa		13.56	□□□□□ -0.24
ASIC1-204	ENST00000548350	MIER1	Q8N108	512 aa		13.56	□□□□□ -0.24
ASIC1-204	ENST00000548350	CCDC88A	Q3V6T2	1871 aa		13.56	□□□□□ -0.24
ASIC1-204	ENST00000548350	TIAM2	Q8IVF5	1701 aa		13.56	□□□□□ -0.24
ASIC1-204	ENST00000548350	RIC1	Q4ADV7	1423 aa		13.56	□□□□□ -0.24
ASIC1-204	ENST00000548350	ANKRD36C	Q5JPF3	1778 aa		13.55	□□□□□ -0.24
ASIC1-204	ENST00000548350	SLX4	Q8IY92	1834 aa		13.55	□□□□□ -0.24
ASIC1-204	ENST00000548350	IRS4	O14654	1257 aa	Predicted RBP	13.55	□□□□□ -0.24
ASIC1-204	ENST00000548350	DDN	O94850	711 aa	Predicted RBP	13.55	□□□□□ -0.24
ASIC1-204	ENST00000548350	FLII	Q13045	1269 aa		13.55	□□□□□ -0.24
ASIC1-204	ENST00000548350	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.55	□□□□□ -0.24
ASIC1-204	ENST00000548350	ZNF428	Q96B54	188 aa		13.55	□□□□□ -0.24
ASIC1-204	ENST00000548350	CREBZF	Q9NS37	354 aa		13.55	□□□□□ -0.24
ASIC1-204	ENST00000548350	CACNA1S	Q13698	1873 aa		13.55	□□□□□ -0.24
ASIC1-204	ENST00000548350	PPEF1	O14829	653 aa	Predicted RBP	13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms