RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 MASTLQ96GX5 879 aa24.06■■□□□ 1.44
PRPF40B-206ENST00000547764 ISCA1Q9BUE6 129 aa24.06■■□□□ 1.44
PRPF40B-206ENST00000547764 ATP5J2-PTCD1G3V325 749 aa24.05■■□□□ 1.44
PRPF40B-206ENST00000547764 DDX58O95786 925 aaKnown RBP24.05■■□□□ 1.44
PRPF40B-206ENST00000547764 SLFN5Q08AF3 891 aa24.05■■□□□ 1.44
PRPF40B-206ENST00000547764 G2E3Q7L622 706 aa24.05■■□□□ 1.44
PRPF40B-206ENST00000547764 CNKSR1Q969H4 720 aa24.04■■□□□ 1.44
PRPF40B-206ENST00000547764 ZNF428Q96B54 188 aa24.04■■□□□ 1.44
PRPF40B-206ENST00000547764 CDCA7LQ96GN5 454 aa24.04■■□□□ 1.44
PRPF40B-206ENST00000547764 ARFGEF2Q9Y6D5 1785 aa24.03■■□□□ 1.44
PRPF40B-206ENST00000547764 NPR1P16066 1061 aa24.03■■□□□ 1.44
PRPF40B-206ENST00000547764 TRMT112Q9UI30 125 aaKnown RBP24.03■■□□□ 1.44
PRPF40B-206ENST00000547764 RNF123Q5XPI4 1314 aa24.03■■□□□ 1.44
PRPF40B-206ENST00000547764 RIC1Q4ADV7 1423 aa24.02■■□□□ 1.44
PRPF40B-206ENST00000547764 TNRC6CQ9HCJ0 1690 aaKnown RBP24.02■■□□□ 1.44
PRPF40B-206ENST00000547764 TRIM28Q13263 835 aaKnown RBP24.02■■□□□ 1.44
PRPF40B-206ENST00000547764 CRY2Q49AN0 593 aa24.02■■□□□ 1.44
PRPF40B-206ENST00000547764 SLC10A5Q5PT55 438 aa24.02■■□□□ 1.44
PRPF40B-206ENST00000547764 KSR2Q6VAB6 950 aa24.02■■□□□ 1.44
PRPF40B-206ENST00000547764 SYNE4Q8N205 404 aa24.02■■□□□ 1.44
PRPF40B-206ENST00000547764 MYD88Q99836 296 aa24.02■■□□□ 1.44
PRPF40B-206ENST00000547764 PI4KAP2A4QPH2 592 aa24.01■■□□□ 1.43
PRPF40B-206ENST00000547764 PI4KAP1Q8N8J0 262 aa24.01■■□□□ 1.43
PRPF40B-206ENST00000547764 METTL22Q9BUU2 404 aaPredicted RBP24.01■■□□□ 1.43
PRPF40B-206ENST00000547764 MAP3K2Q9Y2U5 619 aa24.01■■□□□ 1.43
PRPF40B-206ENST00000547764 FLIIQ13045 1269 aa24■■□□□ 1.43
PRPF40B-206ENST00000547764 PRPF40BQ6NWY9 871 aaKnown RBP24■■□□□ 1.43
PRPF40B-206ENST00000547764 C3orf67Q6ZVT6 689 aa24■■□□□ 1.43
PRPF40B-206ENST00000547764 SH3TC1Q8TE82 1336 aa24■■□□□ 1.43
PRPF40B-206ENST00000547764 C21orf2O43822 256 aa23.99■■□□□ 1.43
PRPF40B-206ENST00000547764 NLRP3Q96P20 1036 aa23.99■■□□□ 1.43
PRPF40B-206ENST00000547764 ZNF219Q9P2Y4 722 aaPredicted RBP23.99■■□□□ 1.43
PRPF40B-206ENST00000547764 ADCY9O60503 1353 aa23.99■■□□□ 1.43
PRPF40B-206ENST00000547764 SLX4Q8IY92 1834 aa23.98■■□□□ 1.43
PRPF40B-206ENST00000547764 HCLS1P14317 486 aaPredicted RBP23.98■■□□□ 1.43
PRPF40B-206ENST00000547764 TRMT2AQ8IZ69 625 aaKnown RBP23.98■■□□□ 1.43
PRPF40B-206ENST00000547764 CACNA1FO60840 1977 aa23.98■■□□□ 1.43
PRPF40B-206ENST00000547764 RPGRQ92834 1020 aaKnown RBP23.97■■□□□ 1.43
PRPF40B-206ENST00000547764 FAM89AQ96GI7 184 aa23.97■■□□□ 1.43
PRPF40B-206ENST00000547764 ALDH1B1P30837 517 aa23.96■■□□□ 1.43
PRPF40B-206ENST00000547764 HOXA10P31260 410 aaPredicted RBP23.96■■□□□ 1.43
PRPF40B-206ENST00000547764 FKBP5Q13451 457 aaPredicted RBP23.96■■□□□ 1.43
PRPF40B-206ENST00000547764 CCDC191Q8NCU4 936 aa23.96■■□□□ 1.43
PRPF40B-206ENST00000547764 RTL5Q5HYW3 569 aaPredicted RBP23.95■■□□□ 1.42
PRPF40B-206ENST00000547764 ZNF784Q8NCA9 323 aaPredicted RBP23.95■■□□□ 1.42
PRPF40B-206ENST00000547764 C7orf43Q8WVR3 580 aa23.95■■□□□ 1.42
PRPF40B-206ENST00000547764 CACNA1SQ13698 1873 aa23.95■■□□□ 1.42
PRPF40B-206ENST00000547764 RASSF7Q02833 373 aa23.94■■□□□ 1.42
PRPF40B-206ENST00000547764 RBM17Q96I25 401 aaKnown RBP23.94■■□□□ 1.42
PRPF40B-206ENST00000547764 CWC25Q9NXE8 425 aaPredicted RBP23.94■■□□□ 1.42
PRPF40B-206ENST00000547764 IGKV5-2P06315 115 aa23.93■■□□□ 1.42
PRPF40B-206ENST00000547764 HNRNPUQ00839 825 aaKnown RBP eCLIP23.93■■□□□ 1.42
PRPF40B-206ENST00000547764 NEXNQ0ZGT2 675 aa23.93■■□□□ 1.42
PRPF40B-206ENST00000547764 ZBTB38Q8NAP3 1195 aaPredicted RBP23.93■■□□□ 1.42
PRPF40B-206ENST00000547764 NFKBIEO00221 500 aa23.92■■□□□ 1.42
PRPF40B-206ENST00000547764 C9orf131Q5VYM1 1079 aa23.92■■□□□ 1.42
PRPF40B-206ENST00000547764 DNAAF4Q8WXU2 420 aa23.92■■□□□ 1.42
PRPF40B-206ENST00000547764 CRAMP1Q96RY5 1269 aa23.92■■□□□ 1.42
PRPF40B-206ENST00000547764 IRS4O14654 1257 aaPredicted RBP23.91■■□□□ 1.42
PRPF40B-206ENST00000547764 SOGA3Q5TF21 947 aa23.91■■□□□ 1.42
PRPF40B-206ENST00000547764 NEURL1BA8MQ27 555 aa23.9■■□□□ 1.42
PRPF40B-206ENST00000547764 PCCAP05165 728 aaPredicted RBP23.9■■□□□ 1.42
PRPF40B-206ENST00000547764 CWF19L2Q2TBE0 894 aaKnown RBP23.9■■□□□ 1.42
PRPF40B-206ENST00000547764 OLFM4Q6UX06 510 aa23.9■■□□□ 1.42
PRPF40B-206ENST00000547764 JARID2Q92833 1246 aaPredicted RBP23.9■■□□□ 1.42
PRPF40B-206ENST00000547764 LAMB2P55268 1798 aa23.89■■□□□ 1.42
PRPF40B-206ENST00000547764 PRELPP51888 382 aa23.89■■□□□ 1.41
PRPF40B-206ENST00000547764 MRPL50Q8N5N7 158 aaKnown RBP23.89■■□□□ 1.41
PRPF40B-206ENST00000547764 RNF181Q9P0P0 153 aa23.89■■□□□ 1.41
PRPF40B-206ENST00000547764 DDX60Q8IY21 1712 aaKnown RBP23.89■■□□□ 1.41
PRPF40B-206ENST00000547764 SBF1O95248 1867 aa23.89■■□□□ 1.41
PRPF40B-206ENST00000547764 F6X3S4 739 aa23.88■■□□□ 1.41
PRPF40B-206ENST00000547764 CCDC93Q567U6 631 aa23.88■■□□□ 1.41
PRPF40B-206ENST00000547764 SSH1Q8WYL5 1049 aa23.88■■□□□ 1.41
PRPF40B-206ENST00000547764 FER1L6Q2WGJ9 1857 aa23.87■■□□□ 1.41
PRPF40B-206ENST00000547764 ABCC4O15439 1325 aa23.87■■□□□ 1.41
PRPF40B-206ENST00000547764 LMNB1P20700 586 aa23.87■■□□□ 1.41
PRPF40B-206ENST00000547764 SF3B3Q15393 1217 aaKnown RBP23.87■■□□□ 1.41
PRPF40B-206ENST00000547764 TAOK3Q9H2K8 898 aa23.87■■□□□ 1.41
PRPF40B-206ENST00000547764 DDX46Q7L014 1031 aaKnown RBP23.86■■□□□ 1.41
PRPF40B-206ENST00000547764 LINS1Q8NG48 757 aa23.86■■□□□ 1.41
PRPF40B-206ENST00000547764 LTBP3Q9NS15 1303 aa23.85■■□□□ 1.41
PRPF40B-206ENST00000547764 PPEF1O14829 653 aaPredicted RBP23.85■■□□□ 1.41
PRPF40B-206ENST00000547764 CT47B1P0C2W7 299 aaPredicted RBP23.85■■□□□ 1.41
PRPF40B-206ENST00000547764 HSP90B1P14625 803 aaKnown RBP23.85■■□□□ 1.41
PRPF40B-206ENST00000547764 BCL2L13Q9BXK5 485 aa23.85■■□□□ 1.41
PRPF40B-206ENST00000547764 CDHR2Q9BYE9 1310 aa23.84■■□□□ 1.41
PRPF40B-206ENST00000547764 GCKRQ14397 625 aa23.84■■□□□ 1.41
PRPF40B-206ENST00000547764 ALDH1L2Q3SY69 923 aa23.84■■□□□ 1.41
PRPF40B-206ENST00000547764 SLC51AQ86UW1 340 aa23.84■■□□□ 1.41
PRPF40B-206ENST00000547764 RTKN2Q8IZC4 609 aa23.84■■□□□ 1.41
PRPF40B-206ENST00000547764 H7C1W4 665 aa23.83■■□□□ 1.41
PRPF40B-206ENST00000547764 PDE8AO60658 829 aa23.83■■□□□ 1.41
PRPF40B-206ENST00000547764 BBOX1O75936 387 aa23.83■■□□□ 1.41
PRPF40B-206ENST00000547764 GRAPQ13588 217 aa23.83■■□□□ 1.41
PRPF40B-206ENST00000547764 BEND3Q5T5X7 828 aa23.83■■□□□ 1.41
PRPF40B-206ENST00000547764 CC2D2BQ6DHV5 1058 aa23.83■■□□□ 1.41
PRPF40B-206ENST00000547764 GRAPLQ8TC17 118 aaPredicted RBP23.83■■□□□ 1.41
PRPF40B-206ENST00000547764 ZNF526Q8TF50 670 aaPredicted RBP23.83■■□□□ 1.41
PRPF40B-206ENST00000547764 FKBP4Q02790 459 aaKnown RBP eCLIP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms