RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 DICER1Q9UPY3 1922 aaKnown RBP34.31■■■■□ 3.08
SRSF9-202ENST00000546942 CCDC93Q567U6 631 aa34.3■■■■□ 3.08
SRSF9-202ENST00000546942 UTP14AQ9BVJ6 771 aaKnown RBP34.3■■■■□ 3.08
SRSF9-202ENST00000546942 ANKRD36CQ5JPF3 1778 aa34.3■■■■□ 3.08
SRSF9-202ENST00000546942 DBF4Q9UBU7 674 aaPredicted RBP34.29■■■■□ 3.08
SRSF9-202ENST00000546942 LTBP3Q9NS15 1303 aa34.29■■■■□ 3.08
SRSF9-202ENST00000546942 CEP350Q5VT06 3117 aa34.28■■■■□ 3.08
SRSF9-202ENST00000546942 GLTPD2A6NH11 291 aa34.28■■■■□ 3.08
SRSF9-202ENST00000546942 CRY2Q49AN0 593 aa34.28■■■■□ 3.08
SRSF9-202ENST00000546942 HSP90AB3PQ58FF7 597 aa34.28■■■■□ 3.08
SRSF9-202ENST00000546942 ZNF428Q96B54 188 aa34.28■■■■□ 3.08
SRSF9-202ENST00000546942 HSPA6P17066 643 aa34.26■■■■□ 3.08
SRSF9-202ENST00000546942 TCIRG1Q13488 830 aa34.26■■■■□ 3.08
SRSF9-202ENST00000546942 C3orf67Q6ZVT6 689 aa34.25■■■■□ 3.07
SRSF9-202ENST00000546942 ANKRD13DQ6ZTN6 518 aa34.24■■■■□ 3.07
SRSF9-202ENST00000546942 NLRP10Q86W26 655 aa34.24■■■■□ 3.07
SRSF9-202ENST00000546942 HYPKQ9NX55 129 aa34.24■■■■□ 3.07
SRSF9-202ENST00000546942 RIC1Q4ADV7 1423 aa34.23■■■■□ 3.07
SRSF9-202ENST00000546942 DPY19L2Q6NUT2 758 aa34.23■■■■□ 3.07
SRSF9-202ENST00000546942 C8orf58Q8NAV2 365 aa34.23■■■■□ 3.07
SRSF9-202ENST00000546942 RBM17Q96I25 401 aaKnown RBP34.23■■■■□ 3.07
SRSF9-202ENST00000546942 NLRP3Q96P20 1036 aa34.23■■■■□ 3.07
SRSF9-202ENST00000546942 TCERG1O14776 1098 aaKnown RBP34.22■■■■□ 3.07
SRSF9-202ENST00000546942 PLBD2Q8NHP8 589 aa34.22■■■■□ 3.07
SRSF9-202ENST00000546942 TRMT112Q9UI30 125 aaKnown RBP34.22■■■■□ 3.07
SRSF9-202ENST00000546942 HOXA10P31260 410 aaPredicted RBP34.21■■■■□ 3.07
SRSF9-202ENST00000546942 FKBP4Q02790 459 aaKnown RBP eCLIP34.21■■■■□ 3.07
SRSF9-202ENST00000546942 RTKN2Q8IZC4 609 aa34.21■■■■□ 3.07
SRSF9-202ENST00000546942 SYNE4Q8N205 404 aa34.21■■■■□ 3.07
SRSF9-202ENST00000546942 ZNF277Q9NRM2 450 aaPredicted RBP34.21■■■■□ 3.07
SRSF9-202ENST00000546942 HCLS1P14317 486 aaPredicted RBP34.19■■■■□ 3.06
SRSF9-202ENST00000546942 SLC10A5Q5PT55 438 aa34.19■■■■□ 3.06
SRSF9-202ENST00000546942 RBM46Q8TBY0 533 aaKnown RBP34.19■■■■□ 3.06
SRSF9-202ENST00000546942 TSR2Q969E8 191 aaKnown RBP34.19■■■■□ 3.06
SRSF9-202ENST00000546942 SALL2Q9Y467 1007 aaPredicted RBP34.18■■■■□ 3.06
SRSF9-202ENST00000546942 ATP5J2-PTCD1G3V325 749 aa34.17■■■■□ 3.06
SRSF9-202ENST00000546942 VEGFAP15692 232 aaPredicted RBP34.17■■■■□ 3.06
SRSF9-202ENST00000546942 WWC1Q8IX03 1113 aa34.17■■■■□ 3.06
SRSF9-202ENST00000546942 CRAMP1Q96RY5 1269 aa34.17■■■■□ 3.06
SRSF9-202ENST00000546942 CCDC27Q2M243 656 aa34.16■■■■□ 3.06
SRSF9-202ENST00000546942 PHAXQ9H814 394 aaKnown RBP34.16■■■■□ 3.06
SRSF9-202ENST00000546942 LAMB2P55268 1798 aa34.16■■■■□ 3.06
SRSF9-202ENST00000546942 RNF123Q5XPI4 1314 aa34.15■■■■□ 3.06
SRSF9-202ENST00000546942 PPEF1O14829 653 aaPredicted RBP34.15■■■■□ 3.06
SRSF9-202ENST00000546942 SH3TC1Q8TE82 1336 aa34.14■■■■□ 3.06
SRSF9-202ENST00000546942 RIC3Q7Z5B4 369 aa34.14■■■■□ 3.06
SRSF9-202ENST00000546942 SLC51AQ86UW1 340 aa34.14■■■■□ 3.06
SRSF9-202ENST00000546942 TSPYL6Q8N831 410 aa34.14■■■■□ 3.06
SRSF9-202ENST00000546942 DDNO94850 711 aaPredicted RBP34.13■■■■□ 3.05
SRSF9-202ENST00000546942 GOLGA2Q08379 1002 aa34.12■■■■□ 3.05
SRSF9-202ENST00000546942 WDR90Q96KV7 1748 aa34.11■■■■□ 3.05
SRSF9-202ENST00000546942 IARSP41252 1262 aaKnown RBP34.11■■■■□ 3.05
SRSF9-202ENST00000546942 CCDC30Q5VVM6 783 aa34.11■■■■□ 3.05
SRSF9-202ENST00000546942 CC2D2BQ6DHV5 1058 aa34.11■■■■□ 3.05
SRSF9-202ENST00000546942 ISCA1Q9BUE6 129 aa34.11■■■■□ 3.05
SRSF9-202ENST00000546942 POTECB2RU33 542 aa34.1■■■■□ 3.05
SRSF9-202ENST00000546942 RTL5Q5HYW3 569 aaPredicted RBP34.1■■■■□ 3.05
SRSF9-202ENST00000546942 FAM9BQ8IZU0 186 aa34.1■■■■□ 3.05
SRSF9-202ENST00000546942 FAM89AQ96GI7 184 aa34.1■■■■□ 3.05
SRSF9-202ENST00000546942 ABCC4O15439 1325 aa34.09■■■■□ 3.05
SRSF9-202ENST00000546942 FSTL1Q12841 308 aa34.09■■■■□ 3.05
SRSF9-202ENST00000546942 PSMD1Q99460 953 aa34.09■■■■□ 3.05
SRSF9-202ENST00000546942 TMX4Q9H1E5 349 aaPredicted RBP34.09■■■■□ 3.05
SRSF9-202ENST00000546942 APLP1P51693 650 aa34.08■■■■□ 3.05
SRSF9-202ENST00000546942 SMC1BQ8NDV3 1235 aa34.07■■■■□ 3.04
SRSF9-202ENST00000546942 CHMP4AQ9BY43 222 aa34.07■■■■□ 3.04
SRSF9-202ENST00000546942 TAF1P21675 1872 aa34.07■■■■□ 3.04
SRSF9-202ENST00000546942 SNED1Q8TER0 1413 aa34.06■■■■□ 3.04
SRSF9-202ENST00000546942 DDX46Q7L014 1031 aaKnown RBP34.06■■■■□ 3.04
SRSF9-202ENST00000546942 MYD88Q99836 296 aa34.06■■■■□ 3.04
SRSF9-202ENST00000546942 DDX60Q8IY21 1712 aaKnown RBP34.06■■■■□ 3.04
SRSF9-202ENST00000546942 ZNF541Q9H0D2 1346 aa34.04■■■■□ 3.04
SRSF9-202ENST00000546942 JDP2Q8WYK2 163 aa34.04■■■■□ 3.04
SRSF9-202ENST00000546942 ATP6V0A2Q9Y487 856 aa34.04■■■■□ 3.04
SRSF9-202ENST00000546942 IL16Q14005 1332 aa34.04■■■■□ 3.04
SRSF9-202ENST00000546942 TWISTNBQ3B726 338 aaPredicted RBP34.03■■■■□ 3.04
SRSF9-202ENST00000546942 GRIPAP1Q4V328 841 aa34.03■■■■□ 3.04
SRSF9-202ENST00000546942 DDX58O95786 925 aaKnown RBP34.02■■■■□ 3.04
SRSF9-202ENST00000546942 STK31Q9BXU1 1019 aa34.02■■■■□ 3.04
SRSF9-202ENST00000546942 BBOX1O75936 387 aa34.01■■■■□ 3.03
SRSF9-202ENST00000546942 TRIM28Q13263 835 aaKnown RBP34.01■■■■□ 3.03
SRSF9-202ENST00000546942 NCBP3Q53F19 620 aaKnown RBP34.01■■■■□ 3.03
SRSF9-202ENST00000546942 LARGE2Q8N3Y3 721 aa34■■■■□ 3.03
SRSF9-202ENST00000546942 FZD9O00144 591 aa33.99■■■■□ 3.03
SRSF9-202ENST00000546942 IRS4O14654 1257 aaPredicted RBP33.99■■■■□ 3.03
SRSF9-202ENST00000546942 GRAPQ13588 217 aa33.99■■■■□ 3.03
SRSF9-202ENST00000546942 GRAPLQ8TC17 118 aaPredicted RBP33.99■■■■□ 3.03
SRSF9-202ENST00000546942 HTRA3P83110 453 aa33.98■■■■□ 3.03
SRSF9-202ENST00000546942 MAP3K2Q9Y2U5 619 aa33.98■■■■□ 3.03
SRSF9-202ENST00000546942 FANCIQ9NVI1 1328 aa33.98■■■■□ 3.03
SRSF9-202ENST00000546942 WDR63Q8IWG1 891 aa33.97■■■■□ 3.03
SRSF9-202ENST00000546942 SP8Q8IXZ3 490 aa33.97■■■■□ 3.03
SRSF9-202ENST00000546942 METTL22Q9BUU2 404 aaPredicted RBP33.97■■■■□ 3.03
SRSF9-202ENST00000546942 COL4A5P29400 1685 aa33.96■■■■□ 3.03
SRSF9-202ENST00000546942 JARID2Q92833 1246 aaPredicted RBP33.96■■■■□ 3.03
SRSF9-202ENST00000546942 IQCA1LA6NCM1 817 aa33.95■■■■□ 3.03
SRSF9-202ENST00000546942 PPIP5K2O43314 1243 aa33.95■■■■□ 3.03
SRSF9-202ENST00000546942 POTEIP0CG38 1075 aa33.95■■■■□ 3.03
SRSF9-202ENST00000546942 POTEJP0CG39 1038 aa33.95■■■■□ 3.03
SRSF9-202ENST00000546942 DPP8Q6V1X1 898 aaPredicted RBP33.95■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms