RNA–Protein interactions for RNA: ENST00000546309.6

KDM1B-203, Transcript of lysine demethylase 1B, humanhuman

TSL 1 (best) BASIC

Gene KDM1B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-203ENST00000546309 TWISTNBQ3B726 338 aaPredicted RBP9.85□□□□□ -0.83
KDM1B-203ENST00000546309 TTLL7Q6ZT98 887 aa9.85□□□□□ -0.83
KDM1B-203ENST00000546309 KLRG1Q96E93 195 aa9.85□□□□□ -0.83
KDM1B-203ENST00000546309 BRIP1Q9BX63 1249 aa9.85□□□□□ -0.83
KDM1B-203ENST00000546309 LTBP1Q14766 1721 aa9.85□□□□□ -0.83
KDM1B-203ENST00000546309 UBN2Q6ZU65 1347 aa9.84□□□□□ -0.83
KDM1B-203ENST00000546309 C21orf2O43822 256 aa9.84□□□□□ -0.83
KDM1B-203ENST00000546309 STARD3NLO95772 234 aa9.84□□□□□ -0.83
KDM1B-203ENST00000546309 EIF4A1P60842 406 aaKnown RBP9.84□□□□□ -0.83
KDM1B-203ENST00000546309 KRT24Q2M2I5 525 aa9.84□□□□□ -0.83
KDM1B-203ENST00000546309 PROSER3Q2NL68 480 aa9.84□□□□□ -0.83
KDM1B-203ENST00000546309 DZIP3Q86Y13 1208 aaKnown RBP9.84□□□□□ -0.83
KDM1B-203ENST00000546309 MRPL50Q8N5N7 158 aaKnown RBP9.84□□□□□ -0.83
KDM1B-203ENST00000546309 TTLL6Q8N841 843 aa9.84□□□□□ -0.83
KDM1B-203ENST00000546309 C8orf58Q8NAV2 365 aa9.84□□□□□ -0.83
KDM1B-203ENST00000546309 SMC1BQ8NDV3 1235 aa9.84□□□□□ -0.83
KDM1B-203ENST00000546309 EXOC6Q8TAG9 804 aa9.84□□□□□ -0.83
KDM1B-203ENST00000546309 ZNF219Q9P2Y4 722 aaPredicted RBP9.84□□□□□ -0.83
KDM1B-203ENST00000546309 LAS1LQ9Y4W2 734 aaKnown RBP9.84□□□□□ -0.83
KDM1B-203ENST00000546309 ADAMTSL1Q8N6G6 1762 aa9.83□□□□□ -0.84
KDM1B-203ENST00000546309 CACNA1FO60840 1977 aa9.83□□□□□ -0.84
KDM1B-203ENST00000546309 ATF7IPQ6VMQ6 1270 aa9.83□□□□□ -0.84
KDM1B-203ENST00000546309 TNS4Q8IZW8 715 aa9.83□□□□□ -0.84
KDM1B-203ENST00000546309 TSPYL6Q8N831 410 aa9.83□□□□□ -0.84
KDM1B-203ENST00000546309 CRBNQ96SW2 442 aa9.83□□□□□ -0.84
KDM1B-203ENST00000546309 SMC4Q9NTJ3 1288 aa9.83□□□□□ -0.84
KDM1B-203ENST00000546309 TSPYL4Q9UJ04 414 aa9.83□□□□□ -0.84
KDM1B-203ENST00000546309 ZNF330Q9Y3S2 320 aaPredicted RBP9.83□□□□□ -0.84
KDM1B-203ENST00000546309 LAMB2P55268 1798 aa9.83□□□□□ -0.84
KDM1B-203ENST00000546309 GLTPD2A6NH11 291 aa9.82□□□□□ -0.84
KDM1B-203ENST00000546309 ANXA1P04083 346 aa9.82□□□□□ -0.84
KDM1B-203ENST00000546309 SNRPA1P09661 255 aaKnown RBP9.82□□□□□ -0.84
KDM1B-203ENST00000546309 C20orf194Q5TEA3 1177 aa9.82□□□□□ -0.84
KDM1B-203ENST00000546309 TTC5Q8N0Z6 440 aa9.82□□□□□ -0.84
KDM1B-203ENST00000546309 SYNE4Q8N205 404 aa9.82□□□□□ -0.84
KDM1B-203ENST00000546309 LMNB1P20700 586 aa9.81□□□□□ -0.84
KDM1B-203ENST00000546309 PRPF40BQ6NWY9 871 aaKnown RBP9.81□□□□□ -0.84
KDM1B-203ENST00000546309 DZIP1LQ8IYY4 767 aaKnown RBP9.81□□□□□ -0.84
KDM1B-203ENST00000546309 CCDC136Q96JN2 1154 aa9.81□□□□□ -0.84
KDM1B-203ENST00000546309 TEX13AQ9BXU3 409 aaPredicted RBP9.81□□□□□ -0.84
KDM1B-203ENST00000546309 CHMP4BQ9H444 224 aaKnown RBP9.81□□□□□ -0.84
KDM1B-203ENST00000546309 NOB1Q9ULX3 412 aaKnown RBP9.81□□□□□ -0.84
KDM1B-203ENST00000546309 LTBP3Q9NS15 1303 aa9.81□□□□□ -0.84
KDM1B-203ENST00000546309 A0A087WZG4 1122 aa9.8□□□□□ -0.84
KDM1B-203ENST00000546309 H0YIN7 160 aa9.8□□□□□ -0.84
KDM1B-203ENST00000546309 NPHP1O15259 732 aa9.8□□□□□ -0.84
KDM1B-203ENST00000546309 DDNO94850 711 aaPredicted RBP9.8□□□□□ -0.84
KDM1B-203ENST00000546309 TRIM27P14373 513 aa9.8□□□□□ -0.84
KDM1B-203ENST00000546309 VEGFAP15692 232 aaPredicted RBP9.8□□□□□ -0.84
KDM1B-203ENST00000546309 CRY2Q49AN0 593 aa9.8□□□□□ -0.84
KDM1B-203ENST00000546309 COL13A1Q5TAT6 717 aaPredicted RBP9.8□□□□□ -0.84
KDM1B-203ENST00000546309 NUTM1Q86Y26 1132 aa9.8□□□□□ -0.84
KDM1B-203ENST00000546309 JMYQ8N9B5 988 aa9.8□□□□□ -0.84
KDM1B-203ENST00000546309 ZNF622Q969S3 477 aaKnown RBP eCLIP9.8□□□□□ -0.849e-8■□□□□ 8.9
KDM1B-203ENST00000546309 API5Q9BZZ5 524 aaKnown RBP9.8□□□□□ -0.84
KDM1B-203ENST00000546309 PTPRCP08575 1304 aa9.8□□□□□ -0.84
KDM1B-203ENST00000546309 ZNF541Q9H0D2 1346 aa9.8□□□□□ -0.84
KDM1B-203ENST00000546309 ZC3H4Q9UPT8 1303 aaKnown RBP9.8□□□□□ -0.84
KDM1B-203ENST00000546309 MVPQ14764 893 aaKnown RBP9.79□□□□□ -0.84
KDM1B-203ENST00000546309 ERFEQ4G0M1 354 aa9.79□□□□□ -0.84
KDM1B-203ENST00000546309 SUSD4Q5VX71 490 aa9.79□□□□□ -0.84
KDM1B-203ENST00000546309 STYK1Q6J9G0 422 aa9.79□□□□□ -0.84
KDM1B-203ENST00000546309 CLEC4GQ6UXB4 293 aa9.79□□□□□ -0.84
KDM1B-203ENST00000546309 NPM2Q86SE8 214 aaKnown RBP9.79□□□□□ -0.84
KDM1B-203ENST00000546309 ZNF34Q8IZ26 560 aa9.79□□□□□ -0.84
KDM1B-203ENST00000546309 CNBD1Q8NA66 436 aa9.79□□□□□ -0.84
KDM1B-203ENST00000546309 FRAT1Q92837 279 aaPredicted RBP9.79□□□□□ -0.84
KDM1B-203ENST00000546309 SETDB2Q96T68 719 aa9.79□□□□□ -0.84
KDM1B-203ENST00000546309 DDX19BQ9UMR2 479 aa9.79□□□□□ -0.84
KDM1B-203ENST00000546309 FAM177BA6PVY3 158 aa9.78□□□□□ -0.84
KDM1B-203ENST00000546309 NTSR2O95665 410 aa9.78□□□□□ -0.84
KDM1B-203ENST00000546309 RLBP1P12271 317 aa9.78□□□□□ -0.84
KDM1B-203ENST00000546309 FMR1Q06787 632 aaKnown RBP eCLIP9.78□□□□□ -0.847e-6■■□□□ 12.8
KDM1B-203ENST00000546309 CCDC30Q5VVM6 783 aa9.78□□□□□ -0.84
KDM1B-203ENST00000546309 B4GALNT3Q6L9W6 998 aa9.78□□□□□ -0.84
KDM1B-203ENST00000546309 DPY19L2Q6NUT2 758 aa9.78□□□□□ -0.84
KDM1B-203ENST00000546309 PANK1Q8TE04 598 aa9.78□□□□□ -0.84
KDM1B-203ENST00000546309 CLUAP1Q96AJ1 413 aa9.78□□□□□ -0.84
KDM1B-203ENST00000546309 BCL2L13Q9BXK5 485 aa9.78□□□□□ -0.84
KDM1B-203ENST00000546309 NIP7Q9Y221 180 aaKnown RBP eCLIP9.78□□□□□ -0.84
KDM1B-203ENST00000546309 ABCC4O15439 1325 aa9.78□□□□□ -0.84
KDM1B-203ENST00000546309 ELL2O00472 640 aaPredicted RBP9.77□□□□□ -0.85
KDM1B-203ENST00000546309 PDE6BP35913 854 aa9.77□□□□□ -0.85
KDM1B-203ENST00000546309 FTSJ3Q8IY81 847 aaKnown RBP9.77□□□□□ -0.85
KDM1B-203ENST00000546309 COG6Q9Y2V7 657 aa9.77□□□□□ -0.85
KDM1B-203ENST00000546309 MAP3K15Q6ZN16 1313 aa9.77□□□□□ -0.85
KDM1B-203ENST00000546309 DDX60Q8IY21 1712 aaKnown RBP9.76□□□□□ -0.85
KDM1B-203ENST00000546309 DUOX1Q9NRD9 1551 aa9.76□□□□□ -0.85
KDM1B-203ENST00000546309 ANKRD36CQ5JPF3 1778 aa9.76□□□□□ -0.85
KDM1B-203ENST00000546309 RGL2O15211 777 aa9.76□□□□□ -0.85
KDM1B-203ENST00000546309 ITGBL1O95965 494 aaPredicted RBP9.76□□□□□ -0.85
KDM1B-203ENST00000546309 HSPA1AP0DMV8 641 aaKnown RBP9.76□□□□□ -0.85
KDM1B-203ENST00000546309 HSPA1BP0DMV9 641 aaKnown RBP9.76□□□□□ -0.85
KDM1B-203ENST00000546309 GPTP24298 496 aa9.76□□□□□ -0.85
KDM1B-203ENST00000546309 INTS3Q68E01 1043 aaKnown RBP9.76□□□□□ -0.85
KDM1B-203ENST00000546309 MASTLQ96GX5 879 aa9.76□□□□□ -0.85
KDM1B-203ENST00000546309 STK31Q9BXU1 1019 aa9.76□□□□□ -0.85
KDM1B-203ENST00000546309 ZBTB3Q9H5J0 574 aa9.76□□□□□ -0.85
KDM1B-203ENST00000546309 ZNF277Q9NRM2 450 aaPredicted RBP9.76□□□□□ -0.85
KDM1B-203ENST00000546309 PASKQ96RG2 1323 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms