RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 MAP3K15Q6ZN16 1313 aa15.82■□□□□ 0.12
TRAFD1-205ENST00000548277 ERVV-1B6SEH8 477 aa15.81■□□□□ 0.12
TRAFD1-205ENST00000548277 EIF2S2P20042 333 aaKnown RBP15.81■□□□□ 0.12
TRAFD1-205ENST00000548277 EIF6P56537 245 aaKnown RBP15.81■□□□□ 0.12
TRAFD1-205ENST00000548277 FMR1Q06787 632 aaKnown RBP eCLIP15.81■□□□□ 0.124e-6■■□□□ 13.3
TRAFD1-205ENST00000548277 TAF1P21675 1872 aa15.8■□□□□ 0.12
TRAFD1-205ENST00000548277 UBN2Q6ZU65 1347 aa15.8■□□□□ 0.12
TRAFD1-205ENST00000548277 DEFB115Q30KQ5 88 aa15.8■□□□□ 0.12
TRAFD1-205ENST00000548277 PNMA8AQ86V59 439 aaPredicted RBP15.8■□□□□ 0.12
TRAFD1-205ENST00000548277 GPC2Q8N158 579 aa15.8■□□□□ 0.12
TRAFD1-205ENST00000548277 LARGE2Q8N3Y3 721 aa15.8■□□□□ 0.12
TRAFD1-205ENST00000548277 AIDAQ96BJ3 306 aa15.8■□□□□ 0.12
TRAFD1-205ENST00000548277 RBM17Q96I25 401 aaKnown RBP15.8■□□□□ 0.12
TRAFD1-205ENST00000548277 ABT1Q9ULW3 272 aaKnown RBP15.8■□□□□ 0.12
TRAFD1-205ENST00000548277 COL4A5P29400 1685 aa15.79■□□□□ 0.12
TRAFD1-205ENST00000548277 RGL2O15211 777 aa15.79■□□□□ 0.12
TRAFD1-205ENST00000548277 GRM1Q13255 1194 aa15.79■□□□□ 0.12
TRAFD1-205ENST00000548277 NFE2L2Q16236 605 aa15.79■□□□□ 0.12
TRAFD1-205ENST00000548277 C3orf67Q6ZVT6 689 aa15.79■□□□□ 0.12
TRAFD1-205ENST00000548277 NECTIN2Q92692 538 aa15.79■□□□□ 0.12
TRAFD1-205ENST00000548277 PLEKHF1Q96S99 279 aa15.79■□□□□ 0.12
TRAFD1-205ENST00000548277 TRPM7Q96QT4 1865 aa15.79■□□□□ 0.12
TRAFD1-205ENST00000548277 ADAMTSL1Q8N6G6 1762 aa15.79■□□□□ 0.12
TRAFD1-205ENST00000548277 LTBP1Q14766 1721 aa15.78■□□□□ 0.12
TRAFD1-205ENST00000548277 ANXA1P04083 346 aa15.78■□□□□ 0.12
TRAFD1-205ENST00000548277 LMOD1P29536 600 aaPredicted RBP15.78■□□□□ 0.12
TRAFD1-205ENST00000548277 EPS15P42566 896 aa15.78■□□□□ 0.12
TRAFD1-205ENST00000548277 LBX1P52954 281 aa15.78■□□□□ 0.12
TRAFD1-205ENST00000548277 CRY2Q49AN0 593 aa15.78■□□□□ 0.12
TRAFD1-205ENST00000548277 PAXIP1Q6ZW49 1069 aaPredicted RBP15.78■□□□□ 0.12
TRAFD1-205ENST00000548277 ZNF428Q96B54 188 aa15.78■□□□□ 0.12
TRAFD1-205ENST00000548277 PSMD1Q99460 953 aa15.78■□□□□ 0.12
TRAFD1-205ENST00000548277 MAPK8IP3Q9UPT6 1336 aa15.77■□□□□ 0.12
TRAFD1-205ENST00000548277 PPEF1O14829 653 aaPredicted RBP15.77■□□□□ 0.12
TRAFD1-205ENST00000548277 ZNF34Q8IZ26 560 aa15.77■□□□□ 0.12
TRAFD1-205ENST00000548277 CTCFP49711 727 aaPredicted RBP15.76■□□□□ 0.11
TRAFD1-205ENST00000548277 AIMP1Q12904 312 aaKnown RBP15.76■□□□□ 0.11
TRAFD1-205ENST00000548277 GIGYF2Q6Y7W6 1299 aaKnown RBP15.76■□□□□ 0.11
TRAFD1-205ENST00000548277 PPP1R42Q7Z4L9 355 aa15.76■□□□□ 0.11
TRAFD1-205ENST00000548277 NLRP3Q96P20 1036 aa15.76■□□□□ 0.11
TRAFD1-205ENST00000548277 TSPYL4Q9UJ04 414 aa15.76■□□□□ 0.11
TRAFD1-205ENST00000548277 LAMB2P55268 1798 aa15.75■□□□□ 0.11
TRAFD1-205ENST00000548277 PPIP5K2O43314 1243 aa15.75■□□□□ 0.11
TRAFD1-205ENST00000548277 NTSR2O95665 410 aa15.75■□□□□ 0.11
TRAFD1-205ENST00000548277 HOXA10P31260 410 aaPredicted RBP15.75■□□□□ 0.11
TRAFD1-205ENST00000548277 AOC3Q16853 763 aa15.75■□□□□ 0.11
TRAFD1-205ENST00000548277 CC2D2BQ6DHV5 1058 aa15.75■□□□□ 0.11
TRAFD1-205ENST00000548277 NIM1KQ8IY84 436 aa15.75■□□□□ 0.11
TRAFD1-205ENST00000548277 CRAMP1Q96RY5 1269 aa15.75■□□□□ 0.11
TRAFD1-205ENST00000548277 TMX4Q9H1E5 349 aaPredicted RBP15.75■□□□□ 0.11
TRAFD1-205ENST00000548277 WBP1LQ9NX94 342 aa15.75■□□□□ 0.11
TRAFD1-205ENST00000548277 SNED1Q8TER0 1413 aa15.75■□□□□ 0.11
TRAFD1-205ENST00000548277 POLR2AP24928 1970 aaKnown RBP15.75■□□□□ 0.11
TRAFD1-205ENST00000548277 WDR33Q9C0J8 1336 aaKnown RBP15.74■□□□□ 0.11
TRAFD1-205ENST00000548277 TRAF5O00463 557 aa15.74■□□□□ 0.11
TRAFD1-205ENST00000548277 SCNN1DP51172 638 aa15.74■□□□□ 0.11
TRAFD1-205ENST00000548277 RIPK4P57078 832 aa15.74■□□□□ 0.11
TRAFD1-205ENST00000548277 PROSER3Q2NL68 480 aa15.74■□□□□ 0.11
TRAFD1-205ENST00000548277 PRDM10Q9NQV6 1147 aa15.74■□□□□ 0.11
TRAFD1-205ENST00000548277 DDX21Q9NR30 783 aaKnown RBP eCLIP15.74■□□□□ 0.11
TRAFD1-205ENST00000548277 RASSF10A6NK89 507 aa15.73■□□□□ 0.11
TRAFD1-205ENST00000548277 NEUROD2Q15784 382 aa15.73■□□□□ 0.11
TRAFD1-205ENST00000548277 UTP14AQ9BVJ6 771 aaKnown RBP15.73■□□□□ 0.11
TRAFD1-205ENST00000548277 PNNQ9H307 717 aaKnown RBP15.73■□□□□ 0.11
TRAFD1-205ENST00000548277 HCLS1P14317 486 aaPredicted RBP15.72■□□□□ 0.11
TRAFD1-205ENST00000548277 PDIA6Q15084 440 aa15.72■□□□□ 0.11
TRAFD1-205ENST00000548277 PARP10Q53GL7 1025 aa15.72■□□□□ 0.11
TRAFD1-205ENST00000548277 CYP4F22Q6NT55 531 aa15.72■□□□□ 0.11
TRAFD1-205ENST00000548277 LAS1LQ9Y4W2 734 aaKnown RBP15.72■□□□□ 0.11
TRAFD1-205ENST00000548277 ANKRD36CQ5JPF3 1778 aa15.72■□□□□ 0.11
TRAFD1-205ENST00000548277 COPS6Q7L5N1 327 aa15.71■□□□□ 0.11
TRAFD1-205ENST00000548277 ATP6V0A2Q9Y487 856 aa15.71■□□□□ 0.11
TRAFD1-205ENST00000548277 ABCC4O15439 1325 aa15.7■□□□□ 0.1
TRAFD1-205ENST00000548277 CASP8AP2Q9UKL3 1982 aa15.7■□□□□ 0.1
TRAFD1-205ENST00000548277 HSPA8P11142 646 aaKnown RBP15.7■□□□□ 0.1
TRAFD1-205ENST00000548277 MAP2K1Q02750 393 aaPredicted RBP15.7■□□□□ 0.1
TRAFD1-205ENST00000548277 GRIPAP1Q4V328 841 aa15.7■□□□□ 0.1
TRAFD1-205ENST00000548277 CST9Q5W186 159 aa15.7■□□□□ 0.1
TRAFD1-205ENST00000548277 USP50Q70EL3 339 aaPredicted RBP15.7■□□□□ 0.1
TRAFD1-205ENST00000548277 XAGE3Q8WTP9 111 aa15.7■□□□□ 0.1
TRAFD1-205ENST00000548277 CXCL9Q07325 125 aa15.69■□□□□ 0.1
TRAFD1-205ENST00000548277 KRT24Q2M2I5 525 aa15.69■□□□□ 0.1
TRAFD1-205ENST00000548277 SLC10A5Q5PT55 438 aa15.69■□□□□ 0.1
TRAFD1-205ENST00000548277 DPP8Q6V1X1 898 aaPredicted RBP15.69■□□□□ 0.1
TRAFD1-205ENST00000548277 LRP10Q7Z4F1 713 aa15.69■□□□□ 0.1
TRAFD1-205ENST00000548277 CCDC146Q8IYE0 955 aa15.69■□□□□ 0.1
TRAFD1-205ENST00000548277 MPNDQ8N594 471 aa15.69■□□□□ 0.1
TRAFD1-205ENST00000548277 CAPNS2Q96L46 248 aa15.69■□□□□ 0.1
TRAFD1-205ENST00000548277 TSKSQ9UJT2 592 aa15.69■□□□□ 0.1
TRAFD1-205ENST00000548277 IBTKQ9P2D0 1353 aaPredicted RBP15.69■□□□□ 0.1
TRAFD1-205ENST00000548277 ERBB4Q15303 1308 aa15.68■□□□□ 0.1
TRAFD1-205ENST00000548277 RIC1Q4ADV7 1423 aa15.68■□□□□ 0.1
TRAFD1-205ENST00000548277 RAD17O75943 681 aa15.68■□□□□ 0.1
TRAFD1-205ENST00000548277 GPR101Q96P66 508 aaPredicted RBP15.68■□□□□ 0.1
TRAFD1-205ENST00000548277 BCL2L13Q9BXK5 485 aa15.68■□□□□ 0.1
TRAFD1-205ENST00000548277 ZNF408Q9H9D4 720 aa15.68■□□□□ 0.1
TRAFD1-205ENST00000548277 GPRC5DQ9NZD1 345 aa15.68■□□□□ 0.1
TRAFD1-205ENST00000548277 TRMT112Q9UI30 125 aaKnown RBP15.68■□□□□ 0.1
TRAFD1-205ENST00000548277 ZNRF3Q9ULT6 936 aa15.68■□□□□ 0.1
TRAFD1-205ENST00000548277 AOC2O75106 756 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms