RNA–Protein interactions for RNA: ENST00000548032.6

SEC23A-204, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-204ENST00000548032 RPGRQ92834 1020 aaKnown RBP18.71■□□□□ 0.59
SEC23A-204ENST00000548032 NMRK2Q9NPI5 230 aa18.71■□□□□ 0.59
SEC23A-204ENST00000548032 LMNB1P20700 586 aa18.7■□□□□ 0.58
SEC23A-204ENST00000548032 PRELPP51888 382 aa18.7■□□□□ 0.58
SEC23A-204ENST00000548032 GOLGA2Q08379 1002 aa18.7■□□□□ 0.58
SEC23A-204ENST00000548032 PHAXQ9H814 394 aaKnown RBP18.7■□□□□ 0.58
SEC23A-204ENST00000548032 TNRC6CQ9HCJ0 1690 aaKnown RBP18.69■□□□□ 0.58
SEC23A-204ENST00000548032 TCERG1O14776 1098 aaKnown RBP18.69■□□□□ 0.58
SEC23A-204ENST00000548032 SOGA3Q5TF21 947 aa18.69■□□□□ 0.58
SEC23A-204ENST00000548032 WDR63Q8IWG1 891 aa18.69■□□□□ 0.58
SEC23A-204ENST00000548032 CHMP4AQ9BY43 222 aa18.69■□□□□ 0.58
SEC23A-204ENST00000548032 TRMT112Q9UI30 125 aaKnown RBP18.69■□□□□ 0.58
SEC23A-204ENST00000548032 ATP5J2-PTCD1G3V325 749 aa18.68■□□□□ 0.58
SEC23A-204ENST00000548032 ALDH1B1P30837 517 aa18.68■□□□□ 0.58
SEC23A-204ENST00000548032 TWISTNBQ3B726 338 aaPredicted RBP18.68■□□□□ 0.58
SEC23A-204ENST00000548032 CRY2Q49AN0 593 aa18.68■□□□□ 0.58
SEC23A-204ENST00000548032 C3orf67Q6ZVT6 689 aa18.68■□□□□ 0.58
SEC23A-204ENST00000548032 RIC3Q7Z5B4 369 aa18.68■□□□□ 0.58
SEC23A-204ENST00000548032 NLRP3Q96P20 1036 aa18.68■□□□□ 0.58
SEC23A-204ENST00000548032 TAOK3Q9H2K8 898 aa18.68■□□□□ 0.58
SEC23A-204ENST00000548032 FANCIQ9NVI1 1328 aa18.68■□□□□ 0.58
SEC23A-204ENST00000548032 SLX4Q8IY92 1834 aa18.67■□□□□ 0.58
SEC23A-204ENST00000548032 CCDC93Q567U6 631 aa18.67■□□□□ 0.58
SEC23A-204ENST00000548032 OLFM4Q6UX06 510 aa18.67■□□□□ 0.58
SEC23A-204ENST00000548032 SYNE4Q8N205 404 aa18.67■□□□□ 0.58
SEC23A-204ENST00000548032 C7orf43Q8WVR3 580 aa18.67■□□□□ 0.58
SEC23A-204ENST00000548032 STK31Q9BXU1 1019 aa18.67■□□□□ 0.58
SEC23A-204ENST00000548032 RIC1Q4ADV7 1423 aa18.66■□□□□ 0.58
SEC23A-204ENST00000548032 HCLS1P14317 486 aaPredicted RBP18.66■□□□□ 0.58
SEC23A-204ENST00000548032 APLP1P51693 650 aa18.66■□□□□ 0.58
SEC23A-204ENST00000548032 RBM17Q96I25 401 aaKnown RBP18.66■□□□□ 0.58
SEC23A-204ENST00000548032 RNF123Q5XPI4 1314 aa18.66■□□□□ 0.58
SEC23A-204ENST00000548032 SH3TC1Q8TE82 1336 aa18.66■□□□□ 0.58
SEC23A-204ENST00000548032 SLC10A5Q5PT55 438 aa18.65■□□□□ 0.58
SEC23A-204ENST00000548032 IFFO2Q5TF58 517 aa18.65■□□□□ 0.58
SEC23A-204ENST00000548032 ISCA1Q9BUE6 129 aa18.65■□□□□ 0.58
SEC23A-204ENST00000548032 CACNA1SQ13698 1873 aa18.65■□□□□ 0.58
SEC23A-204ENST00000548032 DDX58O95786 925 aaKnown RBP18.64■□□□□ 0.57
SEC23A-204ENST00000548032 HOXA10P31260 410 aaPredicted RBP18.64■□□□□ 0.57
SEC23A-204ENST00000548032 RTL5Q5HYW3 569 aaPredicted RBP18.64■□□□□ 0.57
SEC23A-204ENST00000548032 C16orf71Q8IYS4 520 aaPredicted RBP18.64■□□□□ 0.57
SEC23A-204ENST00000548032 MYD88Q99836 296 aa18.64■□□□□ 0.57
SEC23A-204ENST00000548032 KDM2BQ8NHM5 1336 aa18.64■□□□□ 0.57
SEC23A-204ENST00000548032 EXOSC9Q06265 439 aaKnown RBP18.63■□□□□ 0.57
SEC23A-204ENST00000548032 FAM89AQ96GI7 184 aa18.63■□□□□ 0.57
SEC23A-204ENST00000548032 SPINK5Q9NQ38 1064 aaPredicted RBP18.63■□□□□ 0.57
SEC23A-204ENST00000548032 LTBP3Q9NS15 1303 aa18.63■□□□□ 0.57
SEC23A-204ENST00000548032 ANKRD36CQ5JPF3 1778 aa18.63■□□□□ 0.57
SEC23A-204ENST00000548032 PPEF1O14829 653 aaPredicted RBP18.62■□□□□ 0.57
SEC23A-204ENST00000548032 RTKN2Q8IZC4 609 aa18.62■□□□□ 0.57
SEC23A-204ENST00000548032 RBM46Q8TBY0 533 aaKnown RBP18.62■□□□□ 0.57
SEC23A-204ENST00000548032 CRAMP1Q96RY5 1269 aa18.62■□□□□ 0.57
SEC23A-204ENST00000548032 MYH16Q9H6N6 1097 aa18.62■□□□□ 0.57
SEC23A-204ENST00000548032 ARFGEF2Q9Y6D5 1785 aa18.61■□□□□ 0.57
SEC23A-204ENST00000548032 ZC3H4Q9UPT8 1303 aaKnown RBP18.61■□□□□ 0.57
SEC23A-204ENST00000548032 SLC4A2P04920 1241 aa18.61■□□□□ 0.57
SEC23A-204ENST00000548032 FKBP4Q02790 459 aaKnown RBP eCLIP18.61■□□□□ 0.57
SEC23A-204ENST00000548032 ZNF277Q9NRM2 450 aaPredicted RBP18.61■□□□□ 0.57
SEC23A-204ENST00000548032 MAP3K2Q9Y2U5 619 aa18.61■□□□□ 0.57
SEC23A-204ENST00000548032 SBF1O95248 1867 aa18.6■□□□□ 0.57
SEC23A-204ENST00000548032 TRIM28Q13263 835 aaKnown RBP18.6■□□□□ 0.57
SEC23A-204ENST00000548032 G2E3Q7L622 706 aa18.6■□□□□ 0.57
SEC23A-204ENST00000548032 SLC51AQ86UW1 340 aa18.6■□□□□ 0.57
SEC23A-204ENST00000548032 METTL22Q9BUU2 404 aaPredicted RBP18.6■□□□□ 0.57
SEC23A-204ENST00000548032 RRAGCQ9HB90 399 aa18.6■□□□□ 0.57
SEC23A-204ENST00000548032 FER1L6Q2WGJ9 1857 aa18.59■□□□□ 0.57
SEC23A-204ENST00000548032 ABCC4O15439 1325 aa18.59■□□□□ 0.57
SEC23A-204ENST00000548032 PI4KAP2A4QPH2 592 aa18.59■□□□□ 0.57
SEC23A-204ENST00000548032 VAMP4O75379 141 aa18.59■□□□□ 0.57
SEC23A-204ENST00000548032 DDX46Q7L014 1031 aaKnown RBP18.59■□□□□ 0.57
SEC23A-204ENST00000548032 DNAJC5GQ8N7S2 189 aa18.59■□□□□ 0.57
SEC23A-204ENST00000548032 PI4KAP1Q8N8J0 262 aa18.59■□□□□ 0.57
SEC23A-204ENST00000548032 TMX4Q9H1E5 349 aaPredicted RBP18.59■□□□□ 0.57
SEC23A-204ENST00000548032 GLTPD2A6NH11 291 aa18.58■□□□□ 0.56
SEC23A-204ENST00000548032 CCER2I3L3R5 266 aa18.58■□□□□ 0.56
SEC23A-204ENST00000548032 IRS4O14654 1257 aaPredicted RBP18.58■□□□□ 0.56
SEC23A-204ENST00000548032 CC2D2BQ6DHV5 1058 aa18.58■□□□□ 0.56
SEC23A-204ENST00000548032 KSR2Q6VAB6 950 aa18.58■□□□□ 0.56
SEC23A-204ENST00000548032 JARID2Q92833 1246 aaPredicted RBP18.58■□□□□ 0.56
SEC23A-204ENST00000548032 CWC25Q9NXE8 425 aaPredicted RBP18.58■□□□□ 0.56
SEC23A-204ENST00000548032 FSTL1Q12841 308 aa18.57■□□□□ 0.56
SEC23A-204ENST00000548032 DPY19L2Q6NUT2 758 aa18.57■□□□□ 0.56
SEC23A-204ENST00000548032 ZBTB38Q8NAP3 1195 aaPredicted RBP18.57■□□□□ 0.56
SEC23A-204ENST00000548032 CCDC191Q8NCU4 936 aa18.57■□□□□ 0.56
SEC23A-204ENST00000548032 FLIIQ13045 1269 aa18.56■□□□□ 0.56
SEC23A-204ENST00000548032 TIAM2Q8IVF5 1701 aa18.56■□□□□ 0.56
SEC23A-204ENST00000548032 ZNF521Q96K83 1311 aa18.55■□□□□ 0.56
SEC23A-204ENST00000548032 IARSP41252 1262 aaKnown RBP18.55■□□□□ 0.56
SEC23A-204ENST00000548032 NEXNQ0ZGT2 675 aa18.55■□□□□ 0.56
SEC23A-204ENST00000548032 FKBP5Q13451 457 aaPredicted RBP18.55■□□□□ 0.56
SEC23A-204ENST00000548032 GRAPQ13588 217 aa18.55■□□□□ 0.56
SEC23A-204ENST00000548032 GRAPLQ8TC17 118 aaPredicted RBP18.55■□□□□ 0.56
SEC23A-204ENST00000548032 PSMD1Q99460 953 aa18.55■□□□□ 0.56
SEC23A-204ENST00000548032 ATP6V0A2Q9Y487 856 aa18.55■□□□□ 0.56
SEC23A-204ENST00000548032 BBOX1O75936 387 aa18.54■□□□□ 0.56
SEC23A-204ENST00000548032 HTRA3P83110 453 aa18.54■□□□□ 0.56
SEC23A-204ENST00000548032 CCDC88AQ3V6T2 1871 aa18.54■□□□□ 0.56
SEC23A-204ENST00000548032 PCCAP05165 728 aaPredicted RBP18.53■□□□□ 0.56
SEC23A-204ENST00000548032 IGKV5-2P06315 115 aa18.53■□□□□ 0.56
SEC23A-204ENST00000548032 SF3B3Q15393 1217 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms