RNA–Protein interactions for RNA: ENST00000548220.1

PTPRR-207, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,374 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-207ENST00000548220 SLC27A3Q5K4L6 730 aa7.99□□□□□ -1.13
PTPRR-207ENST00000548220 CCDC30Q5VVM6 783 aa7.99□□□□□ -1.13
PTPRR-207ENST00000548220 ARHGAP45Q92619 1136 aa7.99□□□□□ -1.13
PTPRR-207ENST00000548220 LARP6Q9BRS8 491 aaKnown RBP7.99□□□□□ -1.13
PTPRR-207ENST00000548220 ATG3Q9NT62 314 aa7.99□□□□□ -1.13
PTPRR-207ENST00000548220 IBTKQ9P2D0 1353 aaPredicted RBP7.99□□□□□ -1.13
PTPRR-207ENST00000548220 LAMB4A4D0S4 1761 aa7.99□□□□□ -1.13
PTPRR-207ENST00000548220 KCPQ6ZWJ8 1503 aa7.99□□□□□ -1.13
PTPRR-207ENST00000548220 MS4A1P11836 297 aa7.98□□□□□ -1.13
PTPRR-207ENST00000548220 EXOSC9Q06265 439 aaKnown RBP7.98□□□□□ -1.13
PTPRR-207ENST00000548220 RC3H1Q5TC82 1133 aaKnown RBP7.98□□□□□ -1.13
PTPRR-207ENST00000548220 ZNF496Q96IT1 587 aaPredicted RBP7.98□□□□□ -1.13
PTPRR-207ENST00000548220 ADAM33Q9BZ11 813 aa7.98□□□□□ -1.13
PTPRR-207ENST00000548220 RCAN3Q9UKA8 241 aa7.98□□□□□ -1.13
PTPRR-207ENST00000548220 RNF123Q5XPI4 1314 aa7.98□□□□□ -1.13
PTPRR-207ENST00000548220 PPP1R3GB7ZBB8 358 aa7.97□□□□□ -1.13
PTPRR-207ENST00000548220 IPO8O15397 1037 aaKnown RBP7.97□□□□□ -1.13
PTPRR-207ENST00000548220 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.97□□□□□ -1.13
PTPRR-207ENST00000548220 C8orf58Q8NAV2 365 aa7.97□□□□□ -1.13
PTPRR-207ENST00000548220 HYPKQ9NX55 129 aa7.97□□□□□ -1.13
PTPRR-207ENST00000548220 DBF4Q9UBU7 674 aaPredicted RBP7.97□□□□□ -1.13
PTPRR-207ENST00000548220 LAS1LQ9Y4W2 734 aaKnown RBP7.97□□□□□ -1.13
PTPRR-207ENST00000548220 KIF16BQ96L93 1317 aa7.97□□□□□ -1.13
PTPRR-207ENST00000548220 LOC102724428A0A0B4J2F2 783 aa7.97□□□□□ -1.13
PTPRR-207ENST00000548220 RARSP54136 660 aaKnown RBP7.97□□□□□ -1.13
PTPRR-207ENST00000548220 SIK1P57059 783 aa7.97□□□□□ -1.13
PTPRR-207ENST00000548220 AAMPQ13685 434 aa7.97□□□□□ -1.13
PTPRR-207ENST00000548220 MFSD10Q14728 455 aa7.97□□□□□ -1.13
PTPRR-207ENST00000548220 TPRNQ4KMQ1 711 aa7.97□□□□□ -1.13
PTPRR-207ENST00000548220 PTF1AQ7RTS3 328 aa7.97□□□□□ -1.13
PTPRR-207ENST00000548220 TSR2Q969E8 191 aaKnown RBP7.97□□□□□ -1.13
PTPRR-207ENST00000548220 STK31Q9BXU1 1019 aa7.97□□□□□ -1.13
PTPRR-207ENST00000548220 DDX21Q9NR30 783 aaKnown RBP eCLIP7.97□□□□□ -1.13
PTPRR-207ENST00000548220 ASAP1Q9ULH1 1129 aa7.97□□□□□ -1.13
PTPRR-207ENST00000548220 PALLDQ8WX93 1383 aa7.96□□□□□ -1.13
PTPRR-207ENST00000548220 C5P01031 1676 aa7.96□□□□□ -1.13
PTPRR-207ENST00000548220 TAF1LQ8IZX4 1826 aa7.96□□□□□ -1.13
PTPRR-207ENST00000548220 PTPRCP08575 1304 aa7.96□□□□□ -1.14
PTPRR-207ENST00000548220 COL5A3P25940 1745 aaPredicted RBP7.96□□□□□ -1.14
PTPRR-207ENST00000548220 KCNQ2O43526 872 aa7.96□□□□□ -1.14
PTPRR-207ENST00000548220 PDE3AQ14432 1141 aa7.96□□□□□ -1.14
PTPRR-207ENST00000548220 SYTL4Q96C24 671 aaPredicted RBP7.96□□□□□ -1.14
PTPRR-207ENST00000548220 MIS18AQ9NYP9 233 aa7.96□□□□□ -1.14
PTPRR-207ENST00000548220 RREB1Q92766 1687 aa7.95□□□□□ -1.14
PTPRR-207ENST00000548220 TNS1Q9HBL0 1735 aaKnown RBP7.95□□□□□ -1.14
PTPRR-207ENST00000548220 SLC39A6Q13433 755 aa7.95□□□□□ -1.14
PTPRR-207ENST00000548220 HDGFL1Q5TGJ6 251 aa7.95□□□□□ -1.14
PTPRR-207ENST00000548220 ERICH6BQ5W0A0 696 aa7.95□□□□□ -1.14
PTPRR-207ENST00000548220 TSPYL6Q8N831 410 aa7.95□□□□□ -1.14
PTPRR-207ENST00000548220 ANKK1Q8NFD2 765 aa7.95□□□□□ -1.14
PTPRR-207ENST00000548220 FBXW7Q969H0 707 aa7.95□□□□□ -1.14
PTPRR-207ENST00000548220 CHMP4BQ9H444 224 aaKnown RBP7.95□□□□□ -1.14
PTPRR-207ENST00000548220 RABGEF1Q9UJ41 708 aa7.95□□□□□ -1.14
PTPRR-207ENST00000548220 CNTNAP4Q9C0A0 1308 aa7.94□□□□□ -1.14
PTPRR-207ENST00000548220 MYH14Q7Z406 1995 aaKnown RBP7.94□□□□□ -1.14
PTPRR-207ENST00000548220 KCNQ3O43525 872 aa7.94□□□□□ -1.14
PTPRR-207ENST00000548220 CYP19A1P11511 503 aaPredicted RBP7.94□□□□□ -1.14
PTPRR-207ENST00000548220 IL6STP40189 918 aaPredicted RBP7.94□□□□□ -1.14
PTPRR-207ENST00000548220 DEFB132Q7Z7B7 95 aa7.94□□□□□ -1.14
PTPRR-207ENST00000548220 SSH1Q8WYL5 1049 aa7.94□□□□□ -1.14
PTPRR-207ENST00000548220 ACSBG1Q96GR2 724 aa7.94□□□□□ -1.14
PTPRR-207ENST00000548220 IRX2Q9BZI1 471 aaPredicted RBP7.94□□□□□ -1.14
PTPRR-207ENST00000548220 TJP1Q07157 1748 aa7.94□□□□□ -1.14
PTPRR-207ENST00000548220 A0A087WZG4 1122 aa7.93□□□□□ -1.14
PTPRR-207ENST00000548220 PTCD1O75127 700 aaKnown RBP7.93□□□□□ -1.14
PTPRR-207ENST00000548220 TRIM37O94972 964 aa7.93□□□□□ -1.14
PTPRR-207ENST00000548220 DDX58O95786 925 aaKnown RBP7.93□□□□□ -1.14
PTPRR-207ENST00000548220 ATP6V1AP38606 617 aa7.93□□□□□ -1.14
PTPRR-207ENST00000548220 SF3B2Q13435 895 aaKnown RBP7.93□□□□□ -1.14
PTPRR-207ENST00000548220 TYW1BQ6NUM6 668 aa7.93□□□□□ -1.14
PTPRR-207ENST00000548220 FLAD1Q8NFF5 587 aa7.93□□□□□ -1.14
PTPRR-207ENST00000548220 API5Q9BZZ5 524 aaKnown RBP7.93□□□□□ -1.14
PTPRR-207ENST00000548220 ERVV-1B6SEH8 477 aa7.92□□□□□ -1.14
PTPRR-207ENST00000548220 BAG6P46379 1132 aa7.92□□□□□ -1.14
PTPRR-207ENST00000548220 EIF5P55010 431 aaKnown RBP7.92□□□□□ -1.14
PTPRR-207ENST00000548220 PDIA6Q15084 440 aa7.92□□□□□ -1.14
PTPRR-207ENST00000548220 ATF7IPQ6VMQ6 1270 aa7.92□□□□□ -1.14
PTPRR-207ENST00000548220 LAPTM4BQ86VI4 370 aa7.92□□□□□ -1.14
PTPRR-207ENST00000548220 SLC4A9Q96Q91 983 aa7.92□□□□□ -1.14
PTPRR-207ENST00000548220 SMC4Q9NTJ3 1288 aa7.92□□□□□ -1.14
PTPRR-207ENST00000548220 CCDC87Q9NVE4 849 aa7.92□□□□□ -1.14
PTPRR-207ENST00000548220 PCDHGA10Q9Y5H3 936 aa7.92□□□□□ -1.14
PTPRR-207ENST00000548220 USP16Q9Y5T5 823 aa7.92□□□□□ -1.14
PTPRR-207ENST00000548220 QSER1Q2KHR3 1735 aa7.92□□□□□ -1.14
PTPRR-207ENST00000548220 N4BP2Q86UW6 1770 aaPredicted RBP7.91□□□□□ -1.14
PTPRR-207ENST00000548220 PXDNLA1KZ92 1463 aa7.91□□□□□ -1.14
PTPRR-207ENST00000548220 RPS6KA4O75676 772 aa7.91□□□□□ -1.14
PTPRR-207ENST00000548220 PHF14O94880 888 aa7.91□□□□□ -1.14
PTPRR-207ENST00000548220 APBA3O96018 575 aa7.91□□□□□ -1.14
PTPRR-207ENST00000548220 TRIM28Q13263 835 aaKnown RBP7.91□□□□□ -1.14
PTPRR-207ENST00000548220 TXNRD1Q16881 649 aa7.91□□□□□ -1.14
PTPRR-207ENST00000548220 ZKSCAN2Q63HK3 967 aa7.91□□□□□ -1.14
PTPRR-207ENST00000548220 CLEC4GQ6UXB4 293 aa7.91□□□□□ -1.14
PTPRR-207ENST00000548220 LRP10Q7Z4F1 713 aa7.91□□□□□ -1.14
PTPRR-207ENST00000548220 NPM2Q86SE8 214 aaKnown RBP7.91□□□□□ -1.14
PTPRR-207ENST00000548220 EMILIN3Q9NT22 766 aa7.91□□□□□ -1.14
PTPRR-207ENST00000548220 CCNL1Q9UK58 526 aaPredicted RBP7.91□□□□□ -1.14
PTPRR-207ENST00000548220 HDAC5Q9UQL6 1122 aa7.91□□□□□ -1.14
PTPRR-207ENST00000548220 C4BP0C0L5 1744 aa7.9□□□□□ -1.14
PTPRR-207ENST00000548220 SENP3-EIF4A1A0A087X0R7 540 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms