RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 WASHC4Q2M389 1173 aa11.17□□□□□ -0.62
CALCOCO1-210ENST00000548263 DNAJC25Q9H1X3 360 aa11.17□□□□□ -0.62
CALCOCO1-210ENST00000548263 PDIA4P13667 645 aaKnown RBP11.16□□□□□ -0.62
CALCOCO1-210ENST00000548263 CEP57L1Q8IYX8 460 aa11.16□□□□□ -0.62
CALCOCO1-210ENST00000548263 ZBTB3Q9H5J0 574 aa11.16□□□□□ -0.62
CALCOCO1-210ENST00000548263 MAP3K2Q9Y2U5 619 aa11.16□□□□□ -0.62
CALCOCO1-210ENST00000548263 KIF24Q5T7B8 1368 aa11.16□□□□□ -0.62
CALCOCO1-210ENST00000548263 PIK3R4Q99570 1358 aa11.16□□□□□ -0.62
CALCOCO1-210ENST00000548263 PRAMEF22A3QJZ6 481 aa11.16□□□□□ -0.62
CALCOCO1-210ENST00000548263 HSPA4P34932 840 aa11.16□□□□□ -0.62
CALCOCO1-210ENST00000548263 CADPS2Q86UW7 1296 aa11.16□□□□□ -0.62
CALCOCO1-210ENST00000548263 PDLIM2Q96JY6 352 aa11.16□□□□□ -0.62
CALCOCO1-210ENST00000548263 PLEKHG1Q9ULL1 1385 aa11.16□□□□□ -0.62
CALCOCO1-210ENST00000548263 ADGRB1O14514 1584 aa11.16□□□□□ -0.62
CALCOCO1-210ENST00000548263 RIOK3O14730 519 aaKnown RBP11.16□□□□□ -0.62
CALCOCO1-210ENST00000548263 APPP05067 770 aa11.16□□□□□ -0.62
CALCOCO1-210ENST00000548263 SMAP1Q8IYB5 467 aaPredicted RBP11.16□□□□□ -0.62
CALCOCO1-210ENST00000548263 FAM177A1Q8N128 213 aaPredicted RBP11.16□□□□□ -0.62
CALCOCO1-210ENST00000548263 MYD88Q99836 296 aa11.16□□□□□ -0.62
CALCOCO1-210ENST00000548263 KRT32Q14532 448 aa11.15□□□□□ -0.62
CALCOCO1-210ENST00000548263 PDILTQ8N807 584 aa11.15□□□□□ -0.62
CALCOCO1-210ENST00000548263 IP6K1Q92551 441 aa11.15□□□□□ -0.62
CALCOCO1-210ENST00000548263 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.15□□□□□ -0.62
CALCOCO1-210ENST00000548263 V9GYY5 206 aaPredicted RBP11.15□□□□□ -0.62
CALCOCO1-210ENST00000548263 ERICH4A6NGS2 130 aa11.15□□□□□ -0.62
CALCOCO1-210ENST00000548263 CUL4AQ13619 759 aa11.15□□□□□ -0.62
CALCOCO1-210ENST00000548263 CPLX2Q6PUV4 134 aaKnown RBP11.15□□□□□ -0.62
CALCOCO1-210ENST00000548263 LRRC2Q9BYS8 371 aa11.15□□□□□ -0.62
CALCOCO1-210ENST00000548263 ARGLU1Q9NWB6 273 aaPredicted RBP11.15□□□□□ -0.62
CALCOCO1-210ENST00000548263 PTCH1Q13635 1447 aa11.15□□□□□ -0.62
CALCOCO1-210ENST00000548263 CCT2P78371 535 aaKnown RBP11.15□□□□□ -0.62
CALCOCO1-210ENST00000548263 USP6P35125 1406 aa11.15□□□□□ -0.63
CALCOCO1-210ENST00000548263 GTF2E1P29083 439 aaPredicted RBP11.14□□□□□ -0.63
CALCOCO1-210ENST00000548263 RALYLQ86SE5 291 aaKnown RBP11.14□□□□□ -0.63
CALCOCO1-210ENST00000548263 OSBPL3Q9H4L5 887 aa11.14□□□□□ -0.63
CALCOCO1-210ENST00000548263 RAD50Q92878 1312 aa11.14□□□□□ -0.63
CALCOCO1-210ENST00000548263 CYP2E1P05181 493 aaPredicted RBP11.14□□□□□ -0.63
CALCOCO1-210ENST00000548263 TEX35Q5T0J7 233 aa11.14□□□□□ -0.63
CALCOCO1-210ENST00000548263 KIF18AQ8NI77 898 aa11.14□□□□□ -0.63
CALCOCO1-210ENST00000548263 PODXL2Q9NZ53 605 aa11.14□□□□□ -0.63
CALCOCO1-210ENST00000548263 VWDEQ8N2E2 1590 aa11.14□□□□□ -0.63
CALCOCO1-210ENST00000548263 IQGAP1P46940 1657 aa11.14□□□□□ -0.63
CALCOCO1-210ENST00000548263 IQSEC2Q5JU85 1478 aa11.14□□□□□ -0.63
CALCOCO1-210ENST00000548263 NBPF7P0C2Y1 421 aaPredicted RBP11.14□□□□□ -0.63
CALCOCO1-210ENST00000548263 U2AF2P26368 475 aaKnown RBP eCLIP11.14□□□□□ -0.635e-10■■■□□ 16.8
CALCOCO1-210ENST00000548263 VPS53Q5VIR6 699 aa11.14□□□□□ -0.63
CALCOCO1-210ENST00000548263 RASEFQ8IZ41 740 aa11.14□□□□□ -0.63
CALCOCO1-210ENST00000548263 USP44Q9H0E7 712 aa11.14□□□□□ -0.63
CALCOCO1-210ENST00000548263 DBF4Q9UBU7 674 aaPredicted RBP11.14□□□□□ -0.63
CALCOCO1-210ENST00000548263 SBNO1A3KN83 1393 aa11.14□□□□□ -0.63
CALCOCO1-210ENST00000548263 TRDNQ13061 729 aa11.13□□□□□ -0.63
CALCOCO1-210ENST00000548263 CEP135Q66GS9 1140 aa11.13□□□□□ -0.63
CALCOCO1-210ENST00000548263 BCL2L12Q9HB09 334 aa11.13□□□□□ -0.63
CALCOCO1-210ENST00000548263 CGNQ9P2M7 1197 aaKnown RBP11.13□□□□□ -0.63
CALCOCO1-210ENST00000548263 CCDC66A2RUB6 948 aa11.13□□□□□ -0.63
CALCOCO1-210ENST00000548263 FAM135BQ49AJ0 1406 aa11.13□□□□□ -0.63
CALCOCO1-210ENST00000548263 CREB3L3Q68CJ9 461 aa11.13□□□□□ -0.63
CALCOCO1-210ENST00000548263 NCOA3Q9Y6Q9 1424 aa11.13□□□□□ -0.63
CALCOCO1-210ENST00000548263 NMIQ13287 307 aaPredicted RBP11.13□□□□□ -0.63
CALCOCO1-210ENST00000548263 KLHDC4Q8TBB5 520 aa11.13□□□□□ -0.63
CALCOCO1-210ENST00000548263 ANO10Q9NW15 660 aa11.13□□□□□ -0.63
CALCOCO1-210ENST00000548263 AXIN2Q9Y2T1 843 aa11.13□□□□□ -0.63
CALCOCO1-210ENST00000548263 KIAA0232Q92628 1395 aa11.13□□□□□ -0.63
CALCOCO1-210ENST00000548263 SERPINC1P01008 464 aa11.12□□□□□ -0.63
CALCOCO1-210ENST00000548263 TRIM29Q14134 588 aa11.12□□□□□ -0.63
CALCOCO1-210ENST00000548263 RUFY3Q7L099 469 aa11.12□□□□□ -0.63
CALCOCO1-210ENST00000548263 COPS6Q7L5N1 327 aa11.12□□□□□ -0.63
CALCOCO1-210ENST00000548263 DEPDC5O75140 1603 aa11.12□□□□□ -0.63
CALCOCO1-210ENST00000548263 NPHP3Q7Z494 1330 aa11.12□□□□□ -0.63
CALCOCO1-210ENST00000548263 ARHGEF40Q8TER5 1519 aa11.12□□□□□ -0.63
CALCOCO1-210ENST00000548263 SKILP12757 684 aa11.12□□□□□ -0.63
CALCOCO1-210ENST00000548263 CCAR1Q8IX12 1150 aaKnown RBP11.12□□□□□ -0.63
CALCOCO1-210ENST00000548263 FSIP1Q8NA03 581 aa11.12□□□□□ -0.63
CALCOCO1-210ENST00000548263 BRF1Q92994 677 aa11.12□□□□□ -0.63
CALCOCO1-210ENST00000548263 REREQ9P2R6 1566 aa11.12□□□□□ -0.63
CALCOCO1-210ENST00000548263 BIN1O00499 593 aa11.12□□□□□ -0.63
CALCOCO1-210ENST00000548263 GPTP24298 496 aa11.12□□□□□ -0.63
CALCOCO1-210ENST00000548263 LRRFIP1Q32MZ4 808 aaKnown RBP11.12□□□□□ -0.63
CALCOCO1-210ENST00000548263 UBE3BQ7Z3V4 1068 aa11.12□□□□□ -0.63
CALCOCO1-210ENST00000548263 NEK1Q96PY6 1258 aa11.12□□□□□ -0.63
CALCOCO1-210ENST00000548263 ATP2B1P20020 1258 aa11.11□□□□□ -0.63
CALCOCO1-210ENST00000548263 AMOTQ4VCS5 1084 aa11.11□□□□□ -0.63
CALCOCO1-210ENST00000548263 STK11IPQ8N1F8 1099 aa11.11□□□□□ -0.63
CALCOCO1-210ENST00000548263 CCDC34Q96HJ3 373 aa11.11□□□□□ -0.63
CALCOCO1-210ENST00000548263 MAP3K5Q99683 1374 aa11.11□□□□□ -0.63
CALCOCO1-210ENST00000548263 SFPQP23246 707 aaKnown RBP eCLIP11.11□□□□□ -0.63
CALCOCO1-210ENST00000548263 LARP1Q6PKG0 1096 aaKnown RBP11.11□□□□□ -0.63
CALCOCO1-210ENST00000548263 NFXL1Q6ZNB6 911 aa11.11□□□□□ -0.63
CALCOCO1-210ENST00000548263 XAGE3Q8WTP9 111 aa11.11□□□□□ -0.63
CALCOCO1-210ENST00000548263 PYCARDQ9ULZ3 195 aa11.11□□□□□ -0.63
CALCOCO1-210ENST00000548263 PAXBP1Q9Y5B6 917 aa11.11□□□□□ -0.63
CALCOCO1-210ENST00000548263 CPS1P31327 1500 aa11.11□□□□□ -0.63
CALCOCO1-210ENST00000548263 TMEM94Q12767 1356 aa11.11□□□□□ -0.63
CALCOCO1-210ENST00000548263 OLFM4Q6UX06 510 aa11.11□□□□□ -0.63
CALCOCO1-210ENST00000548263 LIG1P18858 919 aa11.1□□□□□ -0.63
CALCOCO1-210ENST00000548263 PTH1RQ03431 593 aa11.1□□□□□ -0.63
CALCOCO1-210ENST00000548263 LRMPQ12912 555 aa11.1□□□□□ -0.63
CALCOCO1-210ENST00000548263 FAM227BQ96M60 508 aa11.1□□□□□ -0.63
CALCOCO1-210ENST00000548263 MTMR6Q9Y217 621 aa11.1□□□□□ -0.63
CALCOCO1-210ENST00000548263 TTC41PQ6P2S7 1318 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms